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2DX2
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BU of 2dx2 by Molmil
NMR structure of TP (Target Peptide): monomeric 3_10 helix
分子名称: Target Peptide
著者Tamura, A, Araki, M.
登録日2006-08-23
公開日2007-01-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Transformation of an alpha-helix peptide into a beta-hairpin induced by addition of a fragment results in creation of a coexisting state.
Proteins, 66, 2006
2DX3
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BU of 2dx3 by Molmil
NMR structure of DP5_conformation1: monomeric alpha-helix
分子名称: DP5_conformation1
著者Tamura, A, Araki, M.
登録日2006-08-23
公開日2007-01-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Transformation of an alpha-helix peptide into a beta-hairpin induced by addition of a fragment results in creation of a coexisting state.
Proteins, 66, 2006
2DX4
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BU of 2dx4 by Molmil
NMR structure of DP5_conformation2: monomeric beta-hairpin
分子名称: DP5_conformation2
著者Tamura, A, Araki, M.
登録日2006-08-23
公開日2007-01-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Transformation of an alpha-helix peptide into a beta-hairpin induced by addition of a fragment results in creation of a coexisting state.
Proteins, 66, 2006
2DX5
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BU of 2dx5 by Molmil
The complex structure between the mouse EAP45-GLUE domain and ubiquitin
分子名称: Ubiquitin, Vacuolar protein sorting protein 36
著者Hirano, S, Suzuki, N, Slagsvold, T, Kawasaki, M, Trambaiolo, D, Kato, R, Stenmark, H, Wakatsuki, S.
登録日2006-08-24
公開日2006-10-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structural basis of ubiquitin recognition by mammalian Eap45 GLUE domain
Nat.Struct.Mol.Biol., 13, 2006
2DX6
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BU of 2dx6 by Molmil
Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8
分子名称: ACETATE ION, Hypothetical protein TTHA0132, ISOPROPYL ALCOHOL
著者Kishishita, S, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-24
公開日2007-02-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of conserved hypothetical protein, TTHA0132 from Thermus thermophilus HB8
To be Published
2DX7
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BU of 2dx7 by Molmil
Crystal structure of Pyrococcus horikoshii OT3 aspartate racemase complex with citric acid
分子名称: CITRIC ACID, aspartate racemase
著者Ohtaki, A, Arakawa, T, Iizuka, R, Odaka, M, Yohda, M.
登録日2006-08-24
公開日2007-08-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of aspartate racemase complexed with a dual substrate analogue, citric acid, and implications for the reaction mechanism.
Proteins, 70, 2008
2DX8
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BU of 2dx8 by Molmil
Crystal Structure Analysis of the PHD domain of the Transcription Coactivator Pygophus
分子名称: Pygopus homolog 1, ZINC ION
著者Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-24
公開日2007-05-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure Analysis of the PHD Domain of the Transcription Coactivator Pygopus
To be Published
2DXA
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BU of 2dxa by Molmil
Crystal structure of trans editing enzyme ProX from E.coli
分子名称: CHLORIDE ION, Protein ybaK
著者Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-25
公開日2007-02-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of trans editing enzyme ProX from E.coli
To be Published
2DXB
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BU of 2dxb by Molmil
Recombinant thiocyanate hydrolase comprising partially-modified cobalt centers
分子名称: COBALT (III) ION, PHOSPHATE ION, Thiocyanate hydrolase subunit alpha, ...
著者Arakawa, T, Kawano, Y, Katayama, Y, Yohda, M, Odaka, M.
登録日2006-08-25
公開日2007-08-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
J.Am.Chem.Soc., 131, 2009
2DXC
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BU of 2dxc by Molmil
Recombinant thiocyanate hydrolase, fully-matured form
分子名称: COBALT (III) ION, L(+)-TARTARIC ACID, Thiocyanate hydrolase subunit alpha, ...
著者Arakawa, T, Kawano, Y, Katayama, Y, Yohda, M, Odaka, M.
登録日2006-08-25
公開日2007-08-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
J.Am.Chem.Soc., 131, 2009
2DXD
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BU of 2dxd by Molmil
Crystal structure of nucleoside diphosphate kinase in complex with ATP analog
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Nucleoside diphosphate kinase
著者Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-25
公開日2007-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of nucleoside diphosphate kinase in complex with ATP analog
To be Published
2DXE
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BU of 2dxe by Molmil
Crystal structure of nucleoside diphosphate kinase in complex with GDP
分子名称: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-25
公開日2007-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of nucleoside diphosphate kinase in complex with GDP
To be Published
2DXF
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BU of 2dxf by Molmil
Crystal structure of nucleoside diphosphate kinase in complex with GTP analog
分子名称: CHLORIDE ION, Nucleoside diphosphate kinase, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-25
公開日2007-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of nucleoside diphosphate kinase in complex with GTP analog
To be Published
2DXI
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BU of 2dxi by Molmil
2.2 A crystal structure of glutamyl-tRNA synthetase from Thermus thermophilus complexed with tRNA(Glu), ATP, and L-glutamol
分子名称: (4S)-4-AMINO-5-HYDROXYPENTANOIC ACID, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-28
公開日2006-10-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural bases of transfer RNA-dependent amino acid recognition and activation by glutamyl-tRNA synthetase
Structure, 14, 2006
2DXL
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BU of 2dxl by Molmil
Glycerophosphodiesterase from Enterobacter aerogenes
分子名称: COBALT (II) ION, Phosphohydrolase
著者Jackson, C.J, Carr, P.D, Ollis, D.L.
登録日2006-08-28
公開日2007-05-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure and function of a novel glycerophosphodiesterase from Enterobacter aerogenes
J.Mol.Biol., 367, 2007
2DXM
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BU of 2dxm by Molmil
Neutron Structure Analysis of Deoxy Human Hemoglobin
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Morimoto, Y.
登録日2006-08-28
公開日2007-12-04
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (2.1 Å)
主引用文献Protonation states of buried histidine residues in human deoxyhemoglobin revealed by neutron crystallography.
J.Am.Chem.Soc., 129, 2007
2DXN
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BU of 2dxn by Molmil
Glycerophosphodiesterase from Enterobacter aerogenes
分子名称: Phosphohydrolase, ZINC ION
著者Jackson, C.J, Carr, P.D, Ollis, D.L.
登録日2006-08-28
公開日2007-05-22
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献The structure and function of a novel glycerophosphodiesterase from Enterobacter aerogenes
J.Mol.Biol., 367, 2007
2DXP
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BU of 2dxp by Molmil
Crystal structure of the complex of the archaeal sulfolobus PTP-fold phosphatase with phosphopeptides A-(p)Y-R
分子名称: A(PTR)R, Sulfolobus solfataricus protein tyrosine phosphatase
著者Chu, H.M, Wang, A.H.J.
登録日2006-08-29
公開日2007-03-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Enzyme-substrate interactions revealed by the crystal structures of the archaeal Sulfolobus PTP-fold phosphatase and its phosphopeptide complexes
Proteins, 66, 2006
2DXQ
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BU of 2dxq by Molmil
Putative acetyltransferase from Agrobacterium tumefaciens str. C58
分子名称: Acetyltransferase, PHOSPHATE ION
著者Binkowski, T.A, Xu, X, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-08-30
公開日2006-09-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Putative acetyltransferase from Agrobacterium tumefaciens str. C58
To be published
2DXR
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BU of 2dxr by Molmil
Crystal structure of the complex formed between C-terminal half of bovine lactoferrin and sorbitol at 2.85 A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
著者Mir, R, Prem kumar, R, Sinha, M, Singh, N, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
登録日2006-08-30
公開日2006-09-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure of the complex formed between C-terminal half of bovine lactoferrin and sorbitol at 2.85 A resolution
To be Published
2DXS
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BU of 2dxs by Molmil
Crystal structure of HCV NS5B RNA polymerase complexed with a tetracyclic inhibitor
分子名称: Genome polyprotein, N-[(13-CYCLOHEXYL-6,7-DIHYDROINDOLO[1,2-D][1,4]BENZOXAZEPIN-10-YL)CARBONYL]-2-METHYL-L-ALANINE
著者Adachi, T, Tsuruha, J, Doi, S, Murase, K, Ikegashira, K, Watanabe, S, Uehara, K, Orita, T, Nomura, A, Kamada, M.
登録日2006-08-30
公開日2006-12-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of Conformationally Constrained Tetracyclic Compounds as Potent Hepatitis C Virus NS5B RNA Polymerase Inhibitors
J.Med.Chem., 49, 2006
2DXT
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BU of 2dxt by Molmil
Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Complexed with ATP and Biotin, Mutation D104A
分子名称: ADENOSINE-5'-TRIPHOSPHATE, BIOTIN, biotin--[acetyl-CoA-carboxylase] ligase
著者Bagautdinov, B, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-30
公開日2007-03-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Ligand Structures Of Biotin Protein Ligase From Pyrococcus Horikoshii Ot3
To be Published
2DXU
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BU of 2dxu by Molmil
Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Complexed with Biotinyl-5'-AMP, Mutation R48A
分子名称: BIOTINYL-5-AMP, biotin--[acetyl-CoA-carboxylase] ligase
著者Bagautdinov, B, Taketa, M, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-30
公開日2007-03-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
J.Biol.Chem., 283, 2008
2DXV
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BU of 2dxv by Molmil
Crystal structure of Glu54 to His mutant of Diphthine synthase
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Mizutani, H, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-31
公開日2007-03-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
2DXW
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BU of 2dxw by Molmil
Crystal structure of Glu54 to Lys mutant of Diphthine synthase
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Mizutani, H, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-31
公開日2007-03-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published

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件を2024-09-04に公開中

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