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8CHI
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Human FKBP12 in complex with (1S,5S,6R)-10-((S)-3,5-dichloro-N-methylphenylsulfonimidoyl)-3-(pyridin-2-ylmethyl)-5-vinyl-3,10-diazabicyclo[4.3.1]decan-2-one
分子名称: (1S,5S,6R)-10-[S-[3,5-bis(chloranyl)phenyl]-N-methyl-sulfonimidoyl]-5-ethenyl-3-(pyridin-2-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-2-one, DIMETHYL SULFOXIDE, Peptidyl-prolyl cis-trans isomerase FKBP1A
著者Meyners, C, Purder, P.L, Hausch, F.
登録日2023-02-08
公開日2023-09-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Deconstructing Protein Binding of Sulfonamides and Sulfonamide Analogues.
Jacs Au, 3, 2023
8CHK
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Human FKBP12 in complex with (1S,5S,6R)-10-((S)-(3,5-dichlorophenyl)sulfonimidoyl)-3-(pyridin-2-ylmethyl)-5-vinyl-3,10-diazabicyclo[4.3.1]decan-2-one
分子名称: (1S,5S,6R)-10-[[3,5-bis(chloranyl)phenyl]sulfonimidoyl]-5-ethenyl-3-(pyridin-2-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-2-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Peptidyl-prolyl cis-trans isomerase FKBP1A
著者Meyners, C, Purder, P.L, Hausch, F.
登録日2023-02-08
公開日2023-09-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Deconstructing Protein Binding of Sulfonamides and Sulfonamide Analogues.
Jacs Au, 3, 2023
8CQ1
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Stem-Loop 4 of the 5'-UTR of the SARS-CoV2 genomic RNA
分子名称: 5_SL4
著者Duchardt-Ferner, E, Voegele, J.
登録日2023-03-03
公開日2023-09-20
最終更新日2023-11-22
実験手法SOLUTION NMR
主引用文献High-resolution structure of stem-loop 4 from the 5'-UTR of SARS-CoV-2 solved by solution state NMR.
Nucleic Acids Res., 51, 2023
8CPB
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1,6-anhydro-n-actetylmuramic acid kinase (AnmK) in complex with AMPPNP, and AnhMurNAc at 1.7 Angstroms resolution.
分子名称: 2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID, Anhydro-N-acetylmuramic acid kinase, GLYCEROL, ...
著者Jimenez-Faraco, E, Hermoso, J.A.
登録日2023-03-02
公開日2023-09-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Catalytic process of anhydro-N-acetylmuramic acid kinase from Pseudomonas aeruginosa.
J.Biol.Chem., 299, 2023
8CHJ
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Human FKBP12 in complex with (1S,5S,6R)-10-((R)-(3,5-dichlorophenyl)sulfonimidoyl)-3-(pyridin-2-ylmethyl)-5-vinyl-3,10-diazabicyclo[4.3.1]decan-2-one
分子名称: (1S,5S,6R)-10-[[3,5-bis(chloranyl)phenyl]sulfonimidoyl]-5-ethenyl-3-(pyridin-2-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-2-one, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Meyners, C, Purder, P.L, Hausch, F.
登録日2023-02-08
公開日2023-09-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献Deconstructing Protein Binding of Sulfonamides and Sulfonamide Analogues.
Jacs Au, 3, 2023
8CP9
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1,6-anhydro-n-actetylmuramic acid kinase (AnmK)in complex with non-hydrolyzable AMPPNP.
分子名称: Anhydro-N-acetylmuramic acid kinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Jimenez-Faraco, E, Hermoso, J.A.
登録日2023-03-02
公開日2023-09-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Catalytic process of anhydro-N-acetylmuramic acid kinase from Pseudomonas aeruginosa.
J.Biol.Chem., 299, 2023
8CPC
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3D electron diffraction structure of Hen Egg-White Lysozyme from nano-crystals obtained by high pressure freezing and cryo-sectioning
分子名称: Lysozyme C
著者Moriscot, C, Schoehn, G, Housset, D.
登録日2023-03-02
公開日2023-09-20
実験手法ELECTRON CRYSTALLOGRAPHY (2.91 Å)
主引用文献High pressure freezing and cryo-sectioning can be used for protein structure determination by electron diffraction.
Ultramicroscopy, 254, 2023
7SHG
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Polysaccharide ribofuranosyl transferase from Thermobacillus composti
分子名称: CHLORIDE ION, MAGNESIUM ION, Ribofuranosyl transferase
著者Kimber, M.S, Kelly, S.D.
登録日2021-10-08
公開日2022-03-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The biosynthetic origin of ribofuranose in bacterial polysaccharides.
Nat.Chem.Biol., 18, 2022
7SKA
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BU of 7ska by Molmil
Sub-tomogram averaged structure of HIV-1 Envelope protein in native membrane
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(2-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mangala Prasad, V, Lee, K.K.
登録日2021-10-20
公開日2022-03-09
実験手法ELECTRON MICROSCOPY (9.1 Å)
主引用文献Cryo-ET of Env on intact HIV virions reveals structural variation and positioning on the Gag lattice.
Cell, 185, 2022
8CNN
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BU of 8cnn by Molmil
BeF3 Phospho-HRas GSA complex
分子名称: ACETATE ION, BERYLLIUM TRIFLUORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Baumann, P, Jin, Y.
登録日2023-02-23
公開日2023-09-27
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Far-reaching effects of tyrosine64 phosphorylation on Ras revealed with BeF 3 - complexes.
Commun Chem, 7, 2024
8CNJ
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HRas(1-166) in complex with GDP and BeF3-
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, BERYLLIUM TRIFLUORIDE ION, GTPase HRas, ...
著者Baumann, P, Jin, Y.
登録日2023-02-23
公開日2023-09-27
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Far-reaching effects of tyrosine64 phosphorylation on Ras revealed with BeF 3 - complexes.
Commun Chem, 7, 2024
8CQM
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Broad-range phospholipase C from Listeria monocytogenes
分子名称: FE (III) ION, GLYCEROL, Phospholipase C, ...
著者Petrisic, N, Podobnik, M.
登録日2023-03-06
公開日2023-10-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the unique molecular properties of broad-range phospholipase C from Listeria monocytogenes.
Nat Commun, 14, 2023
7SCP
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The crystal structure of ScoE in complex with intermediate
分子名称: (3R)-3-(oxaloamino)butanoic acid, 1,2-ETHANEDIOL, FE (II) ION, ...
著者Cha, L, Chen, J, Zhou, J, Chang, W.
登録日2021-09-28
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Deciphering the Reaction Pathway of Mononuclear Iron Enzyme-Catalyzed N-C Triple Bond Formation in Isocyanide Lipopeptide and Polyketide Biosynthesis
Acs Catalysis, 12, 2022
1PZR
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BU of 1pzr by Molmil
Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS2 and DEBS3: the B domain
分子名称: Erythronolide synthase
著者Broadhurst, R.W, Nietlispach, D, Wheatcroft, M.P, Leadlay, P.F, Weissman, K.J.
登録日2003-07-14
公開日2004-02-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The structure of docking domains in modular polyketide synthases.
Chem.Biol., 10, 2003
1PZQ
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Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS 2 and DEBS 3: The A domain
分子名称: Erythronolide synthase
著者Broadhurst, R.W, Nietlispach, D, Wheatcroft, M.P, Leadlay, P.F, Weissman, K.J.
登録日2003-07-14
公開日2004-02-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The structure of docking domains in modular polyketide synthases.
Chem.Biol., 10, 2003
1SO9
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Solution Structure of apoCox11, 30 structures
分子名称: Cytochrome C oxidase assembly protein ctaG
著者Banci, L, Bertini, I, Cantini, F, Ciofi-Baffoni, S, Gonnelli, L, Mangani, S, Structural Proteomics in Europe (SPINE)
登録日2004-03-13
公開日2004-08-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of Cox11, a Novel Type of {beta}-Immunoglobulin-like Fold Involved in CuB Site Formation of Cytochrome c Oxidase.
J.Biol.Chem., 279, 2004
1PQT
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REFINEMENT OF d(GCGAAGC) HAIRPIN STRUCTURE USING ONE- AND TWO-BOND RESIDUAL DIPOLAR COUPLINGS
分子名称: 5'-D(*GP*CP*GP*AP*AP*GP*C)-3'
著者Padrta, P, Stefl, R, Zidek, L, Sklenar, V.
登録日2003-06-19
公開日2003-07-01
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Refinement of d(GCGAAGC) Hairpin Structure Using One- and Two-Bond Residual Dipolar Couplings
J.Biomol.NMR, 24, 2002
1SZO
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Crystal Structure Analysis of the 6-Oxo Camphor Hydrolase His122Ala Mutant Bound to Its Natural Product (2S,4S)-alpha-Campholinic Acid
分子名称: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3,3-TRIMETHYLCYCLOPENTANONE, 6-oxocamphor hydrolase, CALCIUM ION
著者Leonard, P.M, Grogan, G.
登録日2004-04-06
公開日2004-06-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of 6-oxo camphor hydrolase H122A mutant bound to its natural product, (2S,4S)-alpha-campholinic acid: mutant structure suggests an atypical mode of transition state binding for a crotonase homolog.
J.Biol.Chem., 279, 2004
1RWD
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Backbone NMR Structure of a Mutant P. Furiosus Rubredoxin Using Residual Dipolar Couplings
分子名称: Rubredoxin
著者Tian, F, Valafar, H, Prestegard, J.H, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2003-12-16
公開日2003-12-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A Dipolar Coupling Based Strategy for Simultaneous Resonance Assignment and Structure Determination of Protein Backbones
J.Am.Chem.Soc., 123, 2001
1P3H
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Crystal Structure of the Mycobacterium tuberculosis chaperonin 10 tetradecamer
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 10 kDa chaperonin, CALCIUM ION
著者Roberts, M.M, Coker, A.R, Fossati, G, Mascagni, P, Coates, A.R.M, Wood, S.P, TB Structural Genomics Consortium (TBSGC)
登録日2003-04-17
公開日2003-07-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mycobacterium tuberculosis chaperonin 10 heptamers self-associate through their biologically active loops
J.BACTERIOL., 185, 2003
1T5A
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Human Pyruvate Kinase M2
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, MAGNESIUM ION, ...
著者Dombrauckas, J.D, Santarsiero, B.D, Mesecar, A.D.
登録日2004-05-03
公開日2005-07-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for tumor pyruvate kinase M2 allosteric regulation and catalysis.
Biochemistry, 44, 2005
1SP0
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BU of 1sp0 by Molmil
Solution Structure of apoCox11
分子名称: Cytochrome C oxidase assembly protein ctaG
著者Banci, L, Bertini, I, Cantini, F, Ciofi-Baffoni, S, Gonnelli, L, Mangani, S.
登録日2004-03-16
公開日2004-08-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of Cox11, a Novel Type of {beta}-Immunoglobulin-like Fold Involved in CuB Site Formation of Cytochrome c Oxidase.
J.Biol.Chem., 279, 2004
5AZ2
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Crystal structure of the Fab fragment of 9E5, a murine monoclonal antibody specific for human epiregulin
分子名称: anti-human epiregulin antibody 9E5 Fab heavy chain, anti-human epiregulin antibody 9E5 Fab light chain
著者Kado, Y, Mizohata, E, Nagatoishi, S, Iijima, M, Shinoda, K, Miyafusa, T, Nakayama, T, Yoshizumi, T, Sugiyama, A, Kawamura, T, Lee, Y.H, Matsumura, H, Doi, H, Fujitani, H, Kodama, T, Shibasaki, Y, Tsumoto, K, Inoue, T.
登録日2015-09-16
公開日2015-12-09
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES
J.Biol.Chem., 291, 2016
5B4N
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Structure analysis of function associated loop mutant of substrate recognition domain of Fbs1 ubiquitin ligase
分子名称: F-box only protein 2
著者Nishio, K, Yoshida, Y, Tanaka, K, Mizushima, T.
登録日2016-04-06
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural analysis of a function-associated loop mutant of the substrate-recognition domain of Fbs1 ubiquitin ligase
Acta Crystallogr.,Sect.F, 72, 2016
5B62
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Crystal structure of N-terminal amidase with Asn-Glu-Ala peptide
分子名称: ASN-GLU-ALA, Nta1p
著者Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
登録日2016-05-24
公開日2017-01-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.042 Å)
主引用文献Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016

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件を2024-08-28に公開中

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