Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4L5C
DownloadVisualize
BU of 4l5c by Molmil
Methylthioadenosine phosphorylase from Schistosoma mansoni in complex with adenine in space group P212121
分子名称: ADENINE, GLYCEROL, S-methyl-5'-thioadenosine phosphorylase
著者Torini, J.R, DeMarco, R, Brandao-Neto, J, Pereira, H.M.
登録日2013-06-10
公開日2014-06-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.075 Å)
主引用文献Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway.
Plos Negl Trop Dis, 10, 2016
7OEE
DownloadVisualize
BU of 7oee by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ019b
分子名称: 4-[(4,4-dimethylpiperidin-1-yl)methyl]-~{N}-[[(3~{S})-1-[6-(methylamino)pyrimidin-4-yl]-3-oxidanyl-piperidin-3-yl]methyl]-2-oxidanyl-benzamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
4L6A
DownloadVisualize
BU of 4l6a by Molmil
Structure of human mitochondrial 5'(3')-deoxyribonucleotidase
分子名称: 5'(3')-deoxyribonucleotidase, mitochondrial, DI(HYDROXYETHYL)ETHER, ...
著者Pachl, P, Brynda, J, Rezacova, P.
登録日2013-06-12
公開日2014-02-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structures of human cytosolic and mitochondrial nucleotidases: implications for structure-based design of selective inhibitors.
Acta Crystallogr. D Biol. Crystallogr., 70, 2014
6F4N
DownloadVisualize
BU of 6f4n by Molmil
Human JMJD5 in complex with MN and 2OG.
分子名称: 2-OXOGLUTARIC ACID, JmjC domain-containing protein 5, MANGANESE (II) ION
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2017-11-29
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.541 Å)
主引用文献JMJD5 is a human arginyl C-3 hydroxylase.
Nat Commun, 9, 2018
7O67
DownloadVisualize
BU of 7o67 by Molmil
Crystal structure of human mitochondrial ferritin (hMTF) Fe(II)-loaded for 15 minutes showing either a dioxygen or a superoxide anion coordinated to iron ions in the ferroxidase site
分子名称: CHLORIDE ION, FE (II) ION, Ferritin, ...
著者Pozzi, C, Ciambellotti, S, Tassone, G, Turano, P, Mangani, S.
登録日2021-04-09
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Iron Binding in the Ferroxidase Site of Human Mitochondrial Ferritin.
Chemistry, 27, 2021
8RSC
DownloadVisualize
BU of 8rsc by Molmil
p97 (VCP) mutant - F539A
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Arie, M, Matzov, D, Karmona, R, Szenkier, N, Stanhill, A, Navon, A.
登録日2024-01-24
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献p97 (VCP) mutant - F539A
To Be Published
6EVJ
DownloadVisualize
BU of 6evj by Molmil
Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and capped RNA primer
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-D(*(GDM))-R(P*AP*AP*U)-3'), ...
著者Pflug, A, Cusack, S.
登録日2017-11-01
公開日2017-12-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Capped RNA primer binding to influenza polymerase and implications for the mechanism of cap-binding inhibitors.
Nucleic Acids Res., 46, 2018
8FWI
DownloadVisualize
BU of 8fwi by Molmil
Structure of dodecameric KaiC-RS-S413E/S414E solved by cryo-EM
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein KaiC, ...
著者Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D.
登録日2023-01-22
公開日2023-03-22
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献From primordial clocks to circadian oscillators.
Nature, 616, 2023
7O2V
DownloadVisualize
BU of 7o2v by Molmil
AURORA KINASE A IN COMPLEX WITH THE AUR-A/PDK1 INHIBITOR VI8
分子名称: 1-[[3,4-bis(fluoranyl)phenyl]methyl]-~{N}-[(1~{R})-2-[[(3~{E})-3-(1~{H}-imidazol-5-ylmethylidene)-2-oxidanylidene-1~{H}-indol-5-yl]amino]-2-oxidanylidene-1-phenyl-ethyl]-6-methyl-2-oxidanylidene-pyridine-3-carboxamide, Aurora kinase A
著者Garau, G.
登録日2021-03-31
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Development of potent dual PDK1/AurA kinase inhibitors for cancer therapy: Lead-optimization, structural insights, and ADME-Tox profile.
Eur.J.Med.Chem., 226, 2021
8SV2
DownloadVisualize
BU of 8sv2 by Molmil
Pasteurella multocida alpha2,3/2,6 sialyltransferase D141N bound to CMP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-2,3/2,6-sialyltransferase/sialidase, CYTIDINE-5'-MONOPHOSPHATE, ...
著者Stubbs, H.E, Iverson, T.M.
登録日2023-05-15
公開日2024-05-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Pasteurella multocida alpha2,3/2,6 sialyltransferase D141N bound to CMP
To Be Published
8FWJ
DownloadVisualize
BU of 8fwj by Molmil
Structure of dodecameric KaiC-RS-S413E/S414E complexed with KaiB-RS solved by cryo-EM
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein KaiB, ...
著者Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D.
登録日2023-01-22
公開日2023-03-22
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献From primordial clocks to circadian oscillators.
Nature, 616, 2023
8FM8
DownloadVisualize
BU of 8fm8 by Molmil
HIV-1 gp120 complex with CJF-IV-046
分子名称: (pentafluorophenyl)methyl (2R,3S)-2-(carbamimidamidomethyl)-3-[2-(4-chloro-3-fluoroanilino)(oxo)acetamido]-6-[(methylamino)methyl]-2,3-dihydro-1H-indole-1-carboxylate, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
著者Gong, Z, Hendrickson, W.A.
登録日2022-12-22
公開日2023-04-05
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity.
Proc.Natl.Acad.Sci.USA, 120, 2023
7OEI
DownloadVisualize
BU of 7oei by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ083
分子名称: (3~{R})-3-[[5-[(4,4-dimethylpiperidin-1-yl)methyl]-1~{H}-benzimidazol-2-yl]methyl]-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-ol, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
7OED
DownloadVisualize
BU of 7oed by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ019a
分子名称: 4-[(4,4-dimethylpiperidin-1-yl)methyl]-~{N}-[[(3~{R})-1-[6-(methylamino)pyrimidin-4-yl]-3-oxidanyl-piperidin-3-yl]methyl]-2-oxidanyl-benzamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
7OEJ
DownloadVisualize
BU of 7oej by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ090
分子名称: 4-[[(3S)-3-cyclopropyl-2-azaspiro[3.3]heptan-2-yl]methyl]-N-[[(3R)-1-[6-(methylamino)pyrimidin-4-yl]-3-oxidanyl-piperidin-3-yl]methyl]-2-oxidanyl-benzamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
4L7C
DownloadVisualize
BU of 4l7c by Molmil
Structure of keap1 kelch domain with 2-{[(1S)-2-{[(1R,2S)-2-(1H-tetrazol-5-yl)cyclohexyl]carbonyl}-1,2,3,4-tetrahydroisoquinolin-1-yl]methyl}-1H-isoindole-1,3(2H)-dione
分子名称: 2-{[(1S)-2-{[(1R,2S)-2-(1H-tetrazol-5-yl)cyclohexyl]carbonyl}-1,2,3,4-tetrahydroisoquinolin-1-yl]methyl}-1H-isoindole-1,3(2H)-dione, ACETATE ION, Kelch-like ECH-associated protein 1
著者Jnoff, E, Brookfield, F, Albrecht, C, Barker, J.J, Barker, O, Beaumont, E, Bromidge, S, Brooks, M, Ceska, T, Courade, J.P, Crabbe, T, Duclos, S, Fryatt, T, Jigorel, E, Kwong, J, Sands, Z, Smith, M.A.
登録日2013-06-13
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Binding Mode and Structure-Activity Relationships around Direct Inhibitors of the Nrf2-Keap1 Complex.
Chemmedchem, 9, 2014
7OEH
DownloadVisualize
BU of 7oeh by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ059b
分子名称: 4-[[(3S)-3-cyclopropyl-2-azaspiro[3.3]heptan-2-yl]methyl]-N-[[(3S)-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
7OEG
DownloadVisualize
BU of 7oeg by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ040b
分子名称: (R)-4-((2-azaspiro[3.3]heptan-2-yl)methyl)-N-((1-(6-(benzylamino)pyrimidin-4-yl)-3-hydroxypiperidin-3-yl)methyl)benzamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
7OEM
DownloadVisualize
BU of 7oem by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ120
分子名称: 4-[(4,4-dimethylpiperidin-1-yl)methyl]-2-methylsulfanyl-~{N}-[[(3~{R})-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide, ACETATE ION, MAGNESIUM ION, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
7NWK
DownloadVisualize
BU of 7nwk by Molmil
Crystal structure of CDK9-Cyclin T1 bound by compound 6
分子名称: Cyclin-T1, Cyclin-dependent kinase 9, N-((1R,3R)-3-(7-(4-fluoro-2-methoxyphenyl)-3H-imidazo[4,5-b]pyridin-2-yl)cyclopentyl)acetamide
著者Collie, G.W, Ferguson, A.D.
登録日2021-03-16
公開日2021-10-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Discovery of a Series of 7-Azaindoles as Potent and Highly Selective CDK9 Inhibitors for Transient Target Engagement.
J.Med.Chem., 64, 2021
8RZ6
DownloadVisualize
BU of 8rz6 by Molmil
SeMet derivative structure of the condensation domain TomBC from the Tomaymycin non-ribosomal peptide synthetase
分子名称: FORMIC ACID, GLYCEROL, POTASSIUM ION, ...
著者Karanth, M, Schmelz, S, Kirkpatrick, J, Krausze, J, Scrima, A, Carlomagno, T.
登録日2024-02-12
公開日2024-06-26
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The specificity of intermodular recognition in a prototypical nonribosomal peptide synthetase depends on an adaptor domain.
Sci Adv, 10, 2024
7OBN
DownloadVisualize
BU of 7obn by Molmil
Structural investigations of a new L3 DNA ligase: structure-function analysis
分子名称: ADENOSINE MONOPHOSPHATE, DNA (5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'), DNA ligase, ...
著者Leiros, H.-K.S, Williamson, A.
登録日2021-04-23
公開日2022-02-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Bacteriophage origin of some minimal ATP-dependent DNA ligases: a new structure from Burkholderia pseudomallei with striking similarity to Chlorella virus ligase.
Sci Rep, 11, 2021
8RT5
DownloadVisualize
BU of 8rt5 by Molmil
I-layer structure (TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.
分子名称: TrwE protein, TrwF protein
著者Mace, K, Waksman, G.
登録日2024-01-25
公開日2024-06-19
最終更新日2024-08-14
実験手法ELECTRON MICROSCOPY (2.69 Å)
主引用文献Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
8FOZ
DownloadVisualize
BU of 8foz by Molmil
Human IMPDH2 mutant - L245P, treated with ATP, IMP, and NAD+; filament assembly interface reconstruction
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者O'Neill, A.G, Kollman, J.M.
登録日2023-01-03
公開日2023-04-19
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Neurodevelopmental disorder mutations in the purine biosynthetic enzyme IMPDH2 disrupt its allosteric regulation.
J.Biol.Chem., 299, 2023
4LDZ
DownloadVisualize
BU of 4ldz by Molmil
Crystal structure of the full-length response regulator DesR in the active state
分子名称: BERYLLIUM TRIFLUORIDE ION, GLYCEROL, MAGNESIUM ION, ...
著者Trajtenberg, F, Larrieux, N, Buschiazzo, A.
登録日2013-06-25
公開日2014-07-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Allosteric activation of bacterial response regulators: the role of the cognate histidine kinase beyond phosphorylation.
MBio, 5, 2014

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon