Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7LGW
DownloadVisualize
BU of 7lgw by Molmil
Structure of human Prestin in nanodisc in the presence of NaCl
分子名称: CHLORIDE ION, CHOLESTEROL, DECANE, ...
著者Ge, J, Gouaux, E.
登録日2021-01-21
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Molecular mechanism of prestin electromotive signal amplification.
Cell, 184, 2021
7C89
DownloadVisualize
BU of 7c89 by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) C50S/F80C/C207S/C213S mutant modified with 2-bromoacetophenone(Ph@ApPrx*)
分子名称: 2-bromanyl-1-phenyl-ethanone, CITRATE ANION, Peroxiredoxin
著者Himiyama, T, Nakamura, T.
登録日2020-05-29
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Rebuilding Ring-Type Assembly of Peroxiredoxin by Chemical Modification.
Bioconjug.Chem., 32, 2021
7DU5
DownloadVisualize
BU of 7du5 by Molmil
The structure of the M.tb MazF-mt1 toxin in complex with a fragment of cognate antitoxin
分子名称: A fragment of MazE-mt1, Endoribonuclease MazF9
著者Xie, W, Chen, R.
登録日2021-01-08
公開日2022-01-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Mechanistic Insight into the Peptide Binding Modes to Two M. tb MazF Toxins.
Toxins, 13, 2021
3J8Y
DownloadVisualize
BU of 3j8y by Molmil
High-resolution structure of ATP analog-bound kinesin on microtubules
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Shang, Z, Zhou, K, Xu, C, Csencsits, R, Cochran, J.C, Sindelar, C.V.
登録日2014-11-20
公開日2014-12-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献High-resolution structures of kinesin on microtubules provide a basis for nucleotide-gated force-generation.
Elife, 3, 2014
3B9Y
DownloadVisualize
BU of 3b9y by Molmil
Crystal structure of the Nitrosomonas europaea Rh protein
分子名称: Ammonium transporter family Rh-like protein, UNKNOWN LIGAND, octyl beta-D-glucopyranoside
著者Li, X, Jayachandran, S, Nguyen, H.-H.T, Chan, M.K.
登録日2007-11-07
公開日2007-12-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of the Nitrosomonas europaea Rh protein.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7C3D
DownloadVisualize
BU of 7c3d by Molmil
Crystal structure of AofleA from Arthrobotrys oligospora in complex with D-arabinose
分子名称: AofleA, GLYCEROL, alpha-D-arabinopyranose, ...
著者Liu, M, Cheng, X, Wang, J, Zhang, M, Wang, M.
登録日2020-05-12
公開日2020-07-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.596 Å)
主引用文献Structural insights into the fungi-nematodes interaction mediated by fucose-specific lectin AofleA from Arthrobotrys oligospora.
Int.J.Biol.Macromol., 164, 2020
5LPO
DownloadVisualize
BU of 5lpo by Molmil
tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-(methylamino)-4-(2-((2R,3R,4R,5R)-3,4,5-trimethoxytetrahydrofuran-2-yl)ethyl)-1H-imidazo[4,5-g]quinazolin-8(7H)-one
分子名称: 1,2-ETHANEDIOL, 6-amino-2-(methylamino)-4-(2-((2R,3R,4R,5R)-3,4,5-trimethoxytetrahydrofuran-2-yl)ethyl)-1H-imidazo[4,5-g]quinazolin-8(7H)-one, GLYCEROL, ...
著者Ehrmann, F.R, Heine, A, Klebe, G.
登録日2016-08-14
公開日2017-08-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Carbohydrate-based Inhibitors targeting the Ribose-34 pocket of Z.mobilis TGT and changing the oligomeric state of the homodimer
To be published
3J97
DownloadVisualize
BU of 3j97 by Molmil
Structure of 20S supercomplex determined by single particle cryoelectron microscopy (State II)
分子名称: Alpha-soluble NSF attachment protein, Synaptosomal-associated protein 25, Syntaxin-1A, ...
著者Zhao, M, Wu, S, Cheng, Y, Brunger, A.T.
登録日2014-12-05
公開日2015-01-28
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Mechanistic insights into the recycling machine of the SNARE complex.
Nature, 518, 2015
3J9P
DownloadVisualize
BU of 3j9p by Molmil
Structure of the TRPA1 ion channel determined by electron cryo-microscopy
分子名称: Maltose-binding periplasmic protein, Transient receptor potential cation channel subfamily A member 1 chimera
著者Paulsen, C.E, Armache, J.-P, Gao, Y, Cheng, Y, Julius, D.
登録日2015-02-14
公開日2015-04-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.24 Å)
主引用文献Structure of the TRPA1 ion channel suggests regulatory mechanisms.
Nature, 520, 2015
3JBH
DownloadVisualize
BU of 3jbh by Molmil
TWO HEAVY MEROMYOSIN INTERACTING-HEADS MOTIFS FLEXIBLE DOCKED INTO TARANTULA THICK FILAMENT 3D-MAP ALLOWS IN DEPTH STUDY OF INTRA- AND INTERMOLECULAR INTERACTIONS
分子名称: MYOSIN 2 ESSENTIAL LIGHT CHAIN STRIATED MUSCLE, MYOSIN 2 HEAVY CHAIN STRIATED MUSCLE, MYOSIN 2 REGULATORY LIGHT CHAIN STRIATED MUSCLE
著者Alamo, L, Qi, D, Wriggers, W, Pinto, A, Zhu, J, Bilbao, A, Gillilan, R.E, Hu, S, Padron, R.
登録日2015-09-01
公開日2016-03-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Conserved Intramolecular Interactions Maintain Myosin Interacting-Heads Motifs Explaining Tarantula Muscle Super-Relaxed State Structural Basis.
J. Mol. Biol., 428, 2016
3HS7
DownloadVisualize
BU of 3hs7 by Molmil
X-ray crystal structure of docosahexaenoic acid bound to the cyclooxygenase channel of cyclooxygenase-2
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Vecchio, A.J, Simmons, D.M, Malkowski, M.G.
登録日2009-06-10
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural basis of fatty acid substrate binding to cyclooxygenase-2.
J.Biol.Chem., 285, 2010
7C7E
DownloadVisualize
BU of 7c7e by Molmil
Crystal structure of C terminal domain of Escherichia coli DgoR
分子名称: Putative DNA-binding transcriptional regulator, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Lin, W.
登録日2020-05-25
公開日2021-01-20
実験手法X-RAY DIFFRACTION (2.047 Å)
主引用文献Structural and Functional Analyses of the Transcription Repressor DgoR From Escherichia coli Reveal a Divalent Metal-Containing D-Galactonate Binding Pocket.
Front Microbiol, 11, 2020
3HQV
DownloadVisualize
BU of 3hqv by Molmil
Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, rigid body refinement
分子名称: Collagen alpha-1(I) chain, Collagen alpha-2(I) chain
著者Orgel, J.P.
登録日2009-06-08
公開日2009-07-14
最終更新日2024-02-21
実験手法FIBER DIFFRACTION (5.16 Å)
主引用文献Microfibrillar Structure of Type I Collagen in Situ
Proc.Natl.Acad.Sci.USA, 103, 2006
7LH3
DownloadVisualize
BU of 7lh3 by Molmil
Structure of human prestin in the presence of sodium sulfate
分子名称: Prestin
著者Ge, J, Gouaux, E.
登録日2021-01-21
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Molecular mechanism of prestin electromotive signal amplification.
Cell, 184, 2021
2OMW
DownloadVisualize
BU of 2omw by Molmil
Crystal structure of InlA S192N Y369S/mEC1 complex
分子名称: CHLORIDE ION, Epithelial-cadherin, Internalin-A
著者Wollert, T, Heinz, D.W, Schubert, W.D.
登録日2007-01-23
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Extending the host range of Listeria monocytogenes by rational protein design.
Cell(Cambridge,Mass.), 129, 2007
7LMF
DownloadVisualize
BU of 7lmf by Molmil
SARS-CoV-2 3CLPro in complex with 2-(benzotriazol-1-yl)-N-[4-(1H-imidazol-4-yl)phenyl]-N-(3-thienylmethyl)acetamide
分子名称: 2-(benzotriazol-1-yl)-~{N}-[4-(1~{H}-imidazol-4-yl)phenyl]-~{N}-(thiophen-3-ylmethyl)ethanamide, 3C-like proteinase
著者Goins, C.M, Arya, T, Macdonald, J.D, Stauffer, S.R.
登録日2021-02-05
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-Based Optimization of ML300-Derived, Noncovalent Inhibitors Targeting the Severe Acute Respiratory Syndrome Coronavirus 3CL Protease (SARS-CoV-2 3CL pro ).
J.Med.Chem., 65, 2022
7CFS
DownloadVisualize
BU of 7cfs by Molmil
Cryo-EM strucutre of human acid-sensing ion channel 1a at pH 8.0
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acid-sensing ion channel 1, CHOLESTEROL HEMISUCCINATE, ...
著者Sun, D.M, Liu, S.L, Li, S.Y, Yang, F, Tian, C.L.
登録日2020-06-28
公開日2020-10-21
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structural insights into human acid-sensing ion channel 1a inhibition by snake toxin mambalgin1.
Elife, 9, 2020
2FZA
DownloadVisualize
BU of 2fza by Molmil
Crystal structure of d(GCGGGAGC): the base-intercalated duplex
分子名称: 5'-D(*GP*(CBR)P*GP*GP*GP*AP*GP*C)-3', CALCIUM ION, SODIUM ION
著者Kondo, J, Ciengshin, T, Juan, E.C.M, Mitomi, K, Takenaka, A.
登録日2006-02-09
公開日2007-01-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Crystal structure of d(gcGXGAgc) with X=G: a mutation at X is possible to occur in a base-intercalated duplex for multiplex formation
Nucleosides Nucleotides Nucleic Acids, 25, 2006
3B8E
DownloadVisualize
BU of 3b8e by Molmil
Crystal structure of the sodium-potassium pump
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, MAGNESIUM ION, Na+/K+ ATPase gamma subunit transcript variant a, ...
著者Morth, J.P, Pedersen, P.B, Toustrup-Jensen, M.S, Soerensen, T.L.M, Petersen, J, Andersen, J.P, Vilsen, B, Nissen, P.
登録日2007-11-01
公開日2007-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of the sodium-potassium pump.
Nature, 450, 2007
7LH2
DownloadVisualize
BU of 7lh2 by Molmil
Structure of human prestin in the presence of sodium salicylate and sodium sulfate
分子名称: 2-HYDROXYBENZOIC ACID, CHOLESTEROL, Prestin
著者Ge, J, Gouaux, E.
登録日2021-01-21
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献Molecular mechanism of prestin electromotive signal amplification.
Cell, 184, 2021
7DW0
DownloadVisualize
BU of 7dw0 by Molmil
SARS-CoV-2 Mpro mutant (H41A) in complex with nsp14|15 peptidyl substrate
分子名称: 3C-like proteinase, nsp14/15 peptidyl substrate
著者Liu, X, Zhao, Y, Yang, H, Rao, Z.
登録日2021-01-15
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7DW6
DownloadVisualize
BU of 7dw6 by Molmil
SARS-CoV-2 Mpro mutant (H41A) in complex with nsp15|16 peptidyl substrate
分子名称: 3C-like proteinase, nsp15/16 peptidyl substrate
著者Liu, X, Zhao, Y, Yang, H, Rao, Z.
登録日2021-01-15
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
3BEQ
DownloadVisualize
BU of 3beq by Molmil
Neuraminidase of A/Brevig Mission/1/1918 H1N1 strain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
著者Xu, X, Zhu, X, Wilson, I.A.
登録日2007-11-19
公開日2008-09-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural characterization of the 1918 influenza virus H1N1 neuraminidase
J.Virol., 82, 2008
2OLJ
DownloadVisualize
BU of 2olj by Molmil
ABC Protein ArtP in complex with ADP/Mg2+
分子名称: ADENOSINE-5'-DIPHOSPHATE, Amino acid ABC transporter, GLYCEROL, ...
著者Thaben, P.F, Eckey, V, Scheffel, F, Saenger, W, Schneider, E, Vahedi-Faridi, A.
登録日2007-01-19
公開日2008-01-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of the ATP-binding cassette (ABC) protein ArtP from Geobacillus stearothermophilus reveal a stable dimer in the post hydrolysis state and an asymmetry in the dimerization region
To be Published
5M28
DownloadVisualize
BU of 5m28 by Molmil
Maltodextrin binding protein MalE1 from L. casei BL23 bound to maltotriose
分子名称: CHLORIDE ION, MalE1, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Homburg, C, Bommer, M, Wuttge, S, Hobe, C, Beck, S, Dobbek, H, Deutscher, J, Licht, A, Schneider, E.
登録日2016-10-12
公開日2017-07-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.079 Å)
主引用文献Inducer exclusion in Firmicutes: insights into the regulation of a carbohydrate ATP binding cassette transporter from Lactobacillus casei BL23 by the signal transducing protein P-Ser46-HPr.
Mol. Microbiol., 105, 2017

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon