PDB: 178322 件ウェブページステータス検索Chemie searchBIRD

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3PKB	M. tuberculosis MetAP with bengamide analog Y16, in Mn form 分子名称: (E,2R,3R,4S,5R)-N-(2-azanyl-2-oxidanylidene-ethyl)-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, CHLORIDE ION, MANGANESE (II) ION, ... 著者 Ye, Q.Z, Lu, J.P. 登録日 2010-11-11 公開日 2011-04-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Inhibition of Mycobacterium tuberculosis Methionine Aminopeptidases by Bengamide Derivatives. Chemmedchem, 6, 2011
3ODL	Crystal structure of cyclophilin A in complex with Voclosporin Z-ISA247 分子名称: Cyclophilin A, Voclosporin 著者 Kuglstatter, A, Stihle, M, Benz, J, Hennig, M. 登録日 2010-08-11 公開日 2011-02-16 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Structural basis for the cyclophilin A binding affinity and immunosuppressive potency of E-ISA247 (voclosporin). Acta Crystallogr.,Sect.D, 67, 2011
7V7W	Crystal Structure of the Heterodimeric HIF-3a:ARNT Complex with oleoylethanolamide (OEA) 分子名称: (Z)-N-(2-hydroxyethyl)octadec-9-enamide, Aryl hydrocarbon receptor nuclear translocator, Hypoxia-inducible factor 3-alpha 著者 Diao, X, Ren, X, Li, F.W, Zhang, M, Sun, X, Wu, D. 登録日 2021-08-21 公開日 2022-05-18 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.507 Å) 主引用文献 Identification of oleoylethanolamide as an endogenous ligand for HIF-3 alpha. Nat Commun, 13, 2022
7CN3	2,5-dihydroxypridine Dioxygenase in complex with 2,5-dihydroxypridine and product N-formylmaleamic acid 分子名称: (~{Z})-4-formamido-4-oxidanylidene-but-2-enoic acid, 1,2-ETHANEDIOL, 2,5-dihydroxypyridine 5,6-dioxygenase, ... 著者 Liu, G.Q, Tang, H.Z. 登録日 2020-07-30 公開日 2020-12-16 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 2,5-dihydroxypridine Dioxygenase in complex with 2,5-dihydroxypridine and product N-formylmaleamic acid Nat Commun, 2020
8EIU	E. coli 70S ribosome with A-loop mutations U2554C and U2555C 分子名称: 16S rRNA, 23S rRNA, 3'-amino-3'-deoxyadenosine 5'-(dihydrogen phosphate), ... 著者 Nissley, A.J, Penev, P.I, Watson, Z.L, Banfield, J.F, Cate, J.H.D. 登録日 2022-09-15 公開日 2023-02-01 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.24 Å) 主引用文献 Rare ribosomal RNA sequences from archaea stabilize the bacterial ribosome. Nucleic Acids Res., 51, 2023
2Q94	E. coli methionine aminopeptidase Mn-form with inhibitor A04 分子名称: 5-[2-(TRIFLUOROMETHOXY)PHENYL]-2-FUROIC ACID, MANGANESE (II) ION, Methionine aminopeptidase, ... 著者 Ye, Q.-Z. 登録日 2007-06-12 公開日 2008-01-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Structural analysis of inhibition of E. coli methionine aminopeptidase: implication of loop flexibility in selective inhibition of bacterial enzymes. Bmc Struct.Biol., 7, 2007
2Q92	E. coli methionine aminopeptidase Mn-form with inhibitor B23 分子名称: 5-(2-NITROPHENYL)-2-FUROIC ACID, MANGANESE (II) ION, Methionine aminopeptidase, ... 著者 Ye, Q.-Z. 登録日 2007-06-12 公開日 2008-01-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural analysis of inhibition of E. coli methionine aminopeptidase: implication of loop flexibility in selective inhibition of bacterial enzymes. Bmc Struct.Biol., 7, 2007
2Q93	E. coli methionine aminopeptidase Mn-form with inhibitor B21 分子名称: 5-(2-METHOXYPHENYL)-2-FUROIC ACID, MANGANESE (II) ION, Methionine aminopeptidase, ... 著者 Ye, Q.-Z. 登録日 2007-06-12 公開日 2008-01-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural analysis of inhibition of E. coli methionine aminopeptidase: implication of loop flexibility in selective inhibition of bacterial enzymes. Bmc Struct.Biol., 7, 2007
2Q95	E. coli methionine aminopeptidase Mn-form with inhibitor A05 分子名称: 5-(2-CHLORO-4-NITROPHENYL)-2-FUROIC ACID, MANGANESE (II) ION, Methionine aminopeptidase, ... 著者 Ye, Q.-Z. 登録日 2007-06-12 公開日 2008-01-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural analysis of inhibition of E. coli methionine aminopeptidase: implication of loop flexibility in selective inhibition of bacterial enzymes. Bmc Struct.Biol., 7, 2007
2Q96	E. coli methionine aminopeptidase Mn-form with inhibitor A18 分子名称: 5-(2-CHLOROBENZYL)-2-FUROIC ACID, MANGANESE (II) ION, Methionine aminopeptidase, ... 著者 Ye, Q.-Z. 登録日 2007-06-12 公開日 2008-01-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural analysis of inhibition of E. coli methionine aminopeptidase: implication of loop flexibility in selective inhibition of bacterial enzymes. Bmc Struct.Biol., 7, 2007
4TZ3	Ensemble refinement of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminaritetraose 分子名称: 1,2-ETHANEDIOL, Putative secreted protein, beta-D-glucopyranose, ... 著者 Bianchetti, C.M, Takasuka, T.E, Yik, E.J, Bergeman, L.F, Fox, B.G. 登録日 2014-07-09 公開日 2015-03-18 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Active site and laminarin binding in glycoside hydrolase family 55. J.Biol.Chem., 290, 2015
4KPE	Novel fluoroquinolones in complex with topoisomerase IV from S. pneumoniae and E-site G-gate 分子名称: (7aR,8R)-8-amino-4-cyclopropyl-12-fluoro-1-oxo-4,7,7a,8,9,10-hexahydro-1H-pyrrolo[1',2':1,7]azepino[2,3-h]quinoline-2-carboxylic acid, DNA topoisomerase 4 subunit A, DNA topoisomerase 4 subunit B, ... 著者 Laponogov, I, Pan, X.-S, Vesekov, D.A, Cirz, R.T, Wagman, A.S, Moser, H.E, Fisher, L.M, Sanderson, M.R. 登録日 2013-05-13 公開日 2014-11-26 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (3.43 Å) 主引用文献 Exploring the active site of the Streptococcus pneumoniae topoisomerase IV-DNA cleavage complex with novel 7,8-bridged fluoroquinolones. Open Biol, 6, 2016
5HR1	Crystal structure of thioredoxin L107A mutant 分子名称: COPPER (II) ION, Thioredoxin-1 著者 Noguera, M.E, Vazquez, D.S, Howard, E.I, Cousido-Siah, A, Mitschler, A, Podjarny, A, Santos, J. 登録日 2016-01-22 公開日 2017-02-22 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.144 Å) 主引用文献 Structural variability of E. coli thioredoxin captured in the crystal structures of single-point mutants. Sci Rep, 7, 2017
4KPF	Novel fluoroquinolones in complex with topoisomerase IV from S. pneumoniae and E-site G-gate 分子名称: (3aS,4R)-4-amino-13-cyclopropyl-8-fluoro-10-oxo-3a,4,5,6,10,13-hexahydro-1H,3H-pyrrolo[2',1':3,4][1,4]oxazepino[5,6-h]quinoline-11-carboxylic acid, E-site1, E-site2, ... 著者 Laponogov, I, Pan, X.-S, Vesekov, D.A, Cirz, R.T, Wagman, A.S, Moser, H.E, Fisher, L.M, Sanderson, M.R. 登録日 2013-05-13 公開日 2014-11-26 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (3.24 Å) 主引用文献 Exploring the active site of the Streptococcus pneumoniae topoisomerase IV-DNA cleavage complex with novel 7,8-bridged fluoroquinolones. Open Biol, 6, 2016
5HR2	Crystal structure of thioredoxin L94A mutant 分子名称: COPPER (II) ION, Thioredoxin 著者 Noguera, M.E, Vazquez, D.S, Howard, E.I, Cousido-Siah, A, Mitschler, A, Podjarny, A, Santos, J. 登録日 2016-01-22 公開日 2017-02-22 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structural variability of E. coli thioredoxin captured in the crystal structures of single-point mutants. Sci Rep, 7, 2017
3DNF	Structure of (E)-4-Hydroxy-3-methyl-but-2-enyl Diphosphate Reductase, the Terminal Enzyme of the Non-Mevalonate Pathway 分子名称: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER, GLYCEROL 著者 Rekittke, I. 登録日 2008-07-02 公開日 2008-12-30 最終更新日 2020-09-09 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structure of (E)-4-Hydroxy-3-methyl-but-2-enyl Diphosphate Reductase, the Terminal Enzyme of the Non-Mevalonate Pathway. J.Am.Chem.Soc., 2008
1SIG	CRYSTAL STRUCTURE OF A SIGMA70 SUBUNIT FRAGMENT FROM ESCHERICHIA COLI RNA POLYMERASE 分子名称: RNA POLYMERASE PRIMARY SIGMA FACTOR 著者 Malhotra, A, Severinova, E, Darst, S.A. 登録日 1997-02-18 公開日 1997-05-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase. Cell(Cambridge,Mass.), 87, 1996
4TZ1	Ensemble refinement of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminaritriose 分子名称: Putative secreted protein, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose 著者 Bianchetti, C.M, Takasuka, T.E, Yik, E.J, Bergeman, L.F, Fox, B.G. 登録日 2014-07-09 公開日 2015-03-18 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Active site and laminarin binding in glycoside hydrolase family 55. J.Biol.Chem., 290, 2015
4TZ5	Ensemble refinement of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminarihexaose 分子名称: 1,2-ETHANEDIOL, Putative secreted protein, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose, ... 著者 Bianchetti, C.M, Takasuka, T.E, Yik, E.J, Bergeman, L.F, Fox, B.G. 登録日 2014-07-09 公開日 2015-03-18 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Active site and laminarin binding in glycoside hydrolase family 55. J.Biol.Chem., 290, 2015
4UDT	T cell receptor (TRAV22,TRBV7-9) structure 分子名称: GLYCEROL, PROTEIN TRBV7-9, T-CELL RECEPTOR BETA-2 CHAIN C REGION, ... 著者 Rodstrom, K.E.J, Regenthal, P, Lindkvist-Petersson, K. 登録日 2014-12-11 公開日 2015-06-24 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structure of Staphylococcal Enterotoxin E in Complex with Tcr Defines the Role of Tcr Loop Positioning in Superantigen Recognition. Plos One, 10, 2015
4TXQ	Crystal structure of LIP5 N-terminal domain complexed with CHMP1B MIM 分子名称: Charged multivesicular body protein 1b, Vacuolar protein sorting-associated protein VTA1 homolog 著者 Vild, C.J, Xu, Z. 登録日 2014-07-04 公開日 2015-02-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 A Novel Mechanism of Regulating the ATPase VPS4 by Its Cofactor LIP5 and the Endosomal Sorting Complex Required for Transport (ESCRT)-III Protein CHMP5. J.Biol.Chem., 290, 2015
4TXP	Crystal structure of LIP5 N-terminal domain 分子名称: Vacuolar protein sorting-associated protein VTA1 homolog 著者 Vild, C.J, Xu, Z. 登録日 2014-07-04 公開日 2015-02-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 A Novel Mechanism of Regulating the ATPase VPS4 by Its Cofactor LIP5 and the Endosomal Sorting Complex Required for Transport (ESCRT)-III Protein CHMP5. J.Biol.Chem., 290, 2015
8HEK	Crystal Structure of Anti-CRISPR AcrIE2 分子名称: AcrIE2 著者 Koo, J, Ka, D, Bae, E. 登録日 2022-11-08 公開日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 Biochemical characterization of type I-E anti-CRISPR proteins, AcrIE2 and AcrIE4 Appl.Biol.Chem., 66, 2023
6NUP	Structure of thioredoxin (trxA) from Rickettsia prowazekii str. Madrid E. 分子名称: CITRIC ACID, Thioredoxin 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2019-02-01 公開日 2019-02-20 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of thioredoxin (trxA) from Rickettsia prowazekii str. Madrid E. to be published
6PNR	A GH31 family sulfoquinovosidase from E. rectale in complex with aza-sugar inhibitor IFGSQ 分子名称: Alpha-glucosidase, SULFATE ION, [(3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)piperidin-3-yl]methanesulfonic acid 著者 Jarva, M.A, Lingford, J.P, John, A, Goddard-Borger, E.D. 登録日 2019-07-03 公開日 2020-07-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A GH31 family sulfoquinovosidase from E. rectale in complex with aza-sugar inhibitor IFGSQ To Be Published

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