PDB: 659 件ウェブページステータス検索Chemie searchBIRD

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4A8D	DegP dodecamer with bound OMP 分子名称: OUTER MEMBRANE PROTEIN C, PERIPLASMIC SERINE ENDOPROTEASE DEGP 著者 Malet, H, Krojer, T, Sawa, J, Schafer, E, Saibil, H.R, Ehrmann, M, Clausen, T. 登録日 2011-11-20 公開日 2012-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (28 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
3ZRT	Crystal structure of human PSD-95 PDZ1-2 分子名称: DISKS LARGE HOMOLOG 4 著者 Sorensen, P.L, Kastrup, J.S, Gajhede, M. 登録日 2011-06-19 公開日 2012-03-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.398 Å) 主引用文献 A High-Affinity, Dimeric Inhibitor of Psd-95 Bivalently Interacts with Pdz1-2 and Protects Against Ischemic Brain Damage. Proc.Natl.Acad.Sci.USA, 109, 2012
3AXA	Crystal structure of afadin PDZ domain in complex with the C-terminal peptide from nectin-3 分子名称: Afadin, Nectin-3 著者 Fujiwara, Y, Goda, N, Narita, H, Satomura, K, Nakagawa, A, Sakisaka, T, Suzuki, M, Hiroaki, H. 登録日 2011-03-31 公開日 2012-04-25 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 Crystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site. Protein Sci., 24, 2015
2LOB	PDZ Domain of CAL (Cystic Fibrosis Transmembrane Regulator-Associated Ligand) 分子名称: Cystic fibrosis transmembrane conductance regulator, Golgi-associated PDZ and coiled-coil motif-containing protein 著者 Piserchio, A, Fellows, A, Madden, D.R, Mierke, D.F. 登録日 2012-01-20 公開日 2012-06-13 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Association of the cystic fibrosis transmembrane regulator with CAL: structural features and molecular dynamics. Biochemistry, 44, 2005
3SUZ	Crystal structure of Rat Mint2 PPC 分子名称: Amyloid beta A4 precursor protein-binding family A member 2 著者 Shen, Y, Long, J, Yan, X, Xie, X. 登録日 2011-07-11 公開日 2012-07-11 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Open-closed motion of Mint2 regulates APP metabolism J Mol Cell Biol, 5, 2013
3TMH	Crystal structure of dual-specific A-kinase anchoring protein 2 in complex with cAMP-dependent protein kinase A type II alpha and PDZK1 分子名称: A-kinase anchor protein 10, mitochondrial, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, ... 著者 Sarma, G.N, Phan, R.H, Sankaran, B, Taylor, S.S. 登録日 2011-08-31 公開日 2012-09-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Differential mode of D-AKAP2 to PKA isoforms: Insights from D-AKAP2 PKA RII PDZK1 ternary complex structure To be Published
4AMH	Influence of circular permutation on the folding pathway of a PDZ domain 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DISKS LARGE HOMOLOG 1, GLYCEROL 著者 Hultqvist, G, Punekar, A.S, Chi, C.N, Selmer, M, Gianni, S, Jemth, P. 登録日 2012-03-10 公開日 2012-12-05 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Tolerance of Protein Folding to a Circular Permutation in a Pdz Domain Plos One, 7, 2012
4G69	Structure of the Human Discs Large 1 PDZ2 - Adenomatous Polyposis Coli Cytoskeletal Polarity Complex 分子名称: Adenomatous polyposis coli protein, Disks large homolog 1 著者 Slep, K.C. 登録日 2012-07-18 公開日 2012-12-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of the Human Discs Large 1 PDZ2- Adenomatous Polyposis Coli Cytoskeletal Polarity Complex: Insight into Peptide Engagement and PDZ Clustering. Plos One, 7, 2012
3SFJ	Crystal Structure of Tax-Interacting Protein-1 (TIP-1) PDZ domain bound to iCAL36 inhibitor peptide 分子名称: Tax1-binding protein 3, decameric peptide iCAL36 著者 Amacher, J.F, Madden, D.R. 登録日 2011-06-13 公開日 2012-12-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.24 Å) 主引用文献 A CAL Inhibitor with Single-PDZ Specificity Rescues deltaF508-CFTR To be Published
4E34	Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36 (ANSRWPTSII) peptide 分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, decameric peptide, ... 著者 Amacher, J.F, Beck, T, Madden, D.R. 登録日 2012-03-09 公開日 2012-12-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.395 Å) 主引用文献 Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP. J.Biol.Chem., 288, 2013
4E3B	Crystal structure of Tax-Interacting Protein-1 (TIP-1) PDZ domain bound to iCAL36-L (ANSRWPTSIL) peptide 分子名称: Tax1-binding protein 3, iCAL50 peptide 著者 Amacher, J.F, Madden, D.R. 登録日 2012-03-09 公開日 2012-12-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP. J.Biol.Chem., 288, 2013
4E35	Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36-L (ANSRWPTSIL) peptide 分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL50 peptide 著者 Amacher, J.F, Madden, D.R. 登録日 2012-03-09 公開日 2012-12-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP. J.Biol.Chem., 288, 2013
4F8K	Molecular analysis of the interaction between the prostacyclin receptor and the first PDZ domain of PDZK1 分子名称: Na(+)/H(+) exchange regulatory cofactor NHE-RF3, Prostacyclin receptor 著者 Kocher, O, Birrane, G, Kinsella, B.T, Mulvaney, E.P. 登録日 2012-05-17 公開日 2013-02-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Molecular Analysis of the Prostacyclin Receptor's Interaction with the PDZ1 Domain of Its Adaptor Protein PDZK1. Plos One, 8, 2013
4GVD	Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in complex with Syndecan1 Peptide 分子名称: 5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID), CHLORIDE ION, SODIUM ION, ... 著者 Liu, X, Shepherd, T.R, Murray, A.M, Xu, Z, Fuentes, E.J. 登録日 2012-08-30 公開日 2013-03-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics. Structure, 21, 2013
4GVC	Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in complex with phosphorylated Syndecan1 Peptide 分子名称: 5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID), CHLORIDE ION, SODIUM ION, ... 著者 Liu, X, Shepherd, T.R, Murray, A.M, Xu, Z, Fuentes, E.J. 登録日 2012-08-30 公開日 2013-03-13 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics. Structure, 21, 2013
3VQF	Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein 分子名称: E3 ubiquitin-protein ligase LNX 著者 Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H. 登録日 2012-03-22 公開日 2013-03-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.199 Å) 主引用文献 Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase To be Published
3VQG	Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein 分子名称: C-terminal peptide from Immunoglobulin superfamily member 5, E3 ubiquitin-protein ligase LNX, SULFATE ION 著者 Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H. 登録日 2012-03-23 公開日 2013-03-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase To be Published
4H11	Interaction partners of PSD-93 studied by X-ray crystallography and fluorescent polarization spectroscopy 分子名称: ACETATE ION, Disks large homolog 2, SULFATE ION 著者 Fiorentini, M, Kastrup, J.S, Gajhede, M. 登録日 2012-09-10 公開日 2013-04-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Interaction partners of PSD-93 studied by X-ray crystallography and fluorescence polarization spectroscopy. Acta Crystallogr.,Sect.D, 69, 2013
2M0T	Structural characterization of the extended PDZ1 domain from NHERF1 分子名称: Na(+)/H(+) exchange regulatory cofactor NHE-RF1 著者 Bhattacharya, S, Ju, J.H, Cowburn, D, Bu, Z. 登録日 2012-11-06 公開日 2013-04-24 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Ligand-Induced Dynamic Changes in Extended PDZ Domains from NHERF1. J.Mol.Biol., 425, 2013
2M0U	Complex structure of C-terminal CFTR peptide and extended PDZ1 domain from NHERF1 分子名称: C-terminal CFTR peptide, Na(+)/H(+) exchange regulatory cofactor NHE-RF1 著者 Bhattacharya, S, Ju, J.H, Cowburn, D, Bu, Z. 登録日 2012-11-06 公開日 2013-04-24 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Ligand-Induced Dynamic Changes in Extended PDZ Domains from NHERF1. J.Mol.Biol., 425, 2013
2M0V	Complex structure of C-terminal CFTR peptide and extended PDZ2 domain from NHERF1 分子名称: C-terminal CFTR peptide, Na(+)/H(+) exchange regulatory cofactor NHE-RF1 著者 Bhattacharya, S, Ju, J.H, Cowburn, D, Bu, Z. 登録日 2012-11-06 公開日 2013-04-24 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Ligand-Induced Dynamic Changes in Extended PDZ Domains from NHERF1. J.Mol.Biol., 425, 2013
2M3M	Solution structure of a complex consisting of hDlg/SAP-97 residues 318-406 and HPV51 oncoprotein E6 residues 141-151 分子名称: Disks large homolog 1, Protein E6 著者 Mischo, A, Ohlenschlager, O, Gorlach, M. 登録日 2013-01-22 公開日 2013-05-15 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Structural insights into a wildtype domain of the oncoprotein E6 and its interaction with a PDZ domain. Plos One, 8, 2013
2LUI	Structure of the PICK PDZ domain in complex with the DAT C-terminal 分子名称: PICK1 PDZ DOMAIN FUSED TO THE C10 DAT LIGAND 著者 Erlendsson, S, Rathje, M, Heidarsson, P.O, Poulsen, F.M, Madsen, K.L, Teilum, K, Gether, U. 登録日 2012-06-14 公開日 2013-06-19 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Protein interacting with C-kinase 1 (PICK1) binding promiscuity relies on unconventional PSD-95/discs-large/ZO-1 homology (PDZ) binding modes for nonclass II PDZ ligands. J.Biol.Chem., 289, 2014
4L8N	Crystal structure of a PDZ domain protein (BDI_1242) from Parabacteroides distasonis ATCC 8503 at 2.50 A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ETHANOL, MAGNESIUM ION, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2013-06-17 公開日 2013-06-26 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of a PDZ domain protein (BDI_1242) from Parabacteroides distasonis ATCC 8503 at 2.50 A resolution To be published
2M10	trans form of a photoswitchable PDZ domain crosslinked with an azobenzene derivative 分子名称: 3,3'-(E)-diazene-1,2-diylbis{6-[(chloroacetyl)amino]benzenesulfonic acid}, Tyrosine-protein phosphatase non-receptor type 13 著者 Walser, R. 登録日 2012-11-09 公開日 2013-07-03 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Kinetic response of a photoperturbed allosteric protein. Proc.Natl.Acad.Sci.USA, 110, 2013

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