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5N7P
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BU of 5n7p by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 3-amino-5-(pyrrolidin-1-yl)-1H-pyrazole-4-carbonitrile
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-azanyl-3-pyrrolidin-1-yl-1~{H}-pyrazole-4-carbonitrile, cAMP dependent protein kinase inhibitor alpha-like protein, ...
著者Siefker, C, Heine, A, Klebe, G.
登録日2017-02-21
公開日2018-03-14
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献A crystallographic fragment study with cAMP-dependent protein kinase A
To be published
9IWW
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BU of 9iww by Molmil
Crystal structure of the mouse RIP3 kinase domain in complexed with GSK'872
分子名称: Receptor-interacting serine/threonine-protein kinase 3, ~{N}-(6-propan-2-ylsulfonylquinolin-4-yl)-1,3-benzothiazol-5-amine
著者Xie, H, Su, H.X, Li, M.J, Xu, Y.C.
登録日2024-07-26
公開日2025-05-07
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structure-based design of potent and selective inhibitors targeting RIPK3 for eliminating on-target toxicity in vitro.
Nat Commun, 16, 2025
9IX2
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BU of 9ix2 by Molmil
Crystal structure of the mouse RIP3 kinase domain in complexed with TAK-632
分子名称: N-{7-cyano-6-[4-fluoro-3-({[3-(trifluoromethyl)phenyl]acetyl}amino)phenoxy]-1,3-benzothiazol-2-yl}cyclopropanecarboxamide, Receptor-interacting serine/threonine-protein kinase 3
著者Xie, H, Su, H.X, Li, M.J, Xu, Y.C.
登録日2024-07-26
公開日2025-05-07
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structure-based design of potent and selective inhibitors targeting RIPK3 for eliminating on-target toxicity in vitro.
Nat Commun, 16, 2025
5HXP
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BU of 5hxp by Molmil
Crystal Structure of Z,Z-Farnesyl Diphosphate Synthase (D71M, E75A and H103Y Mutants) Complexed with IPP
分子名称: (2Z,6Z)-farnesyl diphosphate synthase, chloroplastic, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, ...
著者Lee, C.C, Chan, Y.T, Wang, A.H.J.
登録日2016-01-31
公開日2017-04-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure and Potential Head-to-Middle Condensation Function of aZ,Z-Farnesyl Diphosphate Synthase.
Acs Omega, 2, 2017
9IWX
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BU of 9iwx by Molmil
Crystal structure of the mouse RIP3 kinase domain(R69H) in complexed with GSK'872
分子名称: Receptor-interacting serine/threonine-protein kinase 3, ~{N}-(6-propan-2-ylsulfonylquinolin-4-yl)-1,3-benzothiazol-5-amine
著者Xie, H, Su, H.X, Li, M.J, Xu, Y.C.
登録日2024-07-26
公開日2025-05-07
最終更新日2025-05-21
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure-based design of potent and selective inhibitors targeting RIPK3 for eliminating on-target toxicity in vitro.
Nat Commun, 16, 2025
5NK8
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BU of 5nk8 by Molmil
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 2f
分子名称: Ephrin type-A receptor 2, ~{N}-(2-chloranyl-6-methyl-phenyl)-2-[[3-[(2,2,6,6-tetramethyl-1-oxidanyl-piperidin-4-yl)carbamoyl]phenyl]amino]-1,3-thiazole-5-carboxamide
著者Kudlinzki, D, Linhard, V.L, Witt, K, Gande, S.L, Saxena, K, Heinzlmeir, S, Medard, G, Kuester, B, Schwalbe, H.
登録日2017-03-31
公開日2017-06-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.761 Å)
主引用文献Chemoproteomics-Aided Medicinal Chemistry for the Discovery of EPHA2 Inhibitors.
ChemMedChem, 12, 2017
5NKG
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BU of 5nkg by Molmil
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 3d
分子名称: Ephrin type-A receptor 2, ~{N}-(2-chloranyl-6-methyl-phenyl)-2-[[3-ethyl-5-(piperidin-4-ylcarbamoyl)phenyl]amino]-1,3-thiazole-5-carboxamide
著者Kudlinzki, D, Linhard, V.L, Witt, K, Gande, S.L, Saxena, K, Heinzlmeir, S, Medard, G, Kuester, B, Schwalbe, H.
登録日2017-03-31
公開日2017-06-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Chemoproteomics-Aided Medicinal Chemistry for the Discovery of EPHA2 Inhibitors.
ChemMedChem, 12, 2017
8DWR
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BU of 8dwr by Molmil
Crystal structure of the L333V variant of catalase-peroxidase from Mycobacterium tuberculosis
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Diaz-Vilchis, A, Uribe-Vazquez, B, Avila-Linares, A, Rudino-Pinera, E, Soberon, X.
登録日2022-08-01
公開日2023-08-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Characterization of a catalase-peroxidase variant (L333V-KatG) identified in an INH-resistant Mycobacterium tuberculosis clinical isolate.
Biochem Biophys Rep, 37, 2024
5KSG
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BU of 5ksg by Molmil
Crystal structure of the W153F variant of catalase-peroxidase from B. pseudomallei treated with isoniazid
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ...
著者Loewen, P.C.
登録日2016-07-08
公開日2017-07-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Structure of the W153 variant of catalase-peroxidase of B. pseudomallei at 1.62 Angstroms.
To be published
5LVO
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BU of 5lvo by Molmil
Human PDK1 Kinase Domain in Complex with Allosteric Compound PSE10 Bound to the PIF-Pocket
分子名称: 2-oxidanylidenepropyl ~{N}-(2-chloranyl-6-fluoranyl-phenyl)carbonyl-~{N}'-(4-chlorophenyl)carbamimidothioate, 3-phosphoinositide-dependent protein kinase 1, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Schulze, J.O, Saladino, G, Busschots, K, Neimanis, S, Suess, E, Odadzic, D, Zeuzem, S, Hindie, V, Herbrand, A.K, Lisa, M.N, Alzari, P.M, Gervasio, F.L, Biondi, R.M.
登録日2016-09-14
公開日2016-10-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Bidirectional Allosteric Communication between the ATP-Binding Site and the Regulatory PIF Pocket in PDK1 Protein Kinase.
Cell Chem Biol, 23, 2016
9RF5
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BU of 9rf5 by Molmil
M. tuberculosis meets European Lead Factory: identification and structural characterization of novel Rv0183 inhibitors using X-ray crystallography: ELF8
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
著者Riegler-Berket, L, Goedl, L, Oberer, M, Polidori, N.
登録日2025-06-04
公開日2025-08-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献M. tuberculosis meets European Lead Factory: identification and structural characterization of novel Rv0183 inhibitors using X-ray crystallography
To Be Published
8BP6
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BU of 8bp6 by Molmil
Structure of MHC-class I related molecule MR1 with bound M3Ade.
分子名称: (1R,5S)-8-(9H-purin-6-yl)-2-oxa-8-azabicyclo[3.3.1]nona-3,6-diene-4,6-dicarbaldehyde, Beta-2-microglobulin,Major histocompatibility complex class I-related gene protein
著者Berloffa, G, Jakob, R.P, Maier, T.
登録日2022-11-16
公開日2023-11-29
最終更新日2025-02-05
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The carbonyl nucleobase adduct M 3 Ade is a potent antigen for adaptive polyclonal MR1-restricted T cells.
Immunity, 2024
6HCY
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BU of 6hcy by Molmil
human STEAP4 bound to NADP, FAD, heme and Fe(III)-NTA.
分子名称: (2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Oosterheert, W, van Bezouwen, L.S, Rodenburg, R.N.P, Forster, F, Mattevi, A, Gros, P.
登録日2018-08-17
公開日2018-10-24
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structures of human STEAP4 reveal mechanism of iron(III) reduction.
Nat Commun, 9, 2018
6DWQ
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BU of 6dwq by Molmil
Subtilisin serine protease modified with the protease inhibitor cyanobenzylsulfonylfluoride
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, KerA, ...
著者Luo, M, Eaton, C.N, Phillips-Piro, C.M.
登録日2018-06-27
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Paired Spectroscopic and Crystallographic Studies of Protease Active Sites
Chemistryselect, 4, 2019
5JGM
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BU of 5jgm by Molmil
tRNA guanine Transglycosylase (TGT) in co-crystallized complex with ethyl (2-(methylamino)-8-oxo-7,8-dihydro-1H-imidazo[4,5-g]quinazolin-6-yl)carbamate
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Ehrmann, F.R, Nguyen, D, Heine, A, Klebe, G.
登録日2016-04-20
公開日2017-05-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Carbamate-protected lin-Benzoguanines as promising candidates for improving solubility and membrane permeability
To be Published
8CMS
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BU of 8cms by Molmil
OTUB2 in covalent complex with LN5P45
分子名称: (1~{S},2~{S})-~{N}'-ethanoyl-2-(3-methylphenyl)cyclopropane-1-carbohydrazide, Ubiquitin thioesterase OTUB2
著者Gan, J, de Vries, J.
登録日2023-02-21
公開日2023-11-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Cellular Validation of a Chemically Improved Inhibitor Identifies Monoubiquitination on OTUB2.
Acs Chem.Biol., 18, 2023
9HKP
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BU of 9hkp by Molmil
Protein kinase CK2 with small molecule ligands
分子名称: Casein kinase II subunit alpha, SULFATE ION, [1-[2-[[4-(2-methylpropyl)phenyl]sulfonylamino]ethyl]piperidin-4-yl]methyl 1~{H}-indole-3-carboxylate
著者Krimm, I, Gelin, M, Guichou, J.F.
登録日2024-12-03
公開日2025-07-30
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Binding-Site Switch for Protein Kinase CK2 Inhibitors.
Chemmedchem, 20, 2025
7BSR
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BU of 7bsr by Molmil
Mandelate oxidase with the 2-Hydroxy-3-oxosuccinic acid
分子名称: (2~{S})-2-oxidanyl-3-oxidanylidene-butanedioic acid, 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, 4-hydroxymandelate oxidase
著者Li, T.L, Lin, K.H.
登録日2020-03-31
公開日2020-07-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.894 Å)
主引用文献Structural and chemical trapping of flavin-oxide intermediates reveals substrate-directed reaction multiplicity.
Protein Sci., 29, 2020
8YJI
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BU of 8yji by Molmil
Room temperature structure of xylanase from Trichoderma longibrachiatum
分子名称: Endo-1,4-beta-xylanase
著者Nam, K.H.
登録日2024-03-02
公開日2024-03-13
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Temperature-dependent structural changes in xylanase II from Trichoderma longibrachiatum.
Carbohydr.Res., 541, 2024
6PKH
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BU of 6pkh by Molmil
Zebrafish N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (NAGPA) catalytic domain auto-inhibited by pro-peptide
分子名称: N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Gorelik, A, Illes, K, Nagar, B.
登録日2019-06-29
公開日2020-02-19
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of the Mannose-6-Phosphate Uncovering Enzyme.
Structure, 28, 2020
6V33
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BU of 6v33 by Molmil
X-ray structure of a sugar N-formyltransferase from Pseudomonas congelans
分子名称: 1,2-ETHANEDIOL, FOLIC ACID, dTDP-4-amino-4,6-dideoxyglucose, ...
著者Girardi, N.M, Thoden, J.B, Holden, H.M.
登録日2019-11-25
公開日2020-01-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Misannotations of the genes encoding sugar N-formyltransferases.
Protein Sci., 29, 2020
2GKD
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BU of 2gkd by Molmil
Structural insight into self-sacrifice mechanism of enediyne resistance
分子名称: 5'-D(*CP*TP*AP*TP*CP*AP*TP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*AP*TP*GP*AP*TP*AP*G)-3', CalC
著者Singh, S, Thorson, J.S.
登録日2006-04-01
公開日2006-08-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural insight into the self-sacrifice mechanism of enediyne resistance.
Acs Chem.Biol., 1, 2006
8YJJ
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BU of 8yjj by Molmil
Crystal structure of xylanase from Trichoderma longibrachiatum
分子名称: Endo-1,4-beta-xylanase
著者Nam, K.H.
登録日2024-03-02
公開日2024-03-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Temperature-dependent structural changes in xylanase II from Trichoderma longibrachiatum.
Carbohydr.Res., 541, 2024
5KSN
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BU of 5ksn by Molmil
Crystal structure of the S324G variant of catalase-peroxidase from B. pseudomallei with INH bound
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ...
著者Loewen, P.C.
登録日2016-07-08
公開日2017-07-12
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structure of the S324G variant of catalase-peroxidase of B. pseudomallei treated with isoniazid at 1.87 Angstroms.
To be published
7S76
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BU of 7s76 by Molmil
HBV CAPSID Y132A WITH COMPOUND 10b AT 2.5A RESOLUTION
分子名称: (1-methyl-1H-1,2,4-triazol-3-yl)methyl {(4S)-1-[(3-chloro-4-fluorophenyl)carbamoyl]-2-methyl-2,4,5,6-tetrahydrocyclopenta[c]pyrrol-4-yl}carbamate, Capsid protein
著者Olland, A.M, Suto, R.K.
登録日2021-09-15
公開日2022-05-04
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The identification of highly efficacious functionalised tetrahydrocyclopenta[ c ]pyrroles as inhibitors of HBV viral replication through modulation of HBV capsid assembly.
Rsc Med Chem, 13, 2022

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