Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EWV
DownloadVisualize
BU of 5ewv by Molmil
Crystal structure of the human BRPF1 bromodomain in complex with SEED20
分子名称: 1,5-dimethyl-[1,2,4]triazolo[4,3-a]quinoline, NITRATE ION, Peregrin
著者Zhu, J, Wiedmer, L, Caflisch, A.
登録日2015-11-21
公開日2016-11-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Crystal structure of the human BRPF1 bromodomain in complex with SEED20
To Be Published
3VQ8
DownloadVisualize
BU of 3vq8 by Molmil
HIV-1 IN core domain in complex with (3R)-3,4-dihydro-2H-chromen-3-ylmethanol
分子名称: (3R)-3,4-dihydro-2H-chromen-3-ylmethanol, CADMIUM ION, CHLORIDE ION, ...
著者Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J.
登録日2012-03-20
公開日2013-01-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification?
J Biomol Screen, 18, 2013
3VQ7
DownloadVisualize
BU of 3vq7 by Molmil
HIV-1 IN core domain in complex with 4-(1H-pyrrol-1-yl)aniline
分子名称: 4-(1H-pyrrol-1-yl)aniline, CADMIUM ION, POL polyprotein, ...
著者Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J.
登録日2012-03-20
公開日2013-01-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification?
J Biomol Screen, 18, 2013
2K95
DownloadVisualize
BU of 2k95 by Molmil
Solution structure of the wild-type P2B-P3 pseudoknot of human telomerase RNA
分子名称: Telomerase RNA P2b-P3 pseudoknot
著者Kim, N.-K, Zhang, Q, Zhou, J, Theimer, C.A, Peterson, R.D, Feigon, J.
登録日2008-09-29
公開日2008-11-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure and Dynamics of the Wild-type Pseudoknot of Human Telomerase RNA.
J.Mol.Biol., 384, 2008
8SZK
DownloadVisualize
BU of 8szk by Molmil
The cryo-EM structure of PPP2R5A/HIV-1 Vif/CBFb/EloB/EloC complex
分子名称: Core-binding factor subunit beta, Elongin-B, Elongin-C, ...
著者Hu, Y, Xiong, Y.
登録日2023-05-30
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structural insights into PPP2R5A degradation by HIV-1 Vif.
Nat.Struct.Mol.Biol., 2024
8CW4
DownloadVisualize
BU of 8cw4 by Molmil
CryoEM structure of the N-pilus from Escherichia coli
分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Conjugal transfer protein TraM
著者Bui, K.H, Black, C.S.
登録日2022-05-18
公開日2023-02-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structure of the Agrobacterium tumefaciens T-pilus reveals the importance of positive charges in the lumen.
Structure, 31, 2023
3VQA
DownloadVisualize
BU of 3vqa by Molmil
HIV-1 IN core domain in complex with 1-benzothiophen-6-amine 1,1-dioxide
分子名称: 1-benzothiophen-6-amine 1,1-dioxide, CADMIUM ION, POL polyprotein, ...
著者Wielens, J, Chalmers, D.K, Parker, M.W, Scanlon, M.J.
登録日2012-03-20
公開日2013-01-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Parallel screening of low molecular weight fragment libraries: do differences in methodology affect hit identification?
J Biomol Screen, 18, 2013
8CUE
DownloadVisualize
BU of 8cue by Molmil
CryoEM structure of the T-pilus from Agrobacterium tumefaciens
分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Protein virB2
著者Bui, K.H, Black, C.S.
登録日2022-05-17
公開日2023-02-01
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of the Agrobacterium tumefaciens T-pilus reveals the importance of positive charges in the lumen.
Structure, 31, 2023
5F8P
DownloadVisualize
BU of 5f8p by Molmil
A Novel Inhibitor of the Obesity-Related Protein FTO
分子名称: 2-OXOGLUTARIC ACID, 4-chloranyl-6-[(2~{S})-6-chloranyl-2,4,4-trimethyl-7-oxidanyl-3~{H}-chromen-2-yl]benzene-1,3-diol, Alpha-ketoglutarate-dependent dioxygenase FTO, ...
著者Chai, J, Zhou, B, Liu, W, Han, Z.
登録日2015-12-09
公開日2016-12-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of FTO-CHTB
To Be Published
2K96
DownloadVisualize
BU of 2k96 by Molmil
Solution structure of the RDC-refined P2B-P3 pseudoknot from human telomerase RNA (delta U177)
分子名称: TELOMERASE RNA P2B-P3 PSEUDOKNOT
著者Kim, N.-K, Zhang, Q, Zhou, J, Theimer, C.A, Peterson, R.D, Feigon, J.
登録日2008-09-29
公開日2008-11-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure and Dynamics of the Wild-type Pseudoknot of Human Telomerase RNA.
J.Mol.Biol., 384, 2008
8TCK
DownloadVisualize
BU of 8tck by Molmil
Apo crystal Structure of modified HIV reverse transcriptase p51 domain (FPC1)
分子名称: p51 subunit
著者Pedersen, L.C, London, R.E.
登録日2023-07-02
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Apo crystal Structure of modified HIV reverse transcriptase p51 domain (FPC2)
To Be Published
8TCL
DownloadVisualize
BU of 8tcl by Molmil
Crystal Structure of modified HIV reverse transcriptase p51 domain (FPC2) with picrate bound
分子名称: PICRIC ACID, p51 subunit
著者Pedersen, L.C, London, R.E.
登録日2023-07-02
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Apo crystal Structure of modified HIV reverse transcriptase p51 domain (FPC2)
To Be Published
8TCJ
DownloadVisualize
BU of 8tcj by Molmil
Apo crystal Structure of modified HIV reverse transcriptase p51 domain (FPC2)
分子名称: p51 subunit
著者Pedersen, L.C, London, R.E.
登録日2023-07-02
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.848 Å)
主引用文献Apo crystal Structure of modified HIV reverse transcriptase p51 domain (FPC2)
To Be Published
8TCM
DownloadVisualize
BU of 8tcm by Molmil
Crystal Structure of modified HIV reverse transcriptase p51 domain (FPC1) with picric acid and Xanthene-1,3,6,8-tetrol bound
分子名称: 9H-xanthene-1,3,6,8-tetrol, PICRIC ACID, p51 subunit
著者Pedersen, L.C, London, R.E.
登録日2023-07-02
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal Structure of modified HIV reverse transcriptase p51 domain (FPC1) with picric acid and xanthene bound
To Be Published
2KUR
DownloadVisualize
BU of 2kur by Molmil
Solution Structure of K10 TLS RNA (AU mutant in upper helix)
分子名称: K10 TLS RNA
著者Bullock, S.L, Ringel, I, Ish-Horowicz, D, Lukavsky, P.J.
登録日2010-02-25
公開日2010-05-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A'-form RNA helices are required for cytoplasmic mRNA transport in Drosophila.
Nat.Struct.Mol.Biol., 17, 2010
2KUV
DownloadVisualize
BU of 2kuv by Molmil
Solution Structure of K10 TLS RNA (GC mutant in lower helix)
分子名称: K10 TLS RNA
著者Bullock, S.L, Ringel, I, Ish-Horowicz, D, Lukavsky, P.J.
登録日2010-03-01
公開日2010-05-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A'-form RNA helices are required for cytoplasmic mRNA transport in Drosophila.
Nat.Struct.Mol.Biol., 17, 2010
5FPY
DownloadVisualize
BU of 5fpy by Molmil
Structure of hepatitis C virus (HCV) full-length NS3 complex with small-molecule ligand 5-bromo-1-methyl-1H-indole-2-carboxylic acid (AT21457) in an alternate binding site.
分子名称: 5-bromo-1-methyl-1H-indole-2-carboxylic acid, SERINE PROTEASE NS3
著者Davies, T.G, Jhoti, H, Ludlow, R.F, Saini, H.K, Tickle, I.J, Verdonk, M.
登録日2015-12-03
公開日2015-12-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Detection of Secondary Binding Sites in Proteins Using Fragment Screening.
Proc.Natl.Acad.Sci.USA, 112, 2015
5FPD
DownloadVisualize
BU of 5fpd by Molmil
Structure of heat shock-related 70kDA protein 2 with small-molecule ligand pyrazine-2-carboxamide (AT513) in an alternate binding site.
分子名称: HEAT SHOCK-RELATED 70KDA PROTEIN 2, PYRAZINE-2-CARBOXAMIDE
著者Jhoti, H, Ludlow, R.F, Patel, S, Saini, H.K, Tickle, I.J, Verdonk, M.
登録日2015-11-28
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Detection of Secondary Binding Sites in Proteins Using Fragment Screening.
Proc.Natl.Acad.Sci.USA, 112, 2015
6HQ1
DownloadVisualize
BU of 6hq1 by Molmil
Solution structure of the globular domain from human histone H1.0
分子名称: Histone H1.0
著者Martinsen, J.H, Bugge, K, Kragelund, B.B.
登録日2018-09-23
公開日2019-10-09
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Micromolar affinity association of an IDP and a folded protein without the involvement of persistent binding sites
To Be Published
6I9N
DownloadVisualize
BU of 6i9n by Molmil
JmjC domain-containing protein 5 (JMJD5) in complex with Mn and L-2-hydroxyglutarate
分子名称: (2S)-2-HYDROXYPENTANEDIOIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2018-11-24
公開日2019-12-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.361 Å)
主引用文献Structural analysis of the 2-oxoglutarate binding site of the circadian rhythm linked oxygenase JMJD5.
Sci Rep, 12, 2022
2J7O
DownloadVisualize
BU of 2j7o by Molmil
STRUCTURE OF THE RNAI POLYMERASE FROM NEUROSPORA CRASSA
分子名称: MAGNESIUM ION, RNA DEPENDENT RNA POLYMERASE
著者Salgado, P.S, Koivunen, M.R.L, Makeyev, E.V, Bamford, D.H, Stuart, D.I, Grimes, J.M.
登録日2006-10-13
公開日2006-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The Structure of an Rnai Polymerase Links RNA Silencing and Transcription.
Plos Biol., 4, 2006
6I3Y
DownloadVisualize
BU of 6i3y by Molmil
Crystal structure of the human mitochondrial PRELID1K58V-TRIAP1 complex with PS
分子名称: DODECYL-BETA-D-MALTOSIDE, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, PRELI domain-containing protein 1, ...
著者Miliara, X, Berry, J.-L, Morgan, R.M.L, Matthews, S.J.
登録日2018-11-08
公開日2019-03-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Structural determinants of lipid specificity within Ups/PRELI lipid transfer proteins.
Nat Commun, 10, 2019
5FPT
DownloadVisualize
BU of 5fpt by Molmil
Structure of hepatitis C virus (HCV) full-length NS3 complex with small-molecule ligand 2-(1-methyl-1H-indol-3-yl)acetic acid (AT3437) in an alternate binding site.
分子名称: (1-methyl-1H-indol-3-yl)acetic acid, HEPATITIS C VIRUS FULL-LENGTH NS3 COMPLEX
著者Jhoti, H, Ludlow, R.F, Saini, H.K, Tickle, I.J, Verdonk, M, Pathuri, P, Williams, P.A.
登録日2015-12-02
公開日2015-12-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Detection of Secondary Binding Sites in Proteins Using Fragment Screening.
Proc.Natl.Acad.Sci.USA, 112, 2015
3FL2
DownloadVisualize
BU of 3fl2 by Molmil
Crystal structure of the ring domain of the E3 ubiquitin-protein ligase UHRF1
分子名称: E3 ubiquitin-protein ligase UHRF1, ZINC ION
著者Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2008-12-18
公開日2009-01-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of the Ring Domain of the E3 Ubiquitin-Protein Ligase Uhrf1
To be Published
6I9M
DownloadVisualize
BU of 6i9m by Molmil
JmjC domain-containing protein 5 (JMJD5) in complex with Mn and R-2-hydroxyglutarate
分子名称: (2R)-2-hydroxypentanedioic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2018-11-23
公開日2019-12-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural analysis of the 2-oxoglutarate binding site of the circadian rhythm linked oxygenase JMJD5.
Sci Rep, 12, 2022

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon