PDB: 46188 件ウェブページステータス検索Chemie searchBIRD

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6WL5	Crystal structure of EcmrR C-terminal domain 分子名称: 1,2-ETHANEDIOL, CETYL-TRIMETHYL-AMMONIUM, CHLORIDE ION, ... 著者 Yang, Y, Liu, C, Liu, B. 登録日 2020-04-18 公開日 2021-04-07 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural visualization of transcription activated by a multidrug-sensing MerR family regulator. Nat Commun, 12, 2021
6WNM	The structure of Pf4r from a superinfective isolate of the filamentous phage Pf4 of Pseudomonas aeruginosa PA01 分子名称: Pf4r, [(2R)-3-{[2-(carboxymethoxy)benzene-1-carbonyl]amino}-2-methoxypropyl](hydroxy)mercury 著者 Michie, K.A, Norrian, P, Duggin, I.G, McDougald, D, Rice, S.A. 登録日 2020-04-22 公開日 2021-04-07 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.58 Å) 主引用文献 The Repressor C Protein, Pf4r, Controls Superinfection of Pseudomonas aeruginosa PAO1 by the Pf4 Filamentous Phage and Regulates Host Gene Expression. Viruses, 13, 2021
6WPZ	The structure of Pf4r from a superinfective isolate of the filamentous phage Pf4 of Pseudomonas aeruginosa PA01 分子名称: CHLORIDE ION, Pf4r 著者 Michie, K.A, Norrian, P, Duggin, I.G, McDougald, D, Rice, S.A. 登録日 2020-04-28 公開日 2021-04-07 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.993 Å) 主引用文献 The Repressor C Protein, Pf4r, Controls Superinfection of Pseudomonas aeruginosa PAO1 by the Pf4 Filamentous Phage and Regulates Host Gene Expression. Viruses, 13, 2021
5J10	De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity 分子名称: peptide design 2L4HC2_24 著者 Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G. 登録日 2016-03-28 公開日 2016-05-25 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity. Science, 352, 2016
4IAN	Crystal Structure of apo Human PRPF4B kinase domain 分子名称: SULFATE ION, Serine/threonine-protein kinase PRP4 homolog 著者 Mechin, I, Haas, K, Chen, X, Zhang, Y, McLean, L. 登録日 2012-12-06 公開日 2013-08-28 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Evaluation of Cancer Dependence and Druggability of PRP4 Kinase Using Cellular, Biochemical, and Structural Approaches. J.Biol.Chem., 288, 2013
2ILZ	Crystal structure of poliovirus polymerase complexed with GTP and Mn2+ 分子名称: ACETIC ACID, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ... 著者 Thompson, A.A, Peersen, O.B. 登録日 2006-10-03 公開日 2006-12-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions. J.Mol.Biol., 366, 2007
1H4Q	Prolyl-tRNA synthetase from Thermus thermophilus complexed with tRNApro(CGG), ATP and prolinol 分子名称: ADENOSINE-5'-TRIPHOSPHATE, PROLYL-TRNA SYNTHETASE, PYRROLIDINE-2-CARBALDEHYDE, ... 著者 Yaremchuk, A, Tukalo, M, Cusack, S. 登録日 2001-05-13 公開日 2001-06-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 A Succession of Substrate Induced Conformational Changes Ensures the Amino Acid Specificity of Thermus Thermophilus Prolyl-tRNA Synthetase: Comparison with Histidyl-tRNA Synthetase J.Mol.Biol., 309, 2001
1GOC	COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION 分子名称: RIBONUCLEASE H 著者 Ishikawa, K, Kimura, S, Nakamura, H, Morikawa, K, Kanaya, S. 登録日 1993-05-10 公開日 1994-01-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution. Biochemistry, 32, 1993
5J0J	De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity 分子名称: designed protein 2L6HC3_6 著者 Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G. 登録日 2016-03-28 公開日 2016-05-25 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.256 Å) 主引用文献 De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity. Science, 352, 2016
2ION	Crystal structure of the C-terminal MA3 domain of Pdcd4 (mouse); form2 分子名称: GLYCEROL, Programmed Cell Death 4, Pdcd4 著者 Wlodawer, A, LaRonde-LeBlanc, N.A. 登録日 2006-10-10 公開日 2006-11-14 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Structural basis for inhibition of translation by the tumor suppressor pdcd4. Mol.Cell.Biol., 27, 2007
5TBK	Crystal structure of human importin a3 bound to RCC1 分子名称: Importin subunit alpha-3, Regulator of chromosome condensation 著者 Sankhala, R.S, Lokareddy, R.K, Pumroy, R.A, Cingolani, G. 登録日 2016-09-12 公開日 2017-09-13 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Three-dimensional context rather than NLS amino acid sequence determines importin alpha subtype specificity for RCC1. Nat Commun, 8, 2017
5J4Y	The crystal structure of N-(4-(2-(thiazolo[5,4-c]pyridin-2-yl)phenoxy)phenyl)acetamide bound to JCV Helicase 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Large T antigen, N-{4-[2-([1,3]thiazolo[5,4-c]pyridin-2-yl)phenoxy]phenyl}acetamide, ... 著者 Ter Haar, E. 登録日 2016-04-01 公開日 2016-07-20 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Fragment-Based Discovery of Dual JC Virus and BK Virus Helicase Inhibitors. J.Med.Chem., 59, 2016
6BEB	Crystal structure of VACV D13 in complex with Rifamycin SV 分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Scaffold protein D13, ... 著者 Garriga, D, Accurso, C, Coulibaly, F. 登録日 2017-10-25 公開日 2018-07-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EM4	State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes 分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 60S ribosomal protein L13-A, ... 著者 Kater, L, Cheng, J, Barrio-Garcia, C, Hurt, E, Beckmann, R. 登録日 2017-10-01 公開日 2017-12-27 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes. Cell, 171, 2017
6BEH	Crystal structure of VACV D13 in complex with Rifapentine 分子名称: 1,2-ETHANEDIOL, FORMIC ACID, RIFAPENTINE, ... 著者 Garriga, D, Accurso, C, Coulibaly, F. 登録日 2017-10-25 公開日 2018-07-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2IM0	Crystal structure of poliovirus polymerase complexed with CTP and Mg2+ 分子名称: ACETIC ACID, CYTIDINE-5'-TRIPHOSPHATE, SODIUM ION, ... 著者 Thompson, A.A, Peersen, O.B. 登録日 2006-10-03 公開日 2006-12-12 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions. J.Mol.Biol., 366, 2007
4I15	Crystal structure of TbrPDEB1 分子名称: Class 1 phosphodiesterase PDEB1, MAGNESIUM ION, ZINC ION 著者 Wang, H, Ke, H. 登録日 2012-11-20 公開日 2013-03-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Discovery of Novel Trypanosoma brucei Phosphodiesterase B1 Inhibitors by Virtual Screening against the Unliganded TbrPDEB1 Crystal Structure. J.Med.Chem., 56, 2013
4I2W	Crystal structure of the myosin chaperone UNC-45 from C.elegans in complex with a Hsp70 peptide 分子名称: Heat shock 70 kDa protein A, Protein UNC-45 著者 Clausen, T, Gazda, L, Hellerschmied, D. 登録日 2012-11-23 公開日 2013-03-13 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 The myosin chaperone UNC-45 is organized in tandem modules to support myofilament formation in C. elegans. Cell(Cambridge,Mass.), 152, 2013
2E8C	Crystal structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5 分子名称: Hypothetical protein Aq_1549 著者 Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-01-19 公開日 2008-01-22 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5 To be Published
6BEF	Crystal structure of VACV D13 in complex with 3-formyl rifamycin SV 分子名称: (2S,12Z,14E,16S,17S,18R,19R,20R,21S,22R,23S,24E)-8-formyl-5,6,9,17,19-pentahydroxy-23-methoxy-2,4,12,16,18,20,22-heptam ethyl-1,11-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)naphtho[2,1-b]furan-21-yl acetate, 1,2-ETHANEDIOL, FORMIC ACID, ... 著者 Garriga, D, Accurso, C, Coulibaly, F. 登録日 2017-10-25 公開日 2018-07-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2IGB	Crystal Structure of PyrR, The Regulator Of The Pyrimidine Biosynthetic Operon In Bacillus caldolyticus, UMP-bound form 分子名称: 1,2-ETHANEDIOL, PyrR bifunctional protein, URIDINE-5'-MONOPHOSPHATE 著者 Chander, P, Switzer, R.L, Smith, J.L. 登録日 2006-09-22 公開日 2007-09-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 PyrR, the regulator of the pyrimidine biosynthetic operon in Bacillus caldolyticus To be Published
5J73	De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity 分子名称: protein design 2L4HC2_9 著者 Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Boyken, S, Chen, Z, Groves, B, Langan, R.A, Oberdorfer, G, Ford, A, Gilmore, J, Xu, C, DiMaio, F, Seelig, G. 登録日 2016-04-05 公開日 2016-05-25 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity. Science, 352, 2016
1GOA	COOPERATIVE STABILIZATION OF ESCHERICHIA COLI RIBONUCLEASE HI BY INSERTION OF GLY-80B AND GLY-77-> ALA SUBSTITUTION 分子名称: RIBONUCLEASE H 著者 Ishikawa, K, Kimura, S, Nakamura, H, Morikawa, K, Kanaya, S. 登録日 1993-05-10 公開日 1994-01-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Cooperative stabilization of Escherichia coli ribonuclease HI by insertion of Gly-80b and Gly-77-->Ala substitution. Biochemistry, 32, 1993
6O9R	The capsid structure of empty AAVrh.10 particles 分子名称: Capsid protein VP1 著者 Mietzsch, M, Agbandje-McKenna, M. 登録日 2019-03-14 公開日 2019-12-11 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (2.75 Å) 主引用文献 Comparative Analysis of the Capsid Structures of AAVrh.10, AAVrh.39, and AAV8. J.Virol., 94, 2020
2ILY	Crystal structure of poliovirus polymerase complexed with ATP and Mg2+ 分子名称: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Poliovirus polymerase, ... 著者 Thompson, A.A, Peersen, O.B. 登録日 2006-10-03 公開日 2006-12-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions. J.Mol.Biol., 366, 2007

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