Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YHW
DownloadVisualize
BU of 5yhw by Molmil
Crystal structure of Pig SAMHD1
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, MAGNESIUM ION
著者Qin, X.H, Kong, J.
登録日2017-09-30
公開日2018-10-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural characterization and directed modification of Sus scrofa SAMHD1 reveal the mechanism underlying deoxynucleotide regulation.
Febs J., 286, 2019
4P5E
DownloadVisualize
BU of 4p5e by Molmil
CRYSTAL STRUCTURE OF HUMAN DNPH1 (RCL) WITH 6-NAPHTHYL-PURINE-RIBOSIDE-MONOPHOSPHATE
分子名称: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, 6-(naphthalen-2-yl)-9-(5-O-phosphono-beta-D-ribofuranosyl)-9H-purine, CALCIUM ION
著者Padilla, A, Labesse, G, Kaminski, P.A.
登録日2014-03-16
公開日2014-08-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献6-(Hetero)Arylpurine nucleotides as inhibitors of the oncogenic target DNPH1: Synthesis, structural studies and cytotoxic activities.
Eur.J.Med.Chem., 85C, 2014
3SLQ
DownloadVisualize
BU of 3slq by Molmil
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to guanosine-5'-monophosphate
分子名称: GUANOSINE-5'-MONOPHOSPHATE, RNA (68-MER), SUCCINIC ACID, ...
著者Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.
登録日2011-06-24
公開日2011-08-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SKR
DownloadVisualize
BU of 3skr by Molmil
Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cobalt Hexammine soak
分子名称: 2'-DEOXY-GUANOSINE, COBALT HEXAMMINE(III), MAGNESIUM ION, ...
著者Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.
登録日2011-06-23
公開日2011-08-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
3SKZ
DownloadVisualize
BU of 3skz by Molmil
Crystal structure of the 2'- deoxyguanosine riboswitch bound to guanosine
分子名称: GUANOSINE, MAGNESIUM ION, RNA (68-MER), ...
著者Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A.
登録日2011-06-23
公開日2011-08-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.605 Å)
主引用文献Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch.
Nat.Chem.Biol., 7, 2011
4R7A
DownloadVisualize
BU of 4r7a by Molmil
Crystal Structure of RBBP4 bound to PHF6 peptide
分子名称: GLYCEROL, Histone-binding protein RBBP4, PHD finger protein 6
著者Liu, Z, Li, F, Zhang, B, Li, S, Wu, J, Shi, Y.
登録日2014-08-27
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Basis of Plant Homeodomain Finger 6 (PHF6) Recognition by the Retinoblastoma Binding Protein 4 (RBBP4) Component of the Nucleosome Remodeling and Deacetylase (NuRD) Complex
J.Biol.Chem., 290, 2015
1D7Z
DownloadVisualize
BU of 1d7z by Molmil
CRYSTAL STRUCTURE OF A HEXITOL NUCLEIC ACID (HNA) DUPLEX AT 2.2 A RESOLUTION
分子名称: 5'-H(*(6HG)P*(6HT)P*(6HG)P*(6HT)P*(6HA)P*(6HC)P*(6HA)P*(6HC))-3'
著者Declercq, R, Van Meervelt, L.
登録日1999-10-21
公開日2002-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of double helical hexitol nucleic acids.
J.Am.Chem.Soc., 124, 2002
6AQ4
DownloadVisualize
BU of 6aq4 by Molmil
CRYSTAL STRUCTURE OF PROTEIN CiTE FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH MAGNESIUM, PYRUVATE AND CITRAMALYL-COA
分子名称: CHLORIDE ION, Citramalyl-CoA, Citrate lyase subunit beta-like protein, ...
著者Fedorov, A.A, Fedorov, E.V, Wang, H, Bonanno, J.B, Carvalho, L, Almo, S.C.
登録日2017-08-18
公開日2018-08-01
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.825 Å)
主引用文献An essential bifunctional enzyme inMycobacterium tuberculosisfor itaconate dissimilation and leucine catabolism.
Proc.Natl.Acad.Sci.USA, 116, 2019
2OP8
DownloadVisualize
BU of 2op8 by Molmil
Crystal Structure of YwhB- Homologue of 4-Oxalocrotonate Tautomerase
分子名称: Probable tautomerase ywhB
著者Hackert, M.L, Whitman, C.P, Almrud, J.J.
登録日2007-01-27
公開日2008-02-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Crystal Structure of YwhB, a 4-Oxalocrotonate Tautomerase Homologue from Bacillus subtilis: The Structural Basis for Catalysis, Inhibition, and Reaction Stereoselectivity
TO BE PUBLISHED
1AVT
DownloadVisualize
BU of 1avt by Molmil
SUBTILISIN CARLSBERG D-PARA-CHLOROPHENYL-1-ACETAMIDO BORONIC ACID INHIBITOR COMPLEX
分子名称: SODIUM ION, SUBTILISIN CARLSBERG, TYPE VIII
著者Stoll, V.S, Eger, B.T, Hynes, R.C, Martichonok, V, Jones, J.B, Pai, E.F.
登録日1997-09-19
公開日1998-03-25
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes.
Biochemistry, 37, 1998
2PB7
DownloadVisualize
BU of 2pb7 by Molmil
Crystal Structure of the SRA domain of the human UHRF1 protein
分子名称: E3 ubiquitin-protein ligase UHRF1
著者Delagoutte, B, Birck, C, Samama, J.P.
登録日2007-03-28
公開日2008-04-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The mammalian SRA domain is a new nucleosome binding motif
To be Published
6ARB
DownloadVisualize
BU of 6arb by Molmil
CRYSTAL STRUCTURE OF PROTEIN CitE FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH MAGNESIUM, PYRUVATE AND COENZYME A
分子名称: COENZYME A, Citrate lyase subunit beta-like protein, GLYCEROL, ...
著者Fedorov, A.A, Fedorov, E.V, Wang, H, Bonanno, J.B, Carvalho, L, Almo, S.C.
登録日2017-08-22
公開日2018-08-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.717 Å)
主引用文献An essential bifunctional enzyme inMycobacterium tuberculosisfor itaconate dissimilation and leucine catabolism.
Proc.Natl.Acad.Sci.USA, 116, 2019
1AV7
DownloadVisualize
BU of 1av7 by Molmil
SUBTILISIN CARLSBERG L-NAPHTHYL-1-ACETAMIDO BORONIC ACID INHIBITOR COMPLEX
分子名称: SODIUM ION, SUBTILISIN CARLSBERG, TYPE VIII
著者Stoll, V.S, Eger, B.T, Hynes, R.C, Martichonok, V, Jones, J.B, Pai, E.F.
登録日1997-09-29
公開日1998-04-01
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes.
Biochemistry, 37, 1998
3VPS
DownloadVisualize
BU of 3vps by Molmil
Structure of a novel NAD dependent-NDP-hexosamine 5,6-dehydratase, TunA, involved in tunicamycin biosynthesis
分子名称: NAD-dependent epimerase/dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Wyszynski, F.J, Lee, S.S, Yabe, T, Wang, H, Gomez-Escribano, J.P, Bibb, M.J, Lee, S.J, Davies, G.J, Davis, B.G.
登録日2012-03-12
公開日2012-04-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biosynthesis of nucleoside antibiotic tunicamycin proceeds via unique exo-glycal intermediates
To be published
1DK9
DownloadVisualize
BU of 1dk9 by Molmil
SOLUTION STRUCTURE ANALYSIS OF THE DNA DUPLEX D(CATGAGTAC)D(GTACTCATG)
分子名称: 5'-D(CP*AP*TP*GP*AP*GP*TP*AP*CP*)-3', 5'-D(GP*TP*AP*CP*TP*CP*AP*TP*GP*)-3'
著者Klewer, D.A, Hoskins, A, Davisson, V.J, Bergstrom, D.E, LiWang, A.C.
登録日1999-12-06
公開日1999-12-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of a DNA duplex containing nucleoside analog 1-(2'-deoxy-beta-D-ribofuranosyl)-3-nitropyrrole and the structure of the unmodified control.
Nucleic Acids Res., 28, 2000
6AS5
DownloadVisualize
BU of 6as5 by Molmil
CRYSTAL STRUCTURE OF PROTEIN CitE FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH MAGNESIUM, ACETOACETATE AND COENZYME A
分子名称: ACETOACETIC ACID, COENZYME A, Citrate lyase subunit beta-like protein, ...
著者Fedorov, A.A, Fedorov, E.V, Wang, H, Bonanno, J.B, Carvalho, L, Almo, S.C.
登録日2017-08-23
公開日2018-08-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.035 Å)
主引用文献An essential bifunctional enzyme inMycobacterium tuberculosisfor itaconate dissimilation and leucine catabolism.
Proc.Natl.Acad.Sci.USA, 116, 2019
4R6B
DownloadVisualize
BU of 4r6b by Molmil
Rational Design of Enhanced Photoresistance in a Photoswitchable Fluorescent Protein
分子名称: Green to red photoconvertible GFP-like protein EosFP, SULFATE ION, SULFITE ION
著者Duan, C, Adam, V, Byrdin, M, Bourgeois, D.
登録日2014-08-23
公開日2015-02-04
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Rational design of enhanced photoresistance in a photoswitchable fluorescent protein.
Methods Appl Fluoresc, 3, 2015
2VFT
DownloadVisualize
BU of 2vft by Molmil
Alditol Oxidase from Streptomyces coelicolor A3(2): Complex with Sorbitol
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, XYLITOL OXIDASE, ...
著者Forneris, F, Mattevi, A.
登録日2007-11-05
公開日2008-01-08
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Analysis of the Catalytic Mechanism and Stereoselectivity in Streptomyces Coelicolor Alditol Oxidase.
Biochemistry, 47, 2008
7CVM
DownloadVisualize
BU of 7cvm by Molmil
Crystal structure of glucose isomerase by fixed-target serial synchrotron crystallography (500 ms)
分子名称: MAGNESIUM ION, Xylose isomerase
著者Nam, K.H.
登録日2020-08-26
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
7CVK
DownloadVisualize
BU of 7cvk by Molmil
Crystal structure of glucose isomerase by fixed-target serial synchrotron crystallography (100 ms)
分子名称: MAGNESIUM ION, Xylose isomerase
著者Nam, K.H.
登録日2020-08-26
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
7CVJ
DownloadVisualize
BU of 7cvj by Molmil
Crystal structure of lysozyme by fixed-target serial synchrotron crystallography (100 ms)
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Nam, K.H.
登録日2020-08-26
公開日2020-09-09
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
7CVL
DownloadVisualize
BU of 7cvl by Molmil
Crystal structure of lysozyme by fixed-target serial synchrotron crystallography (500 ms)
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Nam, K.H.
登録日2020-08-26
公開日2020-09-09
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
3IM2
DownloadVisualize
BU of 3im2 by Molmil
Structure of the C-terminal Sec63 unit of yeast Brr2, P41212 Form
分子名称: Pre-mRNA-splicing helicase BRR2, TETRAETHYLENE GLYCOL
著者Pena, V, Hrmann, R.L, Wahl, M.C.
登録日2009-08-09
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Common Design Principles in the Spliceosomal RNA Helicase Brr2 and in the Hel308 DNA Helicase
To be Published
3MDA
DownloadVisualize
BU of 3mda by Molmil
DNA polymerase lambda in complex with araC
分子名称: DNA (5'-D(*CP*AP*GP*TP*AP*CP*(CAR))-3'), DNA (5'-D(*CP*GP*GP*CP*GP*GP*TP*AP*CP*TP*G)-3'), DNA (5'-D(P*GP*CP*CP*G)-3'), ...
著者Garcia-Diaz, M, Murray, M, Kunkel, T, Chou, K.M.
登録日2010-03-30
公開日2010-04-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.031 Å)
主引用文献Interaction between DNA Polymerase lambda and anticancer nucleoside analogs.
J.Biol.Chem., 285, 2010
8CU6
DownloadVisualize
BU of 8cu6 by Molmil
Crystal structure of A2AAR-StaR2-S277-bRIL in complex with a novel A2a antagonist, LJ-4517
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R,3R,4R)-2-[(8P)-6-amino-2-(hex-1-yn-1-yl)-8-(thiophen-2-yl)-9H-purin-9-yl]oxolane-3,4-diol, Adenosine receptor A2a,Soluble cytochrome b562, ...
著者Shiriaeva, A, Park, D.-J, Kim, G, Lee, Y, Hou, X, Jarhad, D.B, Kim, G, Yu, J, Hyun, Y.E, Kim, W, Gao, Z.-G, Jacobson, K.A, Han, G.W, Stevens, R.C, Jeong, L.S, Choi, S, Cherezov, V.
登録日2022-05-16
公開日2022-08-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献GPCR Agonist-to-Antagonist Conversion: Enabling the Design of Nucleoside Functional Switches for the A 2A Adenosine Receptor.
J.Med.Chem., 65, 2022

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon