Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4G3R
DownloadVisualize
BU of 4g3r by Molmil
Crystal Structure of Nitrosyl Cytochrome P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, NITRIC OXIDE, ...
著者Madrona, Y, Tripathi, S.M, Li, H, Poulos, T.L.
登録日2012-07-15
公開日2012-08-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of substrate-free and nitrosyl cytochrome p450cin: implications for o(2) activation.
Biochemistry, 51, 2012
1MUU
DownloadVisualize
BU of 1muu by Molmil
2.0 A crystal structure of GDP-mannose dehydrogenase
分子名称: GDP-mannose 6-dehydrogenase, GUANOSINE 5'-(TRIHYDROGEN DIPHOSPHATE), P'-D-MANNOPYRANOSYL ESTER, ...
著者Snook, C.F, Tipton, P.A, Beamer, L.J.
登録日2002-09-24
公開日2003-05-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal structure of GDP-mannose dehydrogenase: A key enzyme of alginate biosynthesis in P. aeruginosa
Biochemistry, 42, 2003
3VIO
DownloadVisualize
BU of 3vio by Molmil
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
分子名称: 3-{4-[2-(beta-D-glucopyranosyloxy)ethyl]piperazin-1-yl}propane-1-sulfonic acid, Beta-glucosidase, CHLORIDE ION, ...
著者Jeng, W.Y, Liu, C.I, Wang, A.H.J.
登録日2011-10-03
公開日2012-07-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
5OUE
DownloadVisualize
BU of 5oue by Molmil
The crystal structure of CK2alpha in complex with compound 20
分子名称: (3-chloranyl-4-phenyl-phenyl)methyl-[2-(1~{H}-imidazol-4-yl)ethyl]azanium, 3-methyl-5-oxidanyl-benzoic acid, ACETATE ION, ...
著者Brear, P, De Fusco, C, Iegre, J, Yoshida, M, Mitchell, S, Rossmann, M, Carro, L, Sore, H, Hyvonen, M, Spring, D.
登録日2017-08-23
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Second-generation CK2 alpha inhibitors targeting the alpha D pocket.
Chem Sci, 9, 2018
1WIY
DownloadVisualize
BU of 1wiy by Molmil
Crystal Structure Analysis of a 6-coordinated Cytochorome P450 from Thermus thermophilus HB8
分子名称: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Kousumi, Y, Nakagawa, N, Kaneko, M, Yamamoto, H, Masui, R, Kuramitsu, S, Ueyama, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure Analysis of Cytochrome P450 from Thermus thermophilus HB8
To be Published
3VK8
DownloadVisualize
BU of 3vk8 by Molmil
Crystal structure of DNA-glycosylase bound to DNA containing Thymine glycol
分子名称: DNA (5'-D(*CP*GP*TP*CP*CP*AP*(CTG)P*GP*TP*CP*TP*AP*C)-3'), DNA (5'-D(*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*G)-3'), GLYCEROL, ...
著者Imamura, K, Averill, A, Wallace, S.S, Doublie, S.
登録日2011-11-10
公開日2011-12-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural characterization of viral ortholog of human DNA glycosylase NEIL1 bound to thymine glycol or 5-hydroxyuracil-containing DNA
J.Biol.Chem., 287, 2012
3VKK
DownloadVisualize
BU of 3vkk by Molmil
Crystal Structure Of The Covalent Intermediate Of Human Cytosolic Beta-Glucosidase-mannose complex
分子名称: CHLORIDE ION, Cytosolic beta-glucosidase, GLYCEROL, ...
著者Noguchi, J, Hayashi, Y, Okino, N, Ito, M, Kimura, M, Kakuta, Y.
登録日2011-11-17
公開日2012-11-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for inhibition mechanism of human cytosolic beta-glucosidase by monnoside
To be Published
1WC2
DownloadVisualize
BU of 1wc2 by Molmil
Beta-1,4-D-endoglucanase Cel45A from blue mussel Mytilus edulis at 1.2A
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, ENDOGLUCANASE
著者Jakobsson, E, Mahdi, S, Kleywegt, G.J, Stahlberg, J.
登録日2004-11-08
公開日2006-05-24
最終更新日2021-12-29
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Glucomannan and beta-glucan degradation by Mytilus edulis Cel45A: Crystal structure and activity comparison with GH45 subfamily A, B and C.
Carbohydr Polym, 277, 2022
2Y8P
DownloadVisualize
BU of 2y8p by Molmil
Crystal Structure of an Outer Membrane-Anchored Endolytic Peptidoglycan Lytic Transglycosylase (MltE) from Escherichia coli
分子名称: ENDO-TYPE MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE A
著者Artola-Recolons, C, Carrasco-Lopez, C, Llarrull, L.I, Kumarasiri, M, Lastochkin, E, Martinez-Ilarduya, I, Meindl, K, Uson, I, Mobashery, S, Hermoso, J.A.
登録日2011-02-08
公開日2011-04-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献High-Resolution Crystal Structure of Mlte, an Outer Membrane-Anchored Endolytic Peptidoglycan Lytic Transglycosylase from Escherichia Coli.
Biochemistry, 50, 2011
5OTP
DownloadVisualize
BU of 5otp by Molmil
The crystal structure of CK2alpha in complex with an analogue of compound 22
分子名称: 2-[5,6-bis(chloranyl)-1~{H}-benzimidazol-2-yl]-~{N}-[[3-chloranyl-4-(2-ethylphenyl)phenyl]methyl]ethanamine, ACETATE ION, Casein kinase II subunit alpha, ...
著者Brear, P, De Fusco, C, Iegre, J, Yoshida, M, Mitchell, S, Rossmann, M, Carro, L, Sore, H, Hyvonen, M, Spring, D.
登録日2017-08-22
公開日2018-09-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Second-generation CK2 alpha inhibitors targeting the alpha D pocket.
Chem Sci, 9, 2018
2Y8V
DownloadVisualize
BU of 2y8v by Molmil
Structure of chitinase, ChiC, from Aspergillus fumigatus.
分子名称: CLASS III CHITINASE, PUTATIVE, SODIUM ION
著者Rush, C.L, Schuettelkopf, A.W, Gay, L.M, van Aalten, D.M.F.
登録日2011-02-10
公開日2012-02-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure of Chitinase, Chic, from Aspergillus Fumigatus.
To be Published
3VNI
DownloadVisualize
BU of 3vni by Molmil
Crystal structures of D-Psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars
分子名称: MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
著者Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
登録日2012-01-16
公開日2012-08-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
4B2I
DownloadVisualize
BU of 4b2i by Molmil
Humanised monomeric RadA in complex with indazole
分子名称: 1H-indazole, DNA REPAIR AND RECOMBINATION PROTEIN RADA, PHOSPHATE ION
著者Scott, D.E, Ehebauer, M.T, Pukala, T, Marsh, M, Blundell, T.L, Venkitaraman, A.R, Abell, C, Hyvonen, M.
登録日2012-07-16
公開日2013-02-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Using a Fragment-Based Approach to Target Protein-Protein Interactions.
Chembiochem, 14, 2013
3VMJ
DownloadVisualize
BU of 3vmj by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-12-13
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
Acta Crystallogr.,Sect.F, 68, 2012
4B35
DownloadVisualize
BU of 4b35 by Molmil
Humanised monomeric RadA in complex with 4-methylester indole
分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, PHOSPHATE ION, methyl 1H-indole-4-carboxylate
著者Scott, D.E, Ehebauer, M.T, Pukala, T, Marsh, M, Blundell, T.L, Venkitaraman, A.R, Abell, C, Hyvonen, M.
登録日2012-07-20
公開日2013-02-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Using a Fragment-Based Approach to Target Protein-Protein Interactions.
Chembiochem, 14, 2013
4B3H
DownloadVisualize
BU of 4b3h by Molmil
Crystal structure of Mycobacterium tuberculosis fatty acid beta- oxidation complex
分子名称: FATTY ACID BETA-OXIDATION COMPLEX ALPHA-CHAIN FADB, FATTY ACID BETA-OXIDATION COMPLEX BETA-CHAIN FADA, GLYCEROL, ...
著者Venkatesan, R, Wierenga, R.
登録日2012-07-24
公開日2013-03-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Mycobacterial Beta-Oxidation Trifunctional Enzyme Reveals its Altered Assembly and Putative Substrate Channeling Pathway.
Acs Chem.Biol., 8, 2013
4B7C
DownloadVisualize
BU of 4b7c by Molmil
Crystal structure of hypothetical protein PA1648 from Pseudomonas aeruginosa.
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PROBABLE OXIDOREDUCTASE
著者Alphey, M.S, McMahon, S.A, Duthie, F.G, Naismith, J.H.
登録日2012-08-17
公開日2013-01-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Aeropath Project Targeting Pseudomonas Aeruginosa: Crystallographic Studies for Assessment of Potential Targets in Early-Stage Drug Discovery
Acta Crystallogr.,Sect.F, 69, 2013
2D0U
DownloadVisualize
BU of 2d0u by Molmil
Crystal structure of cyanide bound form of human indoleamine 2,3-dioxygenase
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CYANIDE ION, Indoleamine 2,3-dioxygenase, ...
著者Sugimoto, H, Oda, S, Otsuki, T, Hino, T, Yoshida, T, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-08-08
公開日2006-01-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of human indoleamine 2,3-dioxygenase: catalytic mechanism of O2 incorporation by a heme-containing dioxygenase.
Proc.Natl.Acad.Sci.Usa, 103, 2006
4GCV
DownloadVisualize
BU of 4gcv by Molmil
Structure of a Putative transcription factor (PA1374)from Pseudomonas aeruginosa
分子名称: GLYCEROL, PHOSPHATE ION, Putative transcription protein, ...
著者Choe, J, Kim, H.
登録日2012-07-31
公開日2013-07-24
最終更新日2013-07-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The X-ray crystal structure of PA1374 from Pseudomonas aeruginosa, a putative oxidative-stress sensing transcriptional regulator.
Biochem.Biophys.Res.Commun., 431, 2013
2YVG
DownloadVisualize
BU of 2yvg by Molmil
crystal structure of ferredoxin reductase, BPHA4 (blue-semiquinone)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Senda, T, Senda, M.
登録日2007-04-12
公開日2007-10-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular Mechanism of the Redox-dependent Interaction between NADH-dependent Ferredoxin Reductase and Rieske-type [2Fe-2S] Ferredoxin
J.Mol.Biol., 373, 2007
4BHT
DownloadVisualize
BU of 4bht by Molmil
Structural Determinants of Cofactor Specificity and Domain Flexibility in Bacterial Glutamate Dehydrogenases
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, NADP-SPECIFIC GLUTAMATE DEHYDROGENASE, ...
著者Oliveira, T, Sharkey, M, Engel, P, Khan, A.
登録日2013-04-06
公開日2013-06-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Nadp(+) -Dependent Glutamate Dehydrogenase from Escherichia Coli: Reflections on the Basis of Coenzyme Specificity in the Family of Glutamate Dehydrogenases.
FEBS J., 280, 2013
1MUN
DownloadVisualize
BU of 1mun by Molmil
CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI D138N MUTANT
分子名称: ADENINE GLYCOSYLASE, GLYCEROL, IMIDAZOLE, ...
著者Guan, Y, Tainer, J.A.
登録日1998-08-26
公開日1999-08-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily.
Nat.Struct.Biol., 5, 1998
3VD3
DownloadVisualize
BU of 3vd3 by Molmil
E. coli (lacZ) beta-galactosidase (N460D)
分子名称: Beta-galactosidase, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
著者Wheatley, R.W, Kappelhoff, J.C, Hahn, J.N, Dugdale, M.L, Dutkoski, M.J, Tamman, S.D, Fraser, M.E, Huber, R.E.
登録日2012-01-04
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Substitution for Asn460 cripples {beta}-galactosidase (Escherichia coli) by increasing substrate affinity and decreasing transition state stability.
Arch.Biochem.Biophys., 521, 2012
3VGE
DownloadVisualize
BU of 3vge by Molmil
Crystal structure of glycosyltrehalose trehalohydrolase (D252S)
分子名称: CITRATE ANION, GLYCEROL, Malto-oligosyltrehalose trehalohydrolase
著者Okazaki, N, Tamada, T, Feese, M.D, Kato, M, Miura, Y, Komeda, T, Kobayashi, K, Kondo, K, Kuroki, R.
登録日2011-08-09
公開日2012-06-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.
Protein Sci., 21, 2012
4AYO
DownloadVisualize
BU of 4ayo by Molmil
Structure of The GH47 processing alpha-1,2-mannosidase from Caulobacter strain K31
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE, ...
著者Thompson, A.J, Dabin, J, Iglesias-Fernandez, J, Iglesias-Fernandez, A, Dinev, Z, Williams, S.J, Siriwardena, A, Moreland, C, Hu, T.C, Smith, D.K, Gilbert, H.J, Rovira, C, Davies, G.J.
登録日2012-06-21
公開日2013-01-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献The Reaction Coordinate of a Bacterial Gh47 Alpha-Mannosidase: A Combined Quantum Mechanical and Structural Approach.
Angew.Chem.Int.Ed.Engl., 51, 2012

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon