PDB: 8267 件ウェブページステータス検索Chemie searchBIRD

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7D59	cryo-EM structure of human RNA polymerase III in apo state 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Wang, Q, Wan, F, Lan, P, Wu, J, Lei, M. 登録日 2020-09-25 公開日 2021-02-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural insights into transcriptional regulation of human RNA polymerase III. Nat.Struct.Mol.Biol., 28, 2021
7DN3	Structure of Human RNA Polymerase III elongation complex 分子名称: DNA (5'-D(P*TP*CP*GP*TP*CP*TP*GP*AP*TP*CP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*CP*GP*AP*GP*AP*TP*CP*AP*GP*AP*CP*GP*AP*GP*AP*TP*CP*GP*GP*G)-3'), DNA-directed RNA polymerase III subunit RPC1, ... 著者 Li, L, Yu, Z, Zhao, D, Ren, Y, Hou, H, Xu, Y. 登録日 2020-12-08 公開日 2021-03-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of human RNA polymerase III elongation complex. Cell Res., 31, 2021
5W5Y	RNA polymerase I Initial Transcribing Complex 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-07-26 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
5W66	RNA polymerase I Initial Transcribing Complex State 3 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Han, Y, He, Y. 登録日 2017-06-16 公開日 2017-07-26 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
7NKY	RNA Polymerase II-Spt4/5-nucleosome-FACT structure 分子名称: Chromatin elongation factor SPT4, DNA (138-MER), DNA (148-MER), ... 著者 Farnung, L, Ochmann, M, Engeholm, M, Cramer, P. 登録日 2021-02-19 公開日 2021-07-07 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis of nucleosome transcription mediated by Chd1 and FACT. Nat.Struct.Mol.Biol., 28, 2021
2NVY	RNA Polymerase II form II in 150 mM Mn+2 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, DNA-directed RNA polymerase II 45 kDa polypeptide, ... 著者 Wang, D, Bushnell, D.A, Westover, K.D, Kaplan, C.D, Kornberg, R.D. 登録日 2006-11-13 公開日 2006-12-26 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis Cell(Cambridge,Mass.), 127, 2006
7OQY	Cryo-EM structure of the cellular negative regulator TFS4 bound to the archaeal RNA polymerase 分子名称: Conserved protein, DNA-directed RNA polymerase subunit A', DNA-directed RNA polymerase subunit A'', ... 著者 Pilotto, S, Fouqueau, T, Lukoyanova, N, Sheppard, C, Lucas-Staat, S, Diaz-Santin, L.M, Matelska, D, Prangishvili, D, Cheung, A.C.M, Werner, F. 登録日 2021-06-04 公開日 2021-08-25 最終更新日 2021-11-03 実験手法 ELECTRON MICROSCOPY (2.61 Å) 主引用文献 Structural basis of RNA polymerase inhibition by viral and host factors. Nat Commun, 12, 2021
7OQ4	Cryo-EM structure of the ATV RNAP Inhibitory Protein (RIP) bound to the DNA-binding channel of the host's RNA polymerase 分子名称: Conserved protein, DNA-directed RNA polymerase subunit A', DNA-directed RNA polymerase subunit A'', ... 著者 Pilotto, S, Fouqueau, T, Lukoyanova, N, Sheppard, C, Lucas-Staat, S, Diaz-Santin, L.M, Matelska, D, Prangishvili, D, Cheung, A.C.M, Werner, F. 登録日 2021-06-02 公開日 2021-08-25 最終更新日 2021-10-13 実験手法 ELECTRON MICROSCOPY (3.27 Å) 主引用文献 Structural basis of RNA polymerase inhibition by viral and host factors. Nat Commun, 12, 2021
4A8O	Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation 分子名称: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE 著者 Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M. 登録日 2011-11-21 公開日 2012-07-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation. J.Virol., 86, 2012
1J2X	Crystal structure of RAP74 C-terminal domain complexed with FCP1 C-terminal peptide 分子名称: RNA polymerase II CTD phosphatase, SULFATE ION, Transcription initiation factor IIF, ... 著者 Kamada, K, Roeder, R.G, Burley, S.K. 登録日 2003-01-15 公開日 2003-01-30 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular mechanism of recruitment of TFIIF- associating RNA polymerase C-terminal domain phosphatase (FCP1) by transcription factor IIF Proc.Natl.Acad.Sci.USA, 100, 2003
3NFF	Crystal structure of extended Dimerization module of RNA polymerase I subcomplex A49/A34.5 分子名称: RNA polymerase I subunit A34.5, RNA polymerase I subunit A49 著者 Geiger, S.R, Lorenzen, K, Schreieck, A, Hanecker, P, Kostrewa, D, Heck, A.J.R, Cramer, P. 登録日 2010-06-10 公開日 2010-09-08 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.24 Å) 主引用文献 RNA Polymerase I Contains a TFIIF-Related DNA-Binding Subcomplex. Mol.Cell, 39, 2010
7OK0	Cryo-EM structure of the Sulfolobus acidocaldarius RNA polymerase at 2.88 A 分子名称: Conserved protein, DNA-directed RNA polymerase subunit A', DNA-directed RNA polymerase subunit A'', ... 著者 Pilotto, S, Fouqueau, T, Lukoyanova, N, Sheppard, C, Lucas-Staat, S, Diaz-Santin, L.M, Matelska, D, Prangishvili, D, Cheung, A.C.M, Werner, F. 登録日 2021-05-17 公開日 2021-08-25 最終更新日 2021-10-13 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis of RNA polymerase inhibition by viral and host factors. Nat Commun, 12, 2021
5D9A	Influenza C Virus RNA-dependent RNA Polymerase - Space group P212121 分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA-directed RNA polymerase catalytic subunit 著者 Hengrung, N, El Omari, K, Serna Martin, I, Vreede, F.T, Cusack, S, Rambo, R.P, Vonrhein, C, Bricogne, G, Stuart, D.I, Grimes, J.M, Fodor, E. 登録日 2015-08-18 公開日 2015-10-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 Crystal structure of the RNA-dependent RNA polymerase from influenza C virus. Nature, 527, 2015
1QYP	THERMOCOCCUS CELER RPB9, NMR, 25 STRUCTURES 分子名称: RNA POLYMERASE II, ZINC ION 著者 Wang, B, Jones, D.N.M, Kaine, B.P, Weiss, M.A. 登録日 1997-08-19 公開日 1997-12-24 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 High-resolution structure of an archaeal zinc ribbon defines a general architectural motif in eukaryotic RNA polymerases. Structure, 6, 1998
1EIK	Solution Structure of RNA Polymerase Subunit RPB5 from Methanobacterium Thermoautotrophicum 分子名称: RNA POLYMERASE SUBUNIT RPB5 著者 Yee, A, Booth, V, Dharamsi, A, Engel, A, Edwards, A.M, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG) 登録日 2000-02-25 公開日 2000-06-21 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the RNA polymerase subunit RPB5 from Methanobacterium thermoautotrophicum. Proc.Natl.Acad.Sci.USA, 97, 2000
5FJ9	Cryo-EM structure of yeast apo RNA polymerase III at 4.6 A 分子名称: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2, ... 著者 Hoffmann, N.A, Jakobi, A.J, Moreno-Morcillo, M, Glatt, S, Kosinski, J, Hagen, W.J, Sachse, C, Muller, C.W. 登録日 2015-10-06 公開日 2015-11-25 最終更新日 2019-10-30 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Molecular Structures of Unbound and Transcribing RNA Polymerase III. Nature, 528, 2015
5FJA	Cryo-EM structure of yeast RNA polymerase III at 4.7 A 分子名称: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2, ... 著者 Hoffmann, N.A, Jakobi, A.J, Moreno-Morcillo, M, Glatt, S, Kosinski, J, Hagen, W.J, Sachse, C, Muller, C.W. 登録日 2015-10-06 公開日 2015-11-25 最終更新日 2017-08-02 実験手法 ELECTRON MICROSCOPY (4.65 Å) 主引用文献 Molecular Structures of Unbound and Transcribing RNA Polymerase III. Nature, 528, 2015
7Z0H	Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.6 A (focus subunit AC40). 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Nguyen, P.Q, Huecas, S, Plaza-Pegueroles, A, Fernandez-Tornero, C. 登録日 2022-02-22 公開日 2023-04-05 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration. Nat Commun, 14, 2023
7Z2Z	Structure of yeast RNA Polymerase III-DNA-Ty1 integrase complex (Pol III-DNA-IN1) at 3.1 A 分子名称: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Nguyen, P.Q, Fernandez-Tornero, C. 登録日 2022-03-01 公開日 2023-04-05 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration. Nat Commun, 14, 2023
7Z31	Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.7 A (focus subunit C11, no C11 C-terminal Zn-ribbon in the funnel pore). 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Nguyen, P.Q, Huecas, S, Plaza-Pegueroles, A, Fernandez-Tornero, C. 登録日 2022-03-01 公開日 2023-04-05 実験手法 ELECTRON MICROSCOPY (2.76 Å) 主引用文献 Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration. Nat Commun, 14, 2023
7Z30	Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.9 A (focus subunit C11 terminal Zn-ribbon in the funnel pore). 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Nguyen, P.Q, Fernandez-Tornero, C. 登録日 2022-03-01 公開日 2023-04-05 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration. Nat Commun, 14, 2023
5LMX	Monomeric RNA polymerase I at 4.9 A resolution 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Torreira, E, Louro, J.A, Gil-Carton, D, Gallego, O, Calvo, O, Fernandez-Tornero, C. 登録日 2016-08-02 公開日 2017-03-22 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 The dynamic assembly of distinct RNA polymerase I complexes modulates rDNA transcription. Elife, 6, 2017
7S01	X-ray structure of the phage AR9 non-virion RNA polymerase holoenzyme in complex with a forked oligonucleotide containing the P077 promoter 分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase beta subunit, DNA-directed RNA polymerase beta' subunit, ... 著者 Leiman, P.G, Sokolova, M.L, Gordeeva, J, Fraser, A, Severinov, K.V. 登録日 2021-08-28 公開日 2022-07-06 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural basis of template strand deoxyuridine promoter recognition by a viral RNA polymerase. Nat Commun, 13, 2022
7S00	X-ray structure of the phage AR9 non-virion RNA polymerase core 分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase beta subunit, DNA-directed RNA polymerase beta' subunit, ... 著者 Leiman, P.G, Sokolova, M.L, Fraser, A. 登録日 2021-08-28 公開日 2022-07-06 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural basis of template strand deoxyuridine promoter recognition by a viral RNA polymerase. Nat Commun, 13, 2022
4NC8	N-terminal domain of delta-subunit of RNA polymerase complexed with nickel ions 分子名称: DNA-directed RNA polymerase subunit delta, NICKEL (II) ION 著者 Demo, G, Papouskova, V, Komarek, J, Sanderova, H, Rabatinova, A, Krasny, L, Zidek, L, Sklenar, V, Wimmerova, M. 登録日 2013-10-24 公開日 2014-07-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase. J.Struct.Biol., 187, 2014

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