PDB: 14265 件ウェブページステータス検索Chemie searchBIRD

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4V1O	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (9.7 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
7OGP	Structure of the apo-state of the bacteriophage PhiKZ non-virion RNA polymerase - class including clamp 分子名称: DNA-directed RNA polymerase, PHIKZ055, PHIKZ068, ... 著者 de Martin Garrido, N, Lai Wan Loong, Y.T.E, Yakunina, M, Aylett, C.H.S. 登録日 2021-05-07 公開日 2021-07-07 最終更新日 2023-11-22 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structure of the bacteriophage PhiKZ non-virion RNA polymerase. Nucleic Acids Res., 49, 2021
7OGR	Structure of the apo-state of the bacteriophage PhiKZ non-virion RNA polymerase 分子名称: DNA-directed RNA polymerase, PHIKZ055, PHIKZ068, ... 著者 de Martin Garrido, N, Lai Wan Loong, Y.T.E, Yakunina, M, Aylett, C.H.S. 登録日 2021-05-07 公開日 2021-07-07 最終更新日 2023-11-22 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structure of the bacteriophage PhiKZ non-virion RNA polymerase. Nucleic Acids Res., 49, 2021
2D7S	Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with VPg protein 分子名称: RNA-dependent RNA polymerase, VPg1 protein 著者 Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N. 登録日 2005-11-29 公開日 2006-03-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structure of a protein primer-polymerase complex in the initiation of genome replication Embo J., 25, 2006
4V1M	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP)-3', 5'-D(*CP*CP*AP*GP*GP*AP)-3', 5'-D(*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*CP *CP*BRUP*GP*GP*TP*C)-3', ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (6.6 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
8Q3B	The closed state of the ASFV apo-RNA polymerase 分子名称: DNA-directed RNA polymerase RPB1 homolog, DNA-directed RNA polymerase RPB10 homolog, DNA-directed RNA polymerase RPB2 homolog, ... 著者 Pilotto, S, Sykora, M, Cackett, G, Werner, F. 登録日 2023-08-03 公開日 2024-02-14 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.69 Å) 主引用文献 Structure of the recombinant RNA polymerase from African Swine Fever Virus. Nat Commun, 15, 2024
8Q3K	The open state of the ASFV apo-RNA polymerase 分子名称: DNA-directed RNA polymerase RPB1 homolog, DNA-directed RNA polymerase RPB10 homolog, DNA-directed RNA polymerase RPB2 homolog, ... 著者 Pilotto, S, Sykora, M, Cackett, G, Werner, F. 登録日 2023-08-04 公開日 2024-02-14 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.92 Å) 主引用文献 Structure of the recombinant RNA polymerase from African Swine Fever Virus. Nat Commun, 15, 2024
4X6A	Crystal structure of yeast RNA polymerase II encountering oxidative Cyclopurine DNA lesions 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Wang, L, Chong, J, Wang, D. 登録日 2014-12-07 公開日 2015-02-04 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (3.96 Å) 主引用文献 Mechanism of RNA polymerase II bypass of oxidative cyclopurine DNA lesions. Proc.Natl.Acad.Sci.USA, 112, 2015
4X67	Crystal structure of elongating yeast RNA polymerase II stalled at oxidative Cyclopurine DNA lesions. 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Wang, L, Chong, J, Wang, D. 登録日 2014-12-07 公開日 2015-02-04 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (4.1 Å) 主引用文献 Mechanism of RNA polymerase II bypass of oxidative cyclopurine DNA lesions. Proc.Natl.Acad.Sci.USA, 112, 2015
9FEJ	Structure of the RNA-dependent RNA polymerase P2 from the bacteriophage Phi8 分子名称: CALCIUM ION, RNA-directed RNA polymerase 著者 Latimer-Smith, M, Salgado, P.S, Forsyth, I, Makeyev, E, Poranen, M, Stuart, D.I, Grimes, J.M, El Omari, K. 登録日 2024-05-20 公開日 2024-10-16 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of the RNA-dependent RNA polymerase P2 from the cystovirus phi 8. Sci Rep, 14, 2024
8QMA	Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 do Prado, P.F.V, Ahrens, F.M, Pfannschmidt, T, Hillen, H.S. 登録日 2023-09-21 公開日 2024-03-06 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of the multi-subunit chloroplast RNA polymerase. Mol.Cell, 84, 2024
4V8S	Archaeal RNAP-DNA binary complex at 4.32Ang 分子名称: 5'-D(*AP*TP*AP*GP*AP*GP*TP*AP*TP*AP*AP*GP*AP*TP *AP*G)-3', 5'-D(*TP*CP*TP*TP*AP*TP*AP*CP*TP*CP*TP*AP*TP*CP)-3', DNA-DIRECTED RNA POLYMERASE, ... 著者 Wojtas, M.N, Mogni, M, Millet, O, Bell, S.D, Abrescia, N.G.A. 登録日 2012-07-12 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (4.323 Å) 主引用文献 Structural and Functional Analyses of the Interaction of Archaeal RNA Polymerase with DNA. Nucleic Acids Res., 40, 2012
6I84	Structure of transcribing RNA polymerase II-nucleosome complex 分子名称: DNA (158-MER), DNA (170-MER), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Farnung, L, Vos, S.M, Cramer, P. 登録日 2018-11-19 公開日 2019-01-02 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structure of transcribing RNA polymerase II-nucleosome complex. Nat Commun, 9, 2018
5FMF	the P-lobe of RNA polymerase II pre-initiation complex 分子名称: DNA REPAIR HELICASE RAD25, SSL2, DNA REPAIR HELICASE RAD3, ... 著者 Murakami, K, Tsai, K, Kalisman, N, Bushnell, D.A, Asturias, F.J, Kornberg, R.D. 登録日 2015-11-03 公開日 2015-11-25 最終更新日 2017-07-12 実験手法 ELECTRON MICROSCOPY (6 Å) 主引用文献 Structure of an RNA Polymerase II Pre-Initiation Complex Proc.Natl.Acad.Sci.USA, 112, 2015
6XRE	Structure of the p53/RNA polymerase II assembly 分子名称: Cellular tumor antigen p53, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 Liou, S.-H, Singh, S, Singer, R.H, Coleman, R.A, Liu, W. 登録日 2020-07-12 公開日 2021-03-24 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structure of the p53/RNA polymerase II assembly. Commun Biol, 4, 2021
5C4J	Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Barnes, C.O, Calero, M, Malik, I, Spahr, H, Zhang, Q, Pullara, F, Kaplan, C.D, Calero, G. 登録日 2015-06-18 公開日 2015-08-26 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. Mol.Cell, 59, 2015
6AWB	Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state 分子名称: 16S rRNA, 30S ribosomal protein S1, 30S ribosomal protein S10, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
6AWD	Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (8.1 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
6AWC	Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state 分子名称: 16S rRNA, 30S ribosomal protein S1, 30S ribosomal protein S10, ... 著者 Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A. 登録日 2017-09-05 公開日 2017-10-18 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (7.9 Å) 主引用文献 Structure of RNA polymerase bound to ribosomal 30S subunit. Elife, 6, 2017
5OIK	Structure of an RNA polymerase II-DSIF transcription elongation complex 分子名称: DNA (43-MER), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... 著者 Bernecky, C, Plitzko, J.M, Cramer, P. 登録日 2017-07-18 公開日 2017-09-13 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp. Nat. Struct. Mol. Biol., 24, 2017
4Y7N	The Structure Insight into 5-Carboxycytosine Recognition by RNA Polymerase II during Transcription Elongation. 分子名称: DNA (29-MER), DNA (5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Wang, L, Chong, J, Wang, D. 登録日 2015-02-15 公開日 2015-07-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Molecular basis for 5-carboxycytosine recognition by RNA polymerase II elongation complex. Nature, 523, 2015
4Y52	Crystal structure of 5-Carboxycytosine Recognition by RNA Polymerase II during Transcription Elongation. 分子名称: DNA (29-MER), DNA (5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Wang, L, Chong, J, Wang, D. 登録日 2015-02-11 公開日 2015-07-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Molecular basis for 5-carboxycytosine recognition by RNA polymerase II elongation complex. Nature, 523, 2015
6TPS	early intermediate RNA Polymerase I Pre-initiation complex - eiPIC 分子名称: DNA foreign, DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, ... 著者 Pilsl, M, Engel, C. 登録日 2019-12-14 公開日 2020-03-18 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 Structural basis of RNA polymerase I pre-initiation complex formation and promoter melting. Nat Commun, 11, 2020
7VBA	Structure of the pre state human RNA Polymerase I Elongation Complex 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3'), DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3'), ... 著者 Zhao, D, Liu, W, Chen, K, Yang, H, Xu, Y. 登録日 2021-08-31 公開日 2022-02-16 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 Structure of the human RNA polymerase I elongation complex. Cell Discov, 7, 2021
7VBC	Back track state of human RNA Polymerase I Elongation Complex 分子名称: DNA (5'-D(*GP*TP*AP*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*G)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*AP*GP*CP*GP*TP*GP*TP*CP*AP*GP*CP*AP*AP*TP*A)-3'), DNA-directed RNA polymerase I subunit RPA1, ... 著者 Zhao, D, Liu, W, Chen, K, Yang, H, Xu, Y. 登録日 2021-08-31 公開日 2022-02-16 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.01 Å) 主引用文献 Structure of the human RNA polymerase I elongation complex. Cell Discov, 7, 2021

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