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4LWY
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BU of 4lwy by Molmil
L(M196)H,H(M202)L Double Mutant Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV
分子名称: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Gabdulkhakov, A.G.
登録日2013-07-29
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献Molecular Dynamic Studies of Reaction Centers Mutants from Rhodobacter sphaeroides and his mutant form L(M196)H+H(M202)L
CRYSTALLOGR REP., 59, 2014
8SPV
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BU of 8spv by Molmil
PS3 F1 Rotorless, no ATP
分子名称: ATP synthase subunit alpha, ATP synthase subunit beta
著者Sobti, M, Stewart, A.G.
登録日2023-05-03
公開日2024-01-24
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献The series of conformational states adopted by rotorless F 1 -ATPase during its hydrolysis cycle.
Structure, 32, 2024
6E34
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BU of 6e34 by Molmil
Capsid protein of PCV2 with N,O6-DISULFO-GLUCOSAMINE and 2-O-sulfo-alpha-L-idopyranuronic acid
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Capsid protein of PCV2
著者Khayat, R, Dhindwal, S.
登録日2018-07-13
公開日2018-12-26
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.
J.Virol., 93, 2019
7NPA
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BU of 7npa by Molmil
Crystal structure of the Coenzyme F420-dependent sulfite reductase from Methanothermococcus thermolithotrophicus at 1.55-A resolution
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Jespersen, M, Wagner, T.
登録日2021-02-26
公開日2022-03-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structures of the sulfite detoxifying F 420 -dependent enzyme from Methanococcales.
Nat.Chem.Biol., 2023
8EKK
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BU of 8ekk by Molmil
Clostridioides difficile binary toxin translocase CDTb wild-type after calcium depletion from receptor binding domain 1 (RBD1) - Class 2
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Abeyawardhane, D.L, Pozharski, E.
登録日2022-09-21
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
6E7B
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BU of 6e7b by Molmil
13-pf 3-start GMPCPP-human alpha1B/beta3 microtubules
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Ti, S.C, Alushin, G.M, Kapoor, T.M.
登録日2018-07-25
公開日2018-10-10
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Human beta-Tubulin Isotypes Can Regulate Microtubule Protofilament Number and Stability.
Dev. Cell, 47, 2018
7NAK
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BU of 7nak by Molmil
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (TIR:1AD)
分子名称: NAD(+) hydrolase SARM1, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(5-iodanylisoquinolin-2-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Kerry, P.S, Nanson, J.D, Adams, S, Cunnea, K, Bosanac, T, Kobe, B, Hughes, R.O, Ve, T.
登録日2021-06-21
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of SARM1 activation, substrate recognition, and inhibition by small molecules.
Mol.Cell, 82, 2022
6EJU
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BU of 6eju by Molmil
Nuclease NucB from Bacillus licheniformis in P1 space group
分子名称: Nuclease, SULFATE ION
著者Stransky, J, Dohnalek, J, Oestergaard, L.A.
登録日2017-09-23
公開日2019-04-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of novel nuclease NucB from Bacillus licheniformis
To Be Published
8EKL
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BU of 8ekl by Molmil
Clostridioides difficile binary toxin translocase CDTb wild-type after calcium depletion from receptor binding domain 1 (RBD1) - Class 1
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Abeyawardhane, D.L, Pozharski, E.
登録日2022-09-21
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
4M5A
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BU of 4m5a by Molmil
Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina inhibited by asymmetric dimethyl arginine at 1.70 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, NG,NG-DIMETHYL-L-ARGININE, rRNA N-glycosidase
著者Yamini, S, Pandey, S, Kushwaha, G.S, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
登録日2013-08-08
公開日2013-08-28
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina inhibited by asymmetric dimethyl arginine at 1.70 A resolution
To be Published
8F0I
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BU of 8f0i by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with human antibody COVA309-22
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COVA309-22 heavy chain, COVA309-22 light chain, ...
著者Yuan, M, Wilson, I.A.
登録日2022-11-03
公開日2023-09-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Broad SARS-CoV-2 neutralization by monoclonal and bispecific antibodies derived from a Gamma-infected individual.
Iscience, 26, 2023
8SPX
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BU of 8spx by Molmil
PS3 F1 Rotorless, high ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
著者Sobti, M, Stewart, A.G.
登録日2023-05-03
公開日2024-01-24
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献The series of conformational states adopted by rotorless F 1 -ATPase during its hydrolysis cycle.
Structure, 32, 2024
7NP8
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BU of 7np8 by Molmil
Crystal structure of the Coenzyme F420-dependent sulfite reductase from Methanocaldococcus jannaschii at 2.3-A resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Jespersen, M, Wagner, T.
登録日2021-02-26
公開日2022-03-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of the sulfite detoxifying F 420 -dependent enzyme from Methanococcales.
Nat.Chem.Biol., 2023
8RQU
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BU of 8rqu by Molmil
Structure of TEM1 beta-lactamase variant 70.a
分子名称: Beta-lactamase TEM-1, MAGNESIUM ION
著者Napier, E, Fram, B.F, Gauthier, N.P, Sander, C, Khan, A.R.
登録日2024-01-19
公開日2024-02-14
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Simultaneous enhancement of multiple functional properties using evolution-informed protein design.
Nat Commun, 15, 2024
7NAL
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BU of 7nal by Molmil
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (ARM and SAM domains)
分子名称: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NAD(+) hydrolase SARM1
著者Kerry, P.S, Nanson, J.D, Adams, S, Cunnea, K, Bosanac, T, Kobe, B, Hughes, R.O, Ve, T.
登録日2021-06-21
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of SARM1 activation, substrate recognition, and inhibition by small molecules.
Mol.Cell, 82, 2022
6EBK
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BU of 6ebk by Molmil
The voltage-activated Kv1.2-2.1 paddle chimera channel in lipid nanodiscs
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Potassium voltage-gated channel subfamily A member 2,Potassium voltage-gated channel subfamily B member 2 chimera, Voltage-gated potassium channel subunit beta-2
著者Matthies, D, Bae, C, Fox, T, Bartesaghi, A, Subramaniam, S, Swartz, K.J.
登録日2018-08-06
公開日2018-08-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs.
Elife, 7, 2018
8RV9
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BU of 8rv9 by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 6
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-2-chloranyl-benzoic acid, ...
著者Kalnins, G.
登録日2024-01-31
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 6
To Be Published
6ECI
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BU of 6eci by Molmil
Structure of the FAD binding protein MSMEG_5243 from Mycobacterium smegmatis
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Pyridoxamine 5'-phosphate oxidase-related, ...
著者Ahmed, F.H, Antoney, J, Carr, P.D, Jackson, C.J.
登録日2018-08-07
公開日2018-12-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献FAD-sequestering proteins protect mycobacteria against hypoxic and oxidative stress.
J. Biol. Chem., 294, 2019
8SWK
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BU of 8swk by Molmil
Cryo-EM structure of NLRP3 closed hexamer
分子名称: 1-[4-(2-oxidanylpropan-2-yl)furan-2-yl]sulfonyl-3-(1,2,3,5-tetrahydro-s-indacen-4-yl)urea, ADENOSINE-5'-TRIPHOSPHATE, NACHT, ...
著者Yu, X, Matico, R.E, Miller, R, Schoubroeck, B.V, Grauwen, K, Suarez, J, Pietrak, B, Haloi, N, Yin, Y, Tresadern, G.J, Perez-Benito, L, Lindahl, E, Bottelbergs, A, Oehlrich, D, Opdenbosch, N.V, Sharma, S.
登録日2023-05-18
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (4.32 Å)
主引用文献Cryo-EM structures of NLRP3 reveal its self-activation mechanism
Nat Commun, 2024
4M95
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BU of 4m95 by Molmil
d(ATCCGTTATAACGGAT)complexed with Moloney Murine Leukemia virus reverse transcriptase catalytic fragment
分子名称: 1,2-ETHANEDIOL, 5' d(ATCCGTTA) 3', 5' d(TAACGGAT) 3', ...
著者Singh, I.
登録日2013-08-14
公開日2014-03-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献The structure of an authentic spore photoproduct lesion in DNA suggests a basis for recognition.
Acta Crystallogr.,Sect.D, 70, 2014
8RZC
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BU of 8rzc by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 11
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-imidazol-1-yl-benzoic acid, ...
著者Kalnins, G.
登録日2024-02-12
公開日2024-02-21
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 11
To Be Published
7N5B
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BU of 7n5b by Molmil
Structure of AtAtm3 in the outward-facing conformation
分子名称: ABC transporter B family member 25, mitochondrial, ADENOSINE-5'-DIPHOSPHATE, ...
著者Fan, C, Rees, D.C.
登録日2021-06-05
公開日2022-04-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Glutathione binding to the plant At Atm3 transporter and implications for the conformational coupling of ABC transporters.
Elife, 11, 2022
8RZD
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BU of 8rzd by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 9
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-(3-hydroxyphenyl)benzoic acid, ...
著者Kalnins, G.
登録日2024-02-12
公開日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 9
To Be Published
6EFN
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BU of 6efn by Molmil
Structure of a RiPP maturase, SkfB
分子名称: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Grell, T.A.J, Drennan, C.L.
登録日2018-08-16
公開日2018-10-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.291 Å)
主引用文献Structure of a RiPP maturase, SkfB
J.Biol.Chem., 2018
7N58
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BU of 7n58 by Molmil
Structure of AtAtm3 in the inward-facing conformation
分子名称: ABC transporter B family member 25, mitochondrial
著者Fan, C, Rees, D.C.
登録日2021-06-05
公開日2022-04-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Glutathione binding to the plant At Atm3 transporter and implications for the conformational coupling of ABC transporters.
Elife, 11, 2022

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件を2024-08-21に公開中

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