PDB: 46006 件ウェブページステータス検索Chemie searchBIRD

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6UMY	Crystal structure of photoactive yellow protein (PYP); F96(4-IF) construct 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Lin, C.-Y, Romei, M.G, Boxer, S.G. 登録日 2019-10-10 公開日 2020-07-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (0.923 Å) 主引用文献 Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms. J Photochem Photobiol A Chem, 401, 2020
7RD1	The Capsid Structure of the ChAdOx1 viral vector/chimpanzee adenovirus Y25 分子名称: Hexon protein, Hexon-interlacing protein, Penton protein, ... 著者 Baker, A.T, Boyd, R.J, Sarkar, D, Vermaas, J.V, Williams, D, Singharoy, A. 登録日 2021-07-08 公開日 2021-12-15 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 ChAdOx1 interacts with CAR and PF4 with implications for thrombosis with thrombocytopenia syndrome. Sci Adv, 7, 2021
5TT6	T4 RNA Ligase 1 (K99M) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, T4 RNA ligase 1 著者 Goldgur, Y, Unciuleac, M.-C, Shuman, S.H. 登録日 2016-11-01 公開日 2017-03-08 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.187 Å) 主引用文献 Two-metal versus one-metal mechanisms of lysine adenylylation by ATP-dependent and NAD(+)-dependent polynucleotide ligases. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7R9W	LC3A in complex with Fragment 1-1 分子名称: 4-phenoxybenzoic acid, GLYCEROL, Microtubule-associated proteins 1A/1B light chain 3A 著者 Rouge, L, Steffek, M, Helgason, E, Dueber, E, Mulvihill, M. 登録日 2021-06-29 公開日 2022-01-12 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A Multifaceted Hit-Finding Approach Reveals Novel LC3 Family Ligands. Biochemistry, 62, 2023
7R9Z	LC3A in complex with Fragment 2-3 分子名称: (5-fluoro-1H-indol-3-yl)acetic acid, Microtubule-associated proteins 1A/1B light chain 3A 著者 Rouge, L, Steffek, M, Helgason, E, Dueber, E, Mulvihill, M. 登録日 2021-06-29 公開日 2022-01-12 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 A Multifaceted Hit-Finding Approach Reveals Novel LC3 Family Ligands. Biochemistry, 62, 2023
7RA0	LC3A in complex with Fragment 2-10 分子名称: (5-ethyl-2-methyl-1H-indol-3-yl)acetic acid, Microtubule-associated proteins 1A/1B light chain 3A 著者 Rouge, L, Steffek, M, Helgason, E, Dueber, E, Mulvihill, M. 登録日 2021-06-29 公開日 2022-01-12 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 A Multifaceted Hit-Finding Approach Reveals Novel LC3 Family Ligands. Biochemistry, 62, 2023
8QO1	Asymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 3 分子名称: Cytosolic protein, DUF228 domain-containing protein, Decoration protein P03, ... 著者 Rumnieks, J, Fuzik, T, Tars, K. 登録日 2023-10-11 公開日 2023-12-27 実験手法 ELECTRON MICROSCOPY (9.76 Å) 主引用文献 Structure of the Borrelia Bacteriophage phi BB1 Procapsid. J.Mol.Biol., 435, 2023
8QO0	Asymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 2 分子名称: Cytosolic protein, DUF228 domain-containing protein, Decoration protein P03, ... 著者 Rumnieks, J, Fuzik, T, Tars, K. 登録日 2023-09-27 公開日 2023-12-27 実験手法 ELECTRON MICROSCOPY (10.62 Å) 主引用文献 Structure of the Borrelia Bacteriophage phi BB1 Procapsid. J.Mol.Biol., 435, 2023
4XZE	The crystal structure of Hazara virus nucleoprotein 分子名称: Nucleoprotein 著者 Guo, Y, Wang, W, Liu, X, Wang, X, Wang, J, Huo, T, Liu, B. 登録日 2015-02-04 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural and Functional Diversity of Nairovirus-Encoded Nucleoproteins. J.Virol., 89, 2015
6XQI	Structure of HIV-1 Vpr in complex with the human nucleotide excision repair protein hHR23A 分子名称: ASN-PRO-LEU-GLU-PHE-LEU, Protein Vpr, UV excision repair protein RAD23 homolog A, ... 著者 Calero, G.C, Wu, Y, Weiss, S.C. 登録日 2020-07-09 公開日 2021-08-11 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Structure of HIV-1 Vpr in complex with the human nucleotide excision repair protein hHR23A. Nat Commun, 12, 2021
5JP9	Crystal Structure of cytidine monophosphate hydroxymethylase MilA with dCMP 分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, CMP 5-hydroxymethylase 著者 Zhao, G, He, X. 登録日 2016-05-03 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 Structural basis of the substrate preference towards CMP for a thymidylate synthase MilA involved in mildiomycin biosynthesis Sci Rep, 6, 2016
5JQZ	Designed two-ring homotetramer at 3.8A resolution 分子名称: De novo designed homotetramer 著者 Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Oberdorfer, G, Boyken, S.E, Chen, Z. 登録日 2016-05-05 公開日 2016-06-29 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.83 Å) 主引用文献 De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity. Science, 352, 2016
6UN2	Crystal structure of photoactive yellow protein (PYP); C69U construct (selenocysteine incorporation) 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Lin, C.-Y, Romei, M.G, Boxer, S.G. 登録日 2019-10-10 公開日 2020-07-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (0.97 Å) 主引用文献 Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms. J Photochem Photobiol A Chem, 401, 2020
7TGP	E176T/Y188G variant of the internal UBA Domain of HHR23A 分子名称: UV excision repair protein RAD23 homolog A 著者 Rothfuss, M, Bowler, B.E, McClelland, L.J, Sprang, S.R. 登録日 2022-01-08 公開日 2023-04-12 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 High-Accuracy Prediction of Stabilizing Surface Mutations to the Three-Helix Bundle, UBA(1), with EmCAST. J.Am.Chem.Soc., 145, 2023
4XZA	The crystal structure of Erve virus nucleoprotein 分子名称: Nucleoprotein 著者 Guo, Y, Wang, W, Liu, X, Wang, X, Wang, J, Huo, T, Liu, B. 登録日 2015-02-04 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and Functional Diversity of Nairovirus-Encoded Nucleoproteins. J.Virol., 89, 2015
7AJJ	bovine ATP synthase dimer state3:state3 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ... 著者 Spikes, T.E, Montgomery, M.G, Walker, J.E. 登録日 2020-09-29 公開日 2021-02-03 最終更新日 2021-02-24 実験手法 ELECTRON MICROSCOPY (13.1 Å) 主引用文献 Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes. Proc.Natl.Acad.Sci.USA, 118, 2021
7UG9	Crystal structure of RNase AM PHP domain 分子名称: 5'-3' exoribonuclease, MANGANESE (II) ION, SULFATE ION 著者 Doamekpor, S.K, Tong, L. 登録日 2022-03-24 公開日 2022-08-31 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Identification of a novel deFADding activity in human, yeast and bacterial 5' to 3' exoribonucleases. Nucleic Acids Res., 50, 2022
3GBF	Phpd with cadmium complexed with hydroethylphosphonate (HEP) 分子名称: (2-hydroxyethyl)phosphonic acid, CADMIUM ION, PhpD 著者 Zhang, H, Nair, S.K. 登録日 2009-02-19 公開日 2009-06-09 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 An Unusual Carbon-Carbon Bond Cleavage Reaction in the Biosynthesis of the Herbicide Phosphinothricin To be Published
7AJD	bovine ATP synthase dimer state1:state3 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ... 著者 Spikes, T.E, Montgomery, M.G, Walker, J.E. 登録日 2020-09-29 公開日 2021-02-03 最終更新日 2021-02-24 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes. Proc.Natl.Acad.Sci.USA, 118, 2021
7AJC	bovine ATP synthase dimer state1:state2 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ... 著者 Spikes, T.E, Montgomery, M.G, Walker, J.E. 登録日 2020-09-29 公開日 2021-02-03 最終更新日 2021-02-24 実験手法 ELECTRON MICROSCOPY (11.9 Å) 主引用文献 Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes. Proc.Natl.Acad.Sci.USA, 118, 2021
4XZ8	The crystal structure of Erve virus nucleoprotein 分子名称: Nucleoprotein 著者 Guo, Y, Wang, W, Liu, X, Wang, X, Wang, J, Huo, T, Liu, B. 登録日 2015-02-04 公開日 2015-09-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural and Functional Diversity of Nairovirus-Encoded Nucleoproteins. J.Virol., 89, 2015
8DKB	Crystal Structure of human YEATS4 in complex with Pfizer small molecule compound 3b 分子名称: N-ethyl-1-{(3S,4S)-1-[(1-hydroxycyclohexyl)methyl]-3-methylpiperidin-4-yl}-2-methyl-1H-benzimidazole-5-carboxamide, YEATS domain-containing protein 4 著者 Dias, J.M, Byrnes, L.J, Varghese, A.H. 登録日 2022-07-05 公開日 2023-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.58 Å) 主引用文献 Discovery of High-Affinity Small-Molecule Binders of the Epigenetic Reader YEATS4. J.Med.Chem., 66, 2023
5H52	Structure of Titanium-bound human serum transferrin 分子名称: CITRIC ACID, MALONATE ION, Serotransferrin, ... 著者 Curtin, J.P, Wang, M, Sun, H. 登録日 2016-11-04 公開日 2017-11-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The role of citrate, lactate and transferrin in determining titanium release from surgical devices into human serum. J. Biol. Inorg. Chem., 23, 2018
7AJB	bovine ATP synthase dimer state1:state1 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ATP synthase F(0) complex subunit B1, mitochondrial, ... 著者 Spikes, T.E, Montgomery, M.G, Walker, J.E. 登録日 2020-09-29 公開日 2021-02-03 最終更新日 2021-02-24 実験手法 ELECTRON MICROSCOPY (9.2 Å) 主引用文献 Interface mobility between monomers in dimeric bovine ATP synthase participates in the ultrastructure of inner mitochondrial membranes. Proc.Natl.Acad.Sci.USA, 118, 2021
7AJU	Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Flemming, D, Venuta, G.L, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2020-09-29 公開日 2020-12-30 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome. Mol.Cell, 81, 2021

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