Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2ZCK
DownloadVisualize
BU of 2zck by Molmil
Crystal structure of a ternary complex between PSA, a substrat-acyl intermediate and an activating antibody
分子名称: KGISSQY, Prostate-specific antigen, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Menez, R, Stura, E, Jolivet-Reynaud, C.
登録日2007-11-09
公開日2008-01-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure of a ternary complex between human prostate-specific antigen, its substrate acyl intermediate and an activating antibody
J.Mol.Biol., 376, 2008
2ZL3
DownloadVisualize
BU of 2zl3 by Molmil
Crystal structure of H.pylori ClpP S99A
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Kim, D.Y, Kim, K.K.
登録日2008-04-02
公開日2008-04-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献The structural basis for the activation and peptide recognition of bacterial ClpP
J.Mol.Biol., 379, 2008
7KLR
DownloadVisualize
BU of 7klr by Molmil
Solution structure of the PHD1 domain of histone demethylase KDM5A in complex with a histone H3(1-10) peptide
分子名称: Histone H3.1, Lysine-specific demethylase 5A, ZINC ION
著者Longbotham, E.J, Kelly, M.J.S, Fujimori, D.G.
登録日2020-10-31
公開日2021-03-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Recognition of Histone H3 Methylation States by the PHD1 Domain of Histone Demethylase KDM5A.
Acs Chem.Biol., 2021
7JGP
DownloadVisualize
BU of 7jgp by Molmil
Crystal Structure of the Ni-bound Human Heavy-chain variant 122H-delta C-star with 2,5-furandihyrdoxamate at 318K
分子名称: Ferritin heavy chain, NICKEL (II) ION, SODIUM ION
著者Bailey, J.B, Tezcan, F.A.
登録日2020-07-19
公開日2020-10-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (6.42 Å)
主引用文献Tunable and Cooperative Thermomechanical Properties of Protein-Metal-Organic Frameworks.
J.Am.Chem.Soc., 142, 2020
7JHE
DownloadVisualize
BU of 7jhe by Molmil
Room Temperature Structure of SARS-CoV-2 Nsp10/Nsp16 Methyltransferase in a Complex with 2'-O-methylated m7GpppA Cap-1 and SAH Determined by Fixed-Target Serial Crystallography
分子名称: 2'-O-methyltransferase, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-(2'-O-METHYL)-ADENOSINE, ...
著者Wilamowski, M, Sherrell, D.A, Minasov, G, Kim, Y, Shuvalova, L, Lavens, A, Chard, R, Rosas-Lemus, M, Maltseva, N, Jedrzejczak, R, Michalska, K, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-07-20
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献2'-O methylation of RNA cap in SARS-CoV-2 captured by serial crystallography.
Proc.Natl.Acad.Sci.USA, 118, 2021
3KJH
DownloadVisualize
BU of 3kjh by Molmil
Zn-bound state of CooC1
分子名称: CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC, ZINC ION
著者Jeoung, J.-H, Dobbek, H.
登録日2009-11-03
公開日2010-01-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the ATP-Dependent Maturation Factor of Ni,Fe-Containing Carbon Monoxide Dehydrogenases
J.Mol.Biol., 396, 2010
7KEN
DownloadVisualize
BU of 7ken by Molmil
Protein Tyrosine Phosphatase 1B, D289A mutant, apo state
分子名称: Tyrosine-protein phosphatase non-receptor type 1
著者Fox, J.M, Hongdusit, A.
登録日2020-10-11
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Optogenetic Analysis of Allosteric Control in Protein Tyrosine Phosphatases.
Biochemistry, 60, 2021
2JI4
DownloadVisualize
BU of 2ji4 by Molmil
Human phosphoribosylpyrophosphate synthetase - associated protein 41 (PAP41)
分子名称: CHLORIDE ION, PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE-ASSOCIATED PROTEIN 2
著者Moche, M, Lehtio, L, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg-Schiavone, L, Johansson, I, Karlberg, T, Kotenyova, T, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Nordlund, P.
登録日2007-02-26
公開日2007-03-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Human Phosphoribosylpyrophosphate Synthetase -Associated Protein 41 (Pap41)
To be Published
7DO5
DownloadVisualize
BU of 7do5 by Molmil
Crystal structure of Azotobacter vinelandii L-rhamnose 1-dehydrogenase(apo-form)
分子名称: SULFATE ION, Short-chain dehydrogenase/reductase SDR
著者Yoshiwara, K, Watanabe, Y, Watanabe, S.
登録日2020-12-12
公開日2021-02-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.836 Å)
主引用文献Crystal structure of l-rhamnose 1-dehydrogenase involved in the nonphosphorylative pathway of l-rhamnose metabolism in bacteria.
Febs Lett., 595, 2021
7KZP
DownloadVisualize
BU of 7kzp by Molmil
Structure of the human Fanconi anaemia Core complex
分子名称: E3 ubiquitin-protein ligase FANCL, Fanconi anemia core complex-associated protein 100, Fanconi anemia core complex-associated protein 20, ...
著者Wang, S.L, Pavletich, N.P.
登録日2020-12-10
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the FA core ubiquitin ligase closing the ID clamp on DNA.
Nat.Struct.Mol.Biol., 28, 2021
2ZO3
DownloadVisualize
BU of 2zo3 by Molmil
Bisphenylic Thrombin Inhibitors
分子名称: Hirudin variant-1, SODIUM ION, Thrombin heavy chain, ...
著者Baum, B, Heine, A, Klebe, G.
登録日2008-05-05
公開日2009-04-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Think twice: understanding the high potency of bis(phenyl)methane inhibitors of thrombin
J.Mol.Biol., 391, 2009
7L11
DownloadVisualize
BU of 7l11 by Molmil
CRYSTAL STRUCTURE OF THE SARS-COV-2(2019-NCOV) MAIN PROTEASE IN COMPLEX WITH COMPOUND 5
分子名称: 2-[3-(3-chloro-5-propoxyphenyl)-2-oxo[2H-[1,3'-bipyridine]]-5-yl]benzonitrile, 3C-like proteinase
著者Deshmukh, M.G, Ippolito, J.A, Stone, E.A, Jorgensen, W.L, Anderson, K.S.
登録日2020-12-14
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Potent Noncovalent Inhibitors of the Main Protease of SARS-CoV-2 from Molecular Sculpting of the Drug Perampanel Guided by Free Energy Perturbation Calculations.
Acs Cent.Sci., 7, 2021
7KJ0
DownloadVisualize
BU of 7kj0 by Molmil
hyperoxidized human peroxiredoxin 2
分子名称: Peroxiredoxin-2
著者Kean, K.M, Karplus, P.A.
登録日2020-10-25
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Modifying the resolving cysteine affects the structure and hydrogen peroxide reactivity of peroxiredoxin 2.
J.Biol.Chem., 296, 2021
2ZP9
DownloadVisualize
BU of 2zp9 by Molmil
The Nature of the TRAP:Anti-TRAP complex
分子名称: TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ...
著者Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H.
登録日2008-07-08
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The nature of the TRAP-Anti-TRAP complex.
Proc.Natl.Acad.Sci.USA, 106, 2009
7CYU
DownloadVisualize
BU of 7cyu by Molmil
Crystal structure of human BAF57 HMG domain
分子名称: SULFATE ION, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
著者Heo, Y, Yun, J.H, Park, J.H, Lee, W.
登録日2020-09-04
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of the HMG domain of human BAF57 and its interaction with four-way junction DNA.
Biochem.Biophys.Res.Commun., 533, 2020
2ZFR
DownloadVisualize
BU of 2zfr by Molmil
Exploring thrombin S3 pocket
分子名称: (S)-N-(4-carbamimidoylbenzyl)-1-(2-(cyclohexyloxy)ethanoyl)pyrrolidine-2-carboxamide, GLYCEROL, Hirudin, ...
著者Brandt, T, Baum, B, Heine, A, Klebe, G.
登録日2008-01-10
公開日2009-01-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Exploring thrombin S3 pocket
To be Published
7L30
DownloadVisualize
BU of 7l30 by Molmil
Binjari virus (BinJV)
分子名称: Envelope protein E, prM protein
著者Hardy, J.M, Venugopal, H.V, Newton, N.D, Watterson, D, Coulibaly, F.J.
登録日2020-12-17
公開日2021-03-10
最終更新日2021-05-26
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献The structure of an infectious immature flavivirus redefines viral architecture and maturation.
Sci Adv, 7, 2021
7DSF
DownloadVisualize
BU of 7dsf by Molmil
The Crystal Structure of human SPR from Biortus.
分子名称: ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Sepiapterin reductase, ...
著者Wang, F, Lv, Z, Cheng, W, Lin, D, Meng, Q, Zhang, B, Huang, Y.
登録日2020-12-31
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crystal Structure of human SPR from Biortus.
To Be Published
2ZG9
DownloadVisualize
BU of 2zg9 by Molmil
Crystal Structure of Pd(allyl)/apo-H114AFr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
著者Abe, S, Niemeyer, J, Abe, M, Ueno, T, Hikage, T, Erker, G, Watanabe, Y.
登録日2008-01-18
公開日2008-08-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage.
J.Am.Chem.Soc., 130, 2008
3KHB
DownloadVisualize
BU of 3khb by Molmil
Crystal structure of Escherichia coli AlkB with Co(II) and 2-OG
分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase alkB, COBALT (II) ION
著者Hollis, T, Holland, P.J.
登録日2009-10-30
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and mutational analysis of Escherichia coli AlkB provides insight into substrate specificity and DNA damage searching.
Plos One, 5, 2010
7KIZ
DownloadVisualize
BU of 7kiz by Molmil
reduced human peroxiredoxin 2
分子名称: Peroxiredoxin-2
著者Kean, K.M, Karplus, P.A.
登録日2020-10-25
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Modifying the resolving cysteine affects the structure and hydrogen peroxide reactivity of peroxiredoxin 2.
J.Biol.Chem., 296, 2021
3KES
DownloadVisualize
BU of 3kes by Molmil
Crystal structure of the autoproteolytic domain from the nuclear pore complex component NUP145 from Saccharomyces cerevisiae in the Hexagonal, P61 space group
分子名称: 1,2-ETHANEDIOL, Nucleoporin NUP145
著者Sampathkumar, P, Ozyurt, S.A, Do, J, Bain, K, Dickey, M, Gheyi, T, Sali, A, Kim, S.J, Phillips, J, Pieper, U, Fernandez-Martinez, J, Franke, J.D, Atwell, S, Thompson, D.A, Emtage, J.S, Wasserman, S, Rout, M, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-10-26
公開日2009-12-22
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of the autoproteolytic domain from the Saccharomyces cerevisiae nuclear pore complex component, Nup145.
Proteins, 78, 2010
7D43
DownloadVisualize
BU of 7d43 by Molmil
eIF2B-eIF2(aP), aPg complex
分子名称: Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 2, Eukaryotic translation initiation factor 2 subunit 3, ...
著者Kashiwagi, K, Ito, T.
登録日2020-09-22
公開日2020-12-09
最終更新日2021-01-27
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献ISRIB Blunts the Integrated Stress Response by Allosterically Antagonising the Inhibitory Effect of Phosphorylated eIF2 on eIF2B.
Mol.Cell, 81, 2021
7KPL
DownloadVisualize
BU of 7kpl by Molmil
Crystal structure of hEphB1 in apo form
分子名称: Ephrin type-B receptor 1
著者Ahmed, M, Wang, P, Sadek, H.
登録日2020-11-11
公開日2021-03-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.705 Å)
主引用文献Identification of tetracycline combinations as EphB1 tyrosine kinase inhibitors for treatment of neuropathic pain.
Proc.Natl.Acad.Sci.USA, 118, 2021
7KOX
DownloadVisualize
BU of 7kox by Molmil
Alpha-7 nicotinic acetylcholine receptor bound to epibatidine and PNU-120596 in the activated state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Noviello, C.M, Hibbs, R.E, Gharpure, A, Mukhtasimova, N, Baxter, L, Cabuco, R, Borek, D, Sine, S.
登録日2020-11-10
公開日2021-03-17
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structure and gating mechanism of the alpha 7 nicotinic acetylcholine receptor.
Cell, 184, 2021

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon