PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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6FA9	CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 分子名称: Putative mRNA splicing factor, SULFATE ION 著者 Schmitt, A, Hamann, F, Neumann, P, Ficner, R. 登録日 2017-12-15 公開日 2018-07-11 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of the spliceosomal DEAH-box ATPase Prp2. Acta Crystallogr D Struct Biol, 74, 2018
7O0D	monomeric acetyl-CoA synthase in open conformation with methanethiol moiety of CoA bound to nickel proximal 分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CO-methylating acetyl-CoA synthase, ... 著者 Kreibich, J, Jeoung, J.H, Dobbek, H. 登録日 2021-03-26 公開日 2022-04-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Ligand binding at the Ni,Ni-[4Fe-4S] cluster of acetyl-CoA synthase To Be Published
8TLN	STRUCTURAL COMPARISON SUGGESTS THAT THERMOLYSIN AND RELATED NEUTRAL PROTEASES UNDERGO HINGE-BENDING MOTION DURING CATALYSIS 分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, LYSINE, ... 著者 Tronrud, D, Matthews, B.W. 登録日 1993-09-01 公開日 1994-04-30 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural comparison suggests that thermolysin and related neutral proteases undergo hinge-bending motion during catalysis. Biochemistry, 31, 1992
7O7P	(h-alpha2M)4 activated state 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-2-macroglobulin 著者 Luque, D, Goulas, T, Mata, C.P, Mendes, S.R, Gomis-Ruth, F.X, Caston, J.R. 登録日 2021-04-13 公開日 2022-04-13 最終更新日 2022-05-11 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Cryo-EM structures show the mechanistic basis of pan-peptidase inhibition by human alpha 2 -macroglobulin. Proc.Natl.Acad.Sci.USA, 119, 2022
4MNL	Crystal Structure of GH18 Chitinase (G77W/E119Q mutant) from Cycas revoluta in complex with (GlcNAc)4 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Chitinase A 著者 Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T. 登録日 2013-09-11 公開日 2014-10-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal Structure of GH18 Chitinase form Cycad, Cycas revoluta To be Published
7O11	ABC transporter NosDFY, nucleotide-free in GDN, R-domain 1 分子名称: MAGNESIUM ION, Probable ABC transporter ATP-binding protein NosF, Probable ABC transporter binding protein NosD, ... 著者 Mueller, C, Zhang, L, Lu, W, Einsle, O, Du, J. 登録日 2021-03-28 公開日 2022-04-13 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Molecular interplay of an assembly machinery for nitrous oxide reductase. Nature, 608, 2022
7O7S	(h-alpha2M)4 plasmin-activated II state 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-2-macroglobulin, ... 著者 Luque, D, Goulas, T, Mata, C.P, Mendes, S.R, Gomis-Ruth, F.X, Caston, J.R. 登録日 2021-04-13 公開日 2022-04-13 最終更新日 2022-05-11 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Cryo-EM structures show the mechanistic basis of pan-peptidase inhibition by human alpha 2 -macroglobulin. Proc.Natl.Acad.Sci.USA, 119, 2022
8FGX	Cryo-EM structure of the STAR-0215 Fab in complex with active human plasma kallikrein 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plasma kallikrein light chain, STAR-0215 Heavy chain, ... 著者 Fuller, J.R, Biris, N, Bista, P. 登録日 2022-12-13 公開日 2023-09-06 最終更新日 2023-10-25 実験手法 ELECTRON MICROSCOPY (2.62 Å) 主引用文献 STAR-0215 is a Novel, Long-Acting Monoclonal Antibody Inhibitor of Plasma Kallikrein for the Potential Treatment of Hereditary Angioedema. J.Pharmacol.Exp.Ther., 387, 2023
8T7Z	Crystal structure of alpha-glucosidase (yicI) from Klebsiella aerogenes 分子名称: Alpha-glucosidase yicI 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-06-21 公開日 2023-07-05 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of alpha-glucosidase (yicI) from Klebsiella aerogenes To be published
4MRE	Crystal structure of the murine CD44 hyaluronan binding domain complex with a small molecule 分子名称: 3-methylbenzene-1,2-diamine, CD44 antigen, DIMETHYL SULFOXIDE 著者 Liu, L.K, Finzel, B. 登録日 2013-09-17 公開日 2014-04-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Fragment-Based Identification of an Inducible Binding Site on Cell Surface Receptor CD44 for the Design of Protein-Carbohydrate Interaction Inhibitors. J.Med.Chem., 57, 2014
7O5L	Crystal structure of S-adenosyl-L-homocysteine hydrolase from Synechocystis sp. PCC 6803 cocrystallized with adenosine in the presence of Rb+ cations 分子名称: ADENOSINE, Adenosylhomocysteinase, CHLORIDE ION, ... 著者 Malecki, P.H, Imiolczyk, B, Barciszewski, J, Czyrko-Horczak, J, Brzezinski, K. 登録日 2021-04-08 公開日 2022-04-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Biochemical and structural insights into an unusual, alkali-metal-independent S-adenosyl-L-homocysteine hydrolase from Synechocystis sp. PCC 6803. Acta Crystallogr D Struct Biol, 78, 2022
4MMR	Crystal Structure of Prefusion-stabilized RSV F Variant Cav1 at pH 9.5 分子名称: Fusion glycoprotein F1 fused with Fibritin trimerization domain, Fusion glycoprotein F2 著者 Stewart-Jones, G.B.E, McLellan, J.S, Joyce, M.G, Sastry, M, Yang, Y, Graham, B.S, Kwong, P.D. 登録日 2013-09-09 公開日 2013-11-20 最終更新日 2021-06-02 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structure-based design of a fusion glycoprotein vaccine for respiratory syncytial virus. Science, 342, 2013
7O7Q	(h-alpha2M)4 trypsin-activated state 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-2-macroglobulin, ... 著者 Luque, D, Goulas, T, Mata, C.P, Mendes, S.R, Gomis-Ruth, F.X, Caston, J.R. 登録日 2021-04-13 公開日 2022-04-13 最終更新日 2022-05-11 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryo-EM structures show the mechanistic basis of pan-peptidase inhibition by human alpha 2 -macroglobulin. Proc.Natl.Acad.Sci.USA, 119, 2022
8TE6	Crystal structure of a multiple lysine-to-arginine substitution mutant of the human CRIg C3b-binding domain 分子名称: V-set and immunoglobulin domain-containing protein 4 著者 Abram, T.G, Geisbrecht, B.V. 登録日 2023-07-05 公開日 2023-07-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.251 Å) 主引用文献 New Insights into the Complement Receptor of the Ig Superfamily Obtained from Structural and Functional Studies on Two Mutants. Immunohorizons, 7, 2023
8FLJ	Cas1-Cas2/3 integrase and IHF bound to CRISPR leader, repeat and foreign DNA 分子名称: CRISPR leader and repeat, anti-sense strand of DNA, CRISPR leader, ... 著者 Santiago-Frangos, A, Henriques, W.S, Wiegand, T, Gauvin, C, Buyukyoruk, M, Neselu, K, Eng, E.T, Lander, G.C, Wiedenheft, B. 登録日 2022-12-21 公開日 2023-09-06 最終更新日 2023-11-22 実験手法 ELECTRON MICROSCOPY (3.48 Å) 主引用文献 Structure reveals why genome folding is necessary for site-specific integration of foreign DNA into CRISPR arrays. Nat.Struct.Mol.Biol., 30, 2023
8TE5	Crystal structure of a multiple lysine-to-arginine substitution mutant of the human CRIg C3b-binding domain 分子名称: V-set and immunoglobulin domain-containing protein 4 著者 Abram, T.G, Geisbrecht, B.V. 登録日 2023-07-05 公開日 2023-07-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.502 Å) 主引用文献 New Insights into the Complement Receptor of the Ig Superfamily Obtained from Structural and Functional Studies on Two Mutants. Immunohorizons, 7, 2023
6ET0	Crystal structure of PqsBC (C129A) mutant from Pseudomonas aeruginosa (crystal form 1) 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ... 著者 Witzgall, F, Blankenfeldt, W. 登録日 2017-10-25 公開日 2018-07-04 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 The Alkylquinolone Repertoire of Pseudomonas aeruginosa is Linked to Structural Flexibility of the FabH-like 2-Heptyl-3-hydroxy-4(1H)-quinolone (PQS) Biosynthesis Enzyme PqsBC. Chembiochem, 19, 2018
7O5M	Crystal structure of S-adenosyl-L-homocysteine hydrolase from Synechocystis sp. PCC 6803 cocrystallized with adenosine in the presence of Na+ cations 分子名称: ADENOSINE, Adenosylhomocysteinase, CHLORIDE ION, ... 著者 Malecki, P.H, Imiolczyk, B, Barciszewski, J, Czyrko-Horczak, J, Brzezinski, K. 登録日 2021-04-08 公開日 2022-04-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Biochemical and structural insights into an unusual, alkali-metal-independent S-adenosyl-L-homocysteine hydrolase from Synechocystis sp. PCC 6803. Acta Crystallogr D Struct Biol, 78, 2022
4MJS	crystal structure of a PB1 complex 分子名称: 1,2-ETHANEDIOL, Protein kinase C zeta type, Sequestosome-1 著者 Ren, J, Wang, Z.X, Wu, J.W. 登録日 2013-09-04 公開日 2014-08-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural and biochemical insights into the homotypic PB1-PB1 complex between PKC zeta and p62 Sci China Life Sci, 57, 2014
4MJJ	Crystal structure of the C2A domain of DOC2A 分子名称: Double C2-like domain-containing protein alpha 著者 Huang, Q.Q. 登録日 2013-09-03 公開日 2013-10-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of the C2A domain of DOC2A To be Published
7O6S	Crystal structure of a shortened IpgC variant in complex with N-(2H-1,3-benzodioxol-5-ylmethyl)cyclopentanamine 分子名称: CHLORIDE ION, Chaperone protein IpgC, DI(HYDROXYETHYL)ETHER, ... 著者 Gardonyi, M, Heine, A, Klebe, G. 登録日 2021-04-12 公開日 2022-04-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Crystal structure of a shortened IpgC variant in complex with N-(2H-1,3-benzodioxol-5-ylmethyl)cyclopentanamine To be published
8TIR	Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 1 sticky bases and 5' terminal phosphates. 分子名称: DNA (5'-D(A*CP*CP*CP*GP*GP*AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*AP*CP*GP*G)-3'), DNA (5'-D(A*GP*CP*CP*GP*TP*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*TP*CP*CP*GP*G)-3'), MAGNESIUM ION, ... 著者 Orun, A.R, Shields, E.T, Shrestha, R, Slaughter, C.K, Snow, C.D. 登録日 2023-07-20 公開日 2023-08-02 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Tuning chemical DNA ligation within DNA crystals and protein-DNA co-crystals Acs Nanosci Au, 2024
6EVM	Crystal structure of a Pro-9 complexed peptide-substrate-binding domain of human type II collagen prolyl 4-hydroxylase 分子名称: DIMETHYL SULFOXIDE, Pro-9, Prolyl 4-hydroxylase subunit alpha-2, ... 著者 Murthy, A.V, Sulu, R, Koski, M.K, Wierenga, R.K. 登録日 2017-11-02 公開日 2018-09-12 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural enzymology binding studies of the peptide-substrate-binding domain of human collagen prolyl 4-hydroxylase (type-II): High affinity peptides have a PxGP sequence motif. Protein Sci., 27, 2018
7OCP	NADPH bound to the dehydrogenase domain of the bifunctional mannitol-1-phosphate dehydrogenase/phosphatase MtlD from Acinetobacter baumannii 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Tam, H.K, Mueller, V, Pos, K.M. 登録日 2021-04-28 公開日 2022-04-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Unidirectional mannitol synthesis of Acinetobacter baumannii MtlD is facilitated by the helix-loop-helix-mediated dimer formation. Proc.Natl.Acad.Sci.USA, 119, 2022
7OAE	Cryo-EM structure of the plectasin fibril (double strands) 分子名称: Fungal defensin plectasin 著者 Effantin, G. 登録日 2021-04-19 公開日 2022-04-27 最終更新日 2022-11-16 実験手法 ELECTRON MICROSCOPY (2 Å) 主引用文献 pH- and concentration-dependent supramolecular assembly of a fungal defensin plectasin variant into helical non-amyloid fibrils. Nat Commun, 13, 2022

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