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1F7G
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SOLUTION STRUCTURE OF THE RNASE P RNA (M1 RNA) P4 STEM C70U MUTANT OLIGORIBONUCLEOTIDE, ENSEMBLE OF 17 STRUCTURES
分子名称: RNASE P RNA RIBOZYME, P4 DOMAIN
著者Schmitz, M, Tinoco Jr, I.
登録日2000-06-27
公開日2000-10-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA.
RNA, 6, 2000
2HT1
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The closed ring structure of the Rho transcription termination factor in complex with nucleic acid in the motor domains
分子名称: 5'-R(*UP*C)-3', 5'-R(*UP*CP*UP*CP*U)-3', SULFATE ION, ...
著者Skordalakes, E, Berger, J.M.
登録日2006-07-24
公開日2006-11-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.51 Å)
主引用文献Structural Insights into RNA-Dependent Ring Closure and ATPase Activation by the Rho Termination Factor.
Cell(Cambridge,Mass.), 127, 2006
2HQT
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Crystal structures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA aminoacylation and nuclear export cofactor Arc1p reveal a novel function for an old fold
分子名称: GU4 nucleic-binding protein 1, SULFATE ION
著者Simader, H, Hothorn, M, Suck, D.
登録日2006-07-19
公開日2006-09-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA-aminoacylation and nuclear-export cofactor Arc1p reveal a novel function for an old fold.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
1EEG
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A(GGGG)A HEXAD PAIRING ALIGMENT FOR THE D(G-G-A-G-G-A-G) SEQUENCE
分子名称: DNA (5'-D(*GP*GP*AP*GP*GP*A)-3')
著者Kettani, A, Gorin, A, Majumdar, A, Hermann, T, Skripkin, E, Zhao, H, Jones, R, Patel, D.J.
登録日2000-01-31
公開日2000-04-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A dimeric DNA interface stabilized by stacked A.(G.G.G.G).A hexads and coordinated monovalent cations.
J.Mol.Biol., 297, 2000
2HX1
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Crystal structure of possible sugar phosphatase, HAD superfamily (ZP_00311070.1) from CYTOPHAGA HUTCHINSONII ATCC 33406 at 2.10 A resolution
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2006-08-02
公開日2006-09-05
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of possible sugar phosphatase, HAD superfamily (ZP_00311070.1) from CYTOPHAGA HUTCHINSONII ATCC 33406 at 2.10 A resolution
To be published
2J28
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MODEL OF E. COLI SRP BOUND TO 70S RNCS
分子名称: 23S RIBOSOMAL RNA, 4.5S SIGNAL RECOGNITION PARTICLE RNA, 50S ribosomal protein L11, ...
著者Halic, M, Blau, M, Becker, T, Mielke, T, Pool, M.R, Wild, K, Sinning, I, Beckmann, R.
登録日2006-08-16
公開日2006-11-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Following the Signal Sequence from Ribosomal Tunnel Exit to Signal Recognition Particle
Nature, 444, 2006
1FJ2
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Crystal structure of the human acyl protein thioesterase 1 at 1.5 A resolution
分子名称: BROMIDE ION, PROTEIN (ACYL PROTEIN THIOESTERASE 1)
著者Devedjiev, Y, Dauter, Z, Kuznetsov, S, Jones, T, Derewenda, Z.
登録日2000-08-07
公開日2000-11-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the human acyl protein thioesterase I from a single X-ray data set to 1.5 A.
Structure Fold.Des., 8, 2000
2I9I
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Crystal Structure of Helicobacter pylori protein HP0492
分子名称: Hypothetical protein
著者Bonanno, J.B, Dickey, M, Bain, K.T, Mckenzie, C, Ozyurt, S, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-09-05
公開日2006-09-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Helicobacter pylori hypothetical protein O25234
TO BE PUBLISHED
1CS0
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Crystal structure of carbamoyl phosphate synthetase complexed at CYS269 in the small subunit with the tetrahedral mimic l-glutamate gamma-semialdehyde
分子名称: ADENOSINE-5'-DIPHOSPHATE, CARBAMOYL PHOSPHATE SYNTHETASE: LARGE SUBUNIT, CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT, ...
著者Thoden, J.B, Huang, X, Raushel, F.M, Holden, H.M.
登録日1999-08-16
公開日1999-12-10
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The small subunit of carbamoyl phosphate synthetase: snapshots along the reaction pathway.
Biochemistry, 38, 1999
2J9F
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Human branched-chain alpha-ketoacid dehydrogenase-decarboxylase E1b
分子名称: 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT, 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT, C2-1-HYDROXY-3-METHYL-PROPYL-THIAMIN DIPHOSPHATE, ...
著者Jun, L, Machius, M, Chuang, J.L, Wynn, R.M, Chuang, D.T.
登録日2006-11-07
公開日2007-02-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The Two Active Sites in Human Branched-Chain Alpha- Keto Acid Dehydrogenase Operate Independently without an Obligatory Alternating-Site Mechanism.
J.Biol.Chem., 282, 2007
2ICZ
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NMR Structures of the Expanded DNA 10bp xTGxTAxCxGCxAxGT:xACTxGCGxTAxCA
分子名称: 5'-D(*(XAE)P*CP*TP*(XGA)P*CP*GP*(XTY)P*AP*(XCS)P*A)-3', 5'-D(*(XTY)P*GP*(XTY)P*AP*(XCS)P*(XGA)P*CP*(XAE)P*(XGA)P*T)-3'
著者Lynch, S.R.
登録日2006-09-13
公開日2006-11-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Toward a Designed, Functioning Genetic System with Expanded-Size Base Pairs: Solution Structure of the Eight-Base xDNA Double Helix.
J.Am.Chem.Soc., 128, 2006
2J58
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The structure of Wza
分子名称: HEXANE, N-OCTANE, OUTER MEMBRANE LIPOPROTEIN WZA, ...
著者Dong, C, Naismith, J.H.
登録日2006-09-12
公開日2006-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Wza the Translocon for E. Coli Capsular Polysaccharides Defines a New Class of Membrane Protein.
Nature, 444, 2006
2FHH
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Crystal Structure of Mycobacterium Tuberculosis Proteasome in complex with a peptidyl boronate inhibitor MLN-273
分子名称: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-YLCARBONYL)-3-(1-NAPHTHYL)-D-ALANYL]AMINO}BUTYLBORONIC ACID, 20S proteasome, alpha and beta subunits, ...
著者Li, H.
登録日2005-12-23
公開日2006-02-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structure of the Mycobacterium tuberculosis proteasome and mechanism of inhibition by a peptidyl boronate.
Mol.Microbiol., 59, 2006
2FF0
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Solution Structure of Steroidogenic Factor 1 DNA Binding Domain Bound to its Target Sequence in the Inhibin alpha-subunit Promoter
分子名称: CTGTGGCCCTGAGCC, GGCTCAGGGCCACAG, Steroidogenic factor 1, ...
著者Little, T.H, Zhang, Y, Matulis, C.K, Weck, J, Zhang, Z, Ramachandran, A, Mayo, K.E, Radhakrishnan, I.
登録日2005-12-17
公開日2006-04-11
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Sequence-specific deoxyribonucleic Acid (DNA) recognition by steroidogenic factor 1: a helix at the carboxy terminus of the DNA binding domain is necessary for complex stability.
Mol.Endocrinol., 20, 2006
2ESJ
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Complex between Lividomycin A and the 16S-Rrna A Site
分子名称: (2R,3S,4S,5S,6R)-2-((2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3S,4R,5S)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R ,5S,6R)-3-AMINO-5-HYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-4-HYDROXY-2-(HYDROXYMET HYL)-TETRAHYDROFURAN-3-YLOXY)-4-HYDROXY-TETRAHYDRO-2H-PYRAN-3-YLOXY)-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-3,4,5-TRIOL, 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'
著者Westhof, E.
登録日2005-10-26
公開日2005-12-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding
Nucleic Acids Res., 33, 2005
2ET4
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Complex Between Neomycin B and the 16S-RRNA A-Site
分子名称: 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3', NEOMYCIN
著者Westhof, E.
登録日2005-10-27
公開日2005-12-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding.
Nucleic Acids Res., 33, 2005
2FKW
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Structure of LH2 from Rps. acidophila crystallized in lipidic mesophases
分子名称: BACTERIOCHLOROPHYLL A, LAURYL DIMETHYLAMINE-N-OXIDE, Light-harvesting protein B-800/850, ...
著者Papiz, M.Z, Cherezov, V, Clogston, J, Caffrey, M.
登録日2006-01-05
公開日2006-03-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Room to Move: Crystallizing Membrane Proteins in Swollen Lipidic Mesophases
J.Mol.Biol., 357, 2006
2FEL
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3-carboxy-cis,cis-muconate lactonizing enzyme from Agrobacterium radiobacter S2
分子名称: 3-carboxy-cis,cis-muconate lactonizing enzyme, CHLORIDE ION, SULFATE ION
著者Lehtio, L, Goldman, A.
登録日2005-12-16
公開日2006-10-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and function of the 3-carboxy-cis,cis-muconate lactonizing enzyme from the protocatechuate degradative pathway of Agrobacterium radiobacter S2.
Febs J., 273, 2006
2FJF
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Structure of the G6 Fab, a phage derived VEGF binding Fab
分子名称: Heavy Chain of a VEGF binding Antibody, Light Chain of a VEGF binding Antibody
著者Wiesmann, C.
登録日2006-01-02
公開日2006-02-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure-function studies of two synthetic anti-vascular endothelial growth factor Fabs and comparison with the Avastin Fab.
J.Biol.Chem., 281, 2006
2F52
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Solution structure of cold shock protein CspB from Bacillus subtilis in complex with heptathymidine
分子名称: Cold shock protein cspB
著者Zeeb, M, Sticht, H, Balbach, J.
登録日2005-11-25
公開日2006-09-19
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Recognition of T-rich single-stranded DNA by the cold shock protein Bs-CspB in solution.
Nucleic Acids Res., 34, 2006
2J3U
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L-ficolin complexed to galactose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Garlatti, V, Gaboriaud, C.
登録日2006-08-23
公開日2007-01-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
1FNW
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CRYSTAL STRUCTURE OF STREPTOCOCCAL PYROGENIC EXOTOXIN A
分子名称: CADMIUM ION, EXOTOXIN TYPE A PRECURSOR (ALLELE 1)
著者Earhart, C.A, Vath, G.M, Roggiani, M, Schlivert, P.M, Ohlendorf, D.H.
登録日2000-08-23
公開日2000-11-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Structure of streptococcal pyrogenic exotoxin A reveals a novel metal cluster.
Protein Sci., 9, 2000
2J7P
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GMPPNP-stabilized NG domain complex of the SRP GTPases Ffh and FtsY
分子名称: 1,2-ETHANEDIOL, CELL DIVISION PROTEIN FTSY, IODIDE ION, ...
著者Freymann, D.M.
登録日2006-10-14
公開日2006-12-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structure of the Gmppnp-Stabilized Ng Domain Complex of the Srp Gtpases Ffh and Ftsy.
J.Struct.Biol., 158, 2007
2J1K
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CAV-2 fibre head in complex with CAR D1
分子名称: COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR, FIBER PROTEIN
著者Seiradake, E, Lortat-Jacob, H, Billet, O, Kremer, E.J, Cusack, S.
登録日2006-08-14
公開日2006-09-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Mutational Analysis of Human Ad37 and Canine Adenovirus 2 Fiber Heads in Complex with the D1 Domain of Coxsackie and Adenovirus Receptor.
J.Biol.Chem., 281, 2006
2IY4
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X-ray structure of Dps from Listeria monocytogenes
分子名称: FE (III) ION, NON-HEME IRON-CONTAINING FERRITIN
著者Ilari, A, Bellapadrona, G, Stefanini, S, Chiancone, E.
登録日2006-07-12
公開日2007-01-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献The Mutations Lys 114 --> Gln and Asp 126 --> Asn Disrupt an Intersubunit Salt Bridge and Convert Listeria Innocua Dps Into its Natural Mutant Listeria Monocytogenes Dps. Effects on Protein Stability at Low Ph.
Proteins, 66, 2007

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