PDB: 82129 件ウェブページステータス検索Chemie searchBIRD

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8HRY	Cryo-EM structure of human NTCP-myr-preS1-YN9016Fab complex 分子名称: Fab heavy chain from antibody IgG clone number YN9016, Fab light chain from antibody IgG clone number YN9016, Large S protein (Fragment), ... 著者 Asami, J, Shimizu, T, Ohto, U. 登録日 2022-12-16 公開日 2024-01-17 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (3.11 Å) 主引用文献 Structural basis of hepatitis B virus receptor binding. Nat.Struct.Mol.Biol., 31, 2024
8HRX	Cryo-EM structure of human NTCP-myr-preS1-YN9048Fab complex 分子名称: Fab heavy chain from antibody IgG clone number YN9048, Fab light chain from antibody IgG clone number YN9048, PreS1 protein (Fragment), ... 著者 Asami, J, Shimizu, T, Ohto, U. 登録日 2022-12-16 公開日 2024-01-17 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 Structural basis of hepatitis B virus receptor binding. Nat.Struct.Mol.Biol., 31, 2024
8HRT	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 (L36S/T37K/F100V/P192S) in complex with NADP 分子名称: 1,2-ETHANEDIOL, GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase, ... 著者 Son, H.F, Kim, K.J. 登録日 2022-12-15 公開日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
8HRS	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 (L36S/T37K/P192S) in complex with NADP 分子名称: GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Son, H.F, Kim, K.J. 登録日 2022-12-15 公開日 2023-12-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
8HRQ	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 (L36S/T37K) in complex with NAD 分子名称: 1,2-ETHANEDIOL, CESIUM ION, GLYCEROL, ... 著者 Son, H.F, Kim, K.J. 登録日 2022-12-15 公開日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
8HRP	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 in complex with NAD and G3P 分子名称: 1,2-ETHANEDIOL, GLYCERALDEHYDE-3-PHOSPHATE, GLYCEROL, ... 著者 Son, H.F, Kim, K.J. 登録日 2022-12-15 公開日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
8HRH	SN-131/1B2 anti-MUC1 antibody with a glycopeptide 分子名称: 1-ACETYL-L-PROLINE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ALANINE, ... 著者 Wakui, H, Horidome, C, Yao, M, Ose, T, Nishimura, S.-I. 登録日 2022-12-15 公開日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Structural and molecular insight into antibody recognition of dynamic neoepitopes in membrane tethered MUC1 of pancreatic cancer cells and secreted exosomes. Rsc Chem Biol, 4, 2023
8HRG	Tail tube of DT57C bacteriophage in the full state 分子名称: Tail tube protein 著者 Ayala, R, Moiseenko, A.V, Chen, T.H, Kulikov, E.E, Golomidova, A.K, Orekhov, P.S, Street, M.A, Sokolova, O.S, Letarov, A.V, Wolf, M. 登録日 2022-12-15 公開日 2023-12-13 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Nearly complete structure of bacteriophage DT57C reveals architecture of head-to-tail interface and lateral tail fibers. Nat Commun, 14, 2023
8HRF	Catalytic domain of Vibrio parahaemolyticus chitinase 1 分子名称: ACETATE ION, CALCIUM ION, Chitinase 著者 Nakamura, A. 登録日 2022-12-15 公開日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Catalytic domain of Vibrio parahaemolyticus chitinase 1 To Be Published
8HRE	Straight fiber of DT57C bacteriophage in the full state 分子名称: Central straight fiber 著者 Ayala, R, Moiseenko, A.V, Chen, T.H, Kulikov, E.E, Golomidova, A.K, Orekhov, P.S, Street, M.A, Sokolova, O.S, Letarov, A.V, Wolf, M. 登録日 2022-12-15 公開日 2023-12-13 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (5.5 Å) 主引用文献 Nearly complete structure of bacteriophage DT57C reveals architecture of head-to-tail interface and lateral tail fibers. Nat Commun, 14, 2023
8HRD	Crystal structure of the receptor binding domain of SARS-CoV-2 Delta variant in complex with IMCAS74 Fab and W14 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, IMCAS74 Fab heavy chain, IMCAS74 Fab light chain, ... 著者 Zhao, R.C, Wu, L.L, Han, P. 登録日 2022-12-15 公開日 2023-12-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 Defining a de novo non-RBM antibody as RBD-8 and its synergistic rescue of immune-evaded antibodies to neutralize Omicron SARS-CoV-2. Proc.Natl.Acad.Sci.USA, 120, 2023
8HR6	leucine DEHYDROGENASE STRUCTURE IN TERNARY COMPLEX WITH NAD+ from Bacillus thuringiensis 分子名称: Leucine dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION 著者 Li, X, Song, W. 登録日 2022-12-14 公開日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.52 Å) 主引用文献 A Tri-Enzyme Cascade for Efficient Production of L-2-Aminobutyrate from L-Threonine. Chembiochem, 24, 2023
8HR4	[D-Cys5,D-Lys16]-STp(5-17) 分子名称: DCY-CYS-GLU-LEU-CYS-CYS-ASN-PRO-ALA-CYS-ALA-DLY-CYS 著者 Shimamoto, S, Hidaka, Y, Yoshino, S, Goto, M. 登録日 2022-12-14 公開日 2023-12-20 実験手法 SOLUTION NMR 主引用文献 The molecular basis of heat-stable enterotoxin for vaccine development and cancer cell detection To Be Published
8HR3	[D-Cys5,Asp7,Val8,D-Lys16]-STp(5-17) 分子名称: DCY-CYS-ASP-VAL-CYS-CYS-ASN-PRO-ALA-CYS-ALA-DLY-CYS 著者 Shimamoto, S, Hidaka, Y, Yoshino, S, Goto, M. 登録日 2022-12-14 公開日 2023-09-20 実験手法 SOLUTION NMR 主引用文献 The Molecular Basis of Heat-Stable Enterotoxin for Vaccine Development and Cancer Cell Detection. Molecules, 28, 2023
8HR2	Ternary Crystal Complex Structure of RBD with NB1B5 and NB1C6 分子名称: NB1B5, NB1C6, Spike protein S1 著者 Sun, Z. 登録日 2022-12-14 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Structure basis of two nanobodies neutralizing SARS-CoV-2 Omicron variant by targeting ultra-conservative epitopes. J.Struct.Biol., 215, 2023
8HR1	Cryo-EM structure of SSX1 bound to the unmodified nucleosome at a resolution of 3.02 angstrom 分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... 著者 Zebin, T, Ai, H.S, Ziyu, X, Man, P, Liu, L. 登録日 2022-12-14 公開日 2023-09-13 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.02 Å) 主引用文献 Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes. Nat.Struct.Mol.Biol., 31, 2024
8HQZ	Baseplate of DT57C bacteriophage in the full state 分子名称: Baseplate hub protein, Distal tail protein, L-shaped tail fiber assembly, ... 著者 Ayala, R, Moiseenko, A.V, Chen, T.H, Kulikov, E.E, Golomidova, A.K, Orekhov, P.S, Street, M.A, Sokolova, O.S, Letarov, A.V, Wolf, M. 登録日 2022-12-14 公開日 2023-12-13 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Nearly complete structure of bacteriophage DT57C reveals architecture of head-to-tail interface and lateral tail fibers. Nat Commun, 14, 2023
8HQY	Cryo-EM structure of SSX1 bound to the H2AK119Ub nucleosome at a resolution of 3.05 angstrom 分子名称: DNA (136-MER), DNA (137-MER), Histone H2A type 1-B/E, ... 著者 Zebin, T, Ai, H.S, Ziyu, X, GuoChao, C, Man, P, Liu, L. 登録日 2022-12-14 公開日 2023-09-27 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.05 Å) 主引用文献 Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes. Nat.Struct.Mol.Biol., 31, 2024
8HQQ	Crystal structure of the glucose-binding protein SAR11_0769 from "Candidatus Pelagibacter ubique" HTCC1062 bound to glucose 分子名称: Probable binding protein component of ABC sugar transporter, beta-D-glucopyranose 著者 Clifton, B.E, Laurino, P. 登録日 2022-12-14 公開日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Crystal structure of the glucose-binding protein SAR11_0769 from "Candidatus Pelagibacter ubique" HTCC1062 bound to glucose To Be Published
8HQO	Neck of DT57C bacteriophage in the full state 分子名称: Head completion protein, Portal protein, Tail terminator protein, ... 著者 Ayala, R, Moiseenko, A.V, Chen, T.H, Kulikov, E.E, Golomidova, A.K, Orekhov, P.S, Street, M.A, Sokolova, O.S, Letarov, A.V, Wolf, M. 登録日 2022-12-13 公開日 2023-12-13 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Nearly complete structure of bacteriophage DT57C reveals architecture of head-to-tail interface and lateral tail fibers. Nat Commun, 14, 2023
8HQN	Activation mechanism of GPR132 by 9(S)-HODE 分子名称: (9S,10E,12Z)-9-hydroxyoctadeca-10,12-dienoic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Wang, J.L, Ding, J.H, Sun, J.P, Yu, X. 登録日 2022-12-13 公開日 2023-10-11 最終更新日 2023-11-01 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Functional screening and rational design of compounds targeting GPR132 to treat diabetes. Nat Metab, 5, 2023
8HQM	Activation mechanism of GPR132 by NPGLY 分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ... 著者 Wang, J.L, Ding, J.H, Sun, J.P, Yu, X. 登録日 2022-12-13 公開日 2023-10-11 最終更新日 2023-11-01 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 Functional screening and rational design of compounds targeting GPR132 to treat diabetes. Nat Metab, 5, 2023
8HQL	Crystal structure of mouse SNX25 PX domain 分子名称: ACETIC ACID, CHLORIDE ION, GLYCEROL, ... 著者 Yu, Z, Xu, J, Liu, J. 登録日 2022-12-13 公開日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of mouse SNX25 PX domain To Be Published
8HQK	Capsid of DT57C bacteriophage in the empty state 分子名称: Major head protein 著者 Ayala, R, Moiseenko, A.V, Kulikov, E.E, Golomidova, A.K, Orekhov, P.S, Street, M.A, Sokolova, O.S, Letarov, A.V, Wolf, M. 登録日 2022-12-13 公開日 2023-12-13 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Nearly complete structure of bacteriophage DT57C reveals architecture of head-to-tail interface and lateral tail fibers. Nat Commun, 14, 2023
8HQJ	Crystal structure of SARS-Cov-2 main protease Y54C mutant in complex with inhibitor YH-53 分子名称: 3C-like proteinase nsp5, N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide 著者 Zhou, X.L, Zhang, J, Li, J. 登録日 2022-12-13 公開日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Crystal structure of SARS-Cov-2 main protease Y54C mutant in complex with inhibitor YH-53 To Be Published

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