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8RAH
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BU of 8rah by Molmil
Crystal structure of class Ie ribonucleotide reductase R2 subunit with post-translational modification of Y150 into a DOPA from Gardnerella vaginalis
分子名称: ribonucleoside-diphosphate reductase
著者John, J, Hogbom, M.
登録日2023-12-01
公開日2024-12-11
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization of a second class Ie ribonucleotide reductase.
Commun Biol, 8, 2025
2FC3
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BU of 2fc3 by Molmil
Crystal structure of the extremely thermostable Aeropyrum pernix L7Ae multifunctional protein
分子名称: 50S ribosomal protein L7Ae
著者Brown II, B.A, Suryadi, J, Zhou, Z, Gupton Jr, T.B, Flowers, S.L.
登録日2005-12-11
公開日2006-11-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structure of the Aeropyrum pernix L7Ae multifunctional protein and insight into its extreme thermostability.
Acta Crystallogr.,Sect.F, 69, 2013
7Z2R
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BU of 7z2r by Molmil
Differences between the GluD1 and GluD2 receptors revealed by GluD1 X-ray crystallography, binding studies and molecular dynamics
分子名称: Glutamate receptor ionotropic, delta-1, SULFATE ION
著者Masternak, M, Laulumaa, S, Kastrup, J.S.
登録日2022-02-28
公開日2023-01-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.574 Å)
主引用文献Differences between the GluD1 and GluD2 receptors revealed by GluD1 X-ray crystallography, binding studies and molecular dynamics.
Febs J., 290, 2023
7ZF0
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BU of 7zf0 by Molmil
Crystal structure of UGT85B1 from Sorghum bicolor in complex with UDP and p-hydroxymandelonitrile
分子名称: (2S)-HYDROXY(4-HYDROXYPHENYL)ETHANENITRILE, 1,2-ETHANEDIOL, Cyanohydrin beta-glucosyltransferase, ...
著者Putkaradze, N, Fredslund, F, Welner, D.H.
登録日2022-03-31
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-guided engineering of key amino acids in UGT85B1 controlling substrate and stereo-specificity in aromatic cyanogenic glucoside biosynthesis.
Plant J., 111, 2022
7ZER
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BU of 7zer by Molmil
Crystal structure of UGT85B1 from Sorghum bicolor in complex with UDP
分子名称: 1,2-ETHANEDIOL, Cyanohydrin beta-glucosyltransferase, URIDINE-5'-DIPHOSPHATE
著者Putkaradze, N, Fredslund, F, Welner, D.H.
登録日2022-03-31
公開日2022-07-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structure-guided engineering of key amino acids in UGT85B1 controlling substrate and stereo-specificity in aromatic cyanogenic glucoside biosynthesis.
Plant J., 111, 2022
7ZA4
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BU of 7za4 by Molmil
GSTF sh155 mutant
分子名称: Glutathione transferase, SODIUM ION
著者Papageorgiou, A.C.
登録日2022-03-22
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Directed Evolution of Phi Class Glutathione Transferases Involved in Multiple-Herbicide Resistance of Grass Weeds and Crops.
Int J Mol Sci, 23, 2022
7Z6T
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BU of 7z6t by Molmil
Aspergillus clavatus M36 protease without the propeptide
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Extracellular metalloproteinase mep, ...
著者Wilkens, C, Qiu, J, Meyer, A.S, Morth, J.P.
登録日2022-03-14
公開日2023-03-22
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Aspergillus clavatus M36 protease without the propeptide
To Be Published
7ZOS
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BU of 7zos by Molmil
Class 1 Phytoglobin from Sugar beet (BvPgb1.2)
分子名称: CYANIDE ION, HEXACYANOFERRATE(3-), Non-symbiotic hemoglobin class 1, ...
著者Nyblom, M, Christensen, S, Eriksson, N, Bulow, L.
登録日2022-04-26
公開日2022-09-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Oxidative Implications of Substituting a Conserved Cysteine Residue in Sugar Beet Phytoglobin BvPgb 1.2.
Antioxidants, 11, 2022
7ZOI
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BU of 7zoi by Molmil
Carbohydrate binding domain CBM92-A from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588
分子名称: Glycoside hydrolase family 18
著者Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
登録日2022-04-25
公開日2023-05-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and biochemical analysis of family 92 carbohydrate-binding modules uncovers multivalent binding to beta-glucans.
Nat Commun, 15, 2024
7ZOO
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BU of 7zoo by Molmil
Carbohydrate binding domain CBM92-B from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588 in complex with gentiobiose
分子名称: Glycoside hydrolase family 18, beta-D-glucopyranose
著者Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
登録日2022-04-26
公開日2023-05-10
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural and biochemical analysis of family 92 carbohydrate-binding modules uncovers multivalent binding to beta-glucans.
Nat Commun, 15, 2024
7ZON
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BU of 7zon by Molmil
Carbohydrate binding domain CBM92-B from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588 in complex with glucose
分子名称: Glycoside hydrolase family 18, PENTAETHYLENE GLYCOL, beta-D-glucopyranose
著者Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
登録日2022-04-26
公開日2023-05-10
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural and biochemical analysis of family 92 carbohydrate-binding modules uncovers multivalent binding to beta-glucans.
Nat Commun, 15, 2024
7ZOH
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BU of 7zoh by Molmil
Carbohydrate binding domain CBM92-B from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588
分子名称: Glycoside hydrolase family 18
著者Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
登録日2022-04-25
公開日2023-05-10
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural and biochemical analysis of family 92 carbohydrate-binding modules uncovers multivalent binding to beta-glucans.
Nat Commun, 15, 2024
7ZOP
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BU of 7zop by Molmil
Carbohydrate binding domain CBM92-B from a multi-catalytic glucanase-chitinase from Chitinophaga pinensis DSM 2588 in complex with sophorose.
分子名称: Glycoside hydrolase family 18, beta-D-glucopyranose
著者Mazurkewich, S, McKee, L.S, Lu, Z, Branden, G, Larsbrink, J.
登録日2022-04-26
公開日2023-05-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural and biochemical analysis of family 92 carbohydrate-binding modules uncovers multivalent binding to beta-glucans.
Nat Commun, 15, 2024
7Z1U
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BU of 7z1u by Molmil
Biochemical implications of the substitution of a unique cysteine residue in sugar beet phytoglobin BvPgb 1.2
分子名称: Non-symbiotic hemoglobin class 1, PROTOPORPHYRIN IX CONTAINING FE
著者Nyblom, M, Christensen, S, Leiva Eriksson, N, Bulow, L.
登録日2022-02-25
公開日2022-09-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Oxidative Implications of Substituting a Conserved Cysteine Residue in Sugar Beet Phytoglobin BvPgb 1.2.
Antioxidants, 11, 2022
7Z3Y
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BU of 7z3y by Molmil
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH013545
分子名称: 2-[4-(3,5-dimethylpyrazol-1-yl)-2,6-bis(fluoranyl)phenyl]-~{N}-(4,5,6,7-tetrahydro-1,2-benzoxazol-3-yl)ethanamide, GLYCEROL, N-glycosylase/DNA lyase, ...
著者Scaletti, E.R, Stenmark, P.
登録日2022-03-02
公開日2023-03-22
最終更新日2025-03-05
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Virtual fragment screening for DNA repair inhibitors in vast chemical space.
Nat Commun, 16, 2025
1JU8
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BU of 1ju8 by Molmil
Solution structure of Leginsulin, a plant hormon
分子名称: Leginsulin
著者Yamazaki, T, Takaoka, M, Katoh, E, Hanada, K, Sakita, M, Sakata, K, Nishiuchi, Y, Hirano, H.
登録日2001-08-23
公開日2003-06-17
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献A possible physiological function and the tertiary structure of a 4-kDa peptide in legumes
EUR.J.BIOCHEM., 270, 2003
2HD5
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BU of 2hd5 by Molmil
USP2 in complex with ubiquitin
分子名称: Polyubiquitin, Ubiquitin carboxyl-terminal hydrolase 2, ZINC ION
著者Renatus, M, Kroemer, M.
登録日2006-06-20
公開日2006-08-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Basis of Ubiquitin Recognition by the Deubiquitinating Protease USP2.
Structure, 14, 2006
1OZ1
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BU of 1oz1 by Molmil
P38 MITOGEN-ACTIVATED KINASE IN COMPLEX WITH 4-AZAINDOLE INHIBITOR
分子名称: 3-(4-FLUOROPHENYL)-2-PYRIDIN-4-YL-1H-PYRROLO[3,2-B]PYRIDIN-1-OL, Mitogen-activated protein kinase 14
著者Lovejoy, B, Villasenor, A, Browner, M, Dunten, P.
登録日2003-04-07
公開日2003-09-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design and synthesis of 4-azaindoles as inhibitors of p38 MAP kinase.
J.Med.Chem., 46, 2003
7PQ2
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BU of 7pq2 by Molmil
Crystal Structure of the Ring Nuclease 0811 from Sulfolobus islandicus (Sis0811) in its apo form
分子名称: CRISPR-associated protein, APE2256 family, CRISPR Ring Nuclease
著者Molina, R, Jensen, A.L.G, Marchena-Hurtado, J, Lopez-Mendez, B, Stella, S, Montoya, G.
登録日2021-09-16
公開日2021-11-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structural basis of cyclic oligoadenylate degradation by ancillary Type III CRISPR-Cas ring nucleases.
Nucleic Acids Res., 49, 2021
7P6M
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BU of 7p6m by Molmil
Hydrogenated refolded hen egg-white lysozyme
分子名称: ACETATE ION, Lysozyme C, NITRATE ION
著者Ramos, J, Laux, V, Haertlein, M, Forsyth, V.T, Mossou, E, Larsen, S, Langkilde, A.E.
登録日2021-07-16
公開日2021-12-22
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献The impact of folding modes and deuteration on the atomic resolution structure of hen egg-white lysozyme.
Acta Crystallogr D Struct Biol, 77, 2021
8RJL
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BU of 8rjl by Molmil
Structure of a first order Sierpinski triangle formed by the H369R mutant of the citrate synthase from Synechococcus elongatus
分子名称: Citrate synthase
著者Lo, Y.K, Bohn, S, Sendker, F.L, Schuller, J.M, Hochberg, G.
登録日2023-12-21
公開日2024-02-28
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Emergence of fractal geometries in the evolution of a metabolic enzyme.
Nature, 628, 2024
8RJK
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BU of 8rjk by Molmil
Pseudoatomic model of a second-order Sierpinski triangle formed by the citrate synthase from Synechococcus elongatus
分子名称: Citrate synthase
著者Lo, Y.K, Bohn, S, Sendker, F.L, Schuller, J.M, Hochberg, G.
登録日2023-12-21
公開日2024-02-28
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (5.91 Å)
主引用文献Emergence of fractal geometries in the evolution of a metabolic enzyme.
Nature, 628, 2024
8S5N
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BU of 8s5n by Molmil
RNA polymerase II core initially transcribing complex with an ordered RNA of 12 nt
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ...
著者Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P.
登録日2024-02-24
公開日2024-04-10
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Three-step mechanism of promoter escape by RNA polymerase II.
Mol.Cell, 84, 2024
8S55
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BU of 8s55 by Molmil
RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state a (composite structure)
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ...
著者Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P.
登録日2024-02-22
公開日2024-04-17
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Three-step mechanism of promoter escape by RNA polymerase II.
Mol.Cell, 84, 2024
8RHZ
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BU of 8rhz by Molmil
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated conformation - symmetry expanded unneddylated dimer
分子名称: Cullin-9, E3 ubiquitin-protein ligase RBX1, ZINC ION
著者Hopf, L.V.M, Horn-Ghetko, D, Prabu, J.R, Schulman, B.A.
登録日2023-12-17
公開日2024-04-17
最終更新日2024-07-31
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Noncanonical assembly, neddylation and chimeric cullin-RING/RBR ubiquitylation by the 1.8 MDa CUL9 E3 ligase complex.
Nat.Struct.Mol.Biol., 31, 2024

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件を2025-07-09に公開中

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