PDB: 2044 件ウェブページステータス検索Chemie searchBIRD

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7ODC	CRYSTAL STRUCTURE ORNITHINE DECARBOXYLASE FROM MOUSE, TRUNCATED 37 RESIDUES FROM THE C-TERMINUS, TO 1.6 ANGSTROM RESOLUTION 分子名称: PROTEIN (ORNITHINE DECARBOXYLASE), PYRIDOXAL-5'-PHOSPHATE 著者 Kern, A.D, Oliveira, M.A, Coffino, P, Hackert, M.L. 登録日 1999-03-03 公開日 1999-10-22 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of mammalian ornithine decarboxylase at 1.6 A resolution: stereochemical implications of PLP-dependent amino acid decarboxylases. Structure Fold.Des., 7, 1999
5T3I	cyan fluorescence protein soaked with selenourea for 5 min 分子名称: Green fluorescent protein, PHOSPHATE ION, selenourea 著者 Luo, Z, Dauter, Z. 登録日 2016-08-25 公開日 2016-11-30 最終更新日 2019-12-04 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep, 6, 2016
1KSD	The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 6.5. 分子名称: CALCIUM ION, Endo-b-1,4-glucanase 著者 Khademi, S, Guarino, L.A, Watanabe, H, Tokuda, G, Meyer, E.F. 登録日 2002-01-12 公開日 2003-01-21 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of an endoglucanase from termite, Nasutitermes takasagoensis. Acta Crystallogr.,Sect.D, 58, 2002
2HGD	Structure of S65A Y66F GFP variant with an oxidized chromophore 分子名称: Green fluorescent protein 著者 Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2006-06-26 公開日 2007-03-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis J.Am.Chem.Soc., 129, 2007
4DXI	Crystal Structure of an Ancestor of All Faviina Proteins 分子名称: GREEN FLUORESCENT PROTEIN, MAGNESIUM ION 著者 Kim, H, Wachter, R.M. 登録日 2012-02-27 公開日 2013-02-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A hinge migration mechanism unlocks the evolution of green-to-red photoconversion in GFP-like proteins. Structure, 23, 2015
8IHX	X-ray crystal structure of N372D mutant of endo-1,4-beta glucanase from Eisenia fetida 分子名称: CALCIUM ION, Endoglucanase, GLYCEROL, ... 著者 Kuroki, C, Hirano, Y, Nakazawa, M, Sakamoto, T, Tamada, T, Ueda, M. 登録日 2023-02-24 公開日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A single mutation Asp43Arg was increased 2.5-fold the catalytic activity and maintained the stability of cold-adapted endo-1,4-beta glucanase (Ef-EG2) from Eisenia fetida. Curr Res Biotechnol, 5, 2023
8IHY	X-ray crystal structure of Q387E mutant of endo-1,4-beta glucanase from Eisenia fetida 分子名称: CALCIUM ION, Endoglucanase, GLYCEROL, ... 著者 Kuroki, C, Hirano, Y, Nakazawa, M, Sakamoto, T, Tamada, T, Ueda, M. 登録日 2023-02-24 公開日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A single mutation Asp43Arg was increased 2.5-fold the catalytic activity and maintained the stability of cold-adapted endo-1,4-beta glucanase (Ef-EG2) from Eisenia fetida. Curr Res Biotechnol, 5, 2023
8AAB	S148F mutant of blue-to-red fluorescent timer mRubyFT 分子名称: mRubyFT S148F mutant of blue-to-red fluorescent timer 著者 Boyko, K.M, Nikolaeva, A.Y, Vlaskina, A.V, Dorovatovskii, P.V, Subach, O.M, Popov, V.O, Subach, F.V. 登録日 2022-06-30 公開日 2022-08-17 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 mRubyFT/S147I, a mutant of blue-to-red fluorescent timer Crystallography Reports, 2022
3DQ2	Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 1: Structure 23 in a Series of 26 High Pressure Structures 分子名称: Green fluorescent protein 著者 Barstow, B, Kim, C.U. 登録日 2008-07-09 公開日 2008-09-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3BE4	Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, GLYCEROL, ... 著者 Wernimont, A.K, Lew, J, Kozieradzki, I, Lin, Y.H, Sun, X, Khuu, C, Zhao, Y, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Hui, R, Artz, J.D, Amani, M, Structural Genomics Consortium (SGC) 登録日 2007-11-16 公開日 2007-12-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of Cryptosporidium parvum adenylate kinase cgd5_3360. To be Published
3DQ6	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 2: Structure 18 in a Series of 26 High Pressure Structures 分子名称: Green fluorescent protein 著者 Barstow, B, Kim, C.U. 登録日 2008-07-09 公開日 2008-09-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
6T39	Crystal structure of rsEGFP2 in its off-state determined by SFX 分子名称: Green fluorescent protein 著者 Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M. 登録日 2019-10-10 公開日 2020-02-19 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy. Nat Commun, 11, 2020
4KEX	Crystal structure analysis of a single amino acid deletion mutation in EGFP 分子名称: Green fluorescent protein 著者 Arpino, J.A.J, Rizkallah, P.J. 登録日 2013-04-26 公開日 2014-08-06 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural and dynamic changes associated with beneficial engineered single-amino-acid deletion mutations in enhanced green fluorescent protein. Acta Crystallogr.,Sect.D, 70, 2014
5AZB	Crystal structure of Escherichia coli Lgt in complex with phosphatidylglycerol and the inhibitor palmitic acid 分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, PALMITIC ACID, Prolipoprotein diacylglyceryl transferase, ... 著者 Zhang, X.C, Mao, G, Zhao, Y. 登録日 2015-09-30 公開日 2016-01-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of E. coli lipoprotein diacylglyceryl transferase Nat Commun, 7, 2016
8YLZ	Structure of a cis-Geranylfarnesyl Diphosphate Synthase from Streptomyces clavuligerus 分子名称: Isoprenyl transferase 著者 Li, F.R, Wang, Q.L, Pan, X.M, Dong, L.B. 登録日 2024-03-07 公開日 2024-05-08 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Discovery, Structure, and Engineering of a cis-Geranylfarnesyl Diphosphate Synthase. Angew.Chem.Int.Ed.Engl., 63, 2024
2AWJ	GFP R96M pre-cyclized intermediate in chromophore formation 分子名称: MAGNESIUM ION, green-fluorescent protein 著者 Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2005-09-01 公開日 2006-04-18 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis. Biochemistry, 44, 2005
1Q73	S65T Q80R Y145C T203C Green Fluorescent Protein (GFP) pH 8.5 分子名称: Green Fluorescent Protein 著者 Jain, R.K, Ranganathan, R. 登録日 2003-08-15 公開日 2004-02-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Local complexity of amino acid interactions in a protein core. Proc.Natl.Acad.Sci.USA, 101, 2004
3WUP	Crystal Structure of the Ubiquitin-Binding Zinc Finger (UBZ) Domain of the Human DNA Polymerase Eta 分子名称: CHLORIDE ION, DNA polymerase eta, GLYCEROL, ... 著者 Suzuki, N, Wakatsuki, S, Kawasaki, S. 登録日 2014-05-01 公開日 2015-06-17 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1. Febs J., 283, 2016
3GEX	1.6 angstrom crystal structure of fluorescent protein Cypet 分子名称: Green fluorescent protein 著者 Hu, X, Liu, R. 登録日 2009-02-26 公開日 2010-03-09 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 1.6 angstrom crystal structure of fluorescent protein Cypet To be Published
1ZIN	ADENYLATE KINASE WITH BOUND AP5A 分子名称: ADENYLATE KINASE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION 著者 Berry, M.B, Phillips Jr, G.N. 登録日 1996-06-07 公開日 1997-06-16 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structures of Bacillus stearothermophilus adenylate kinase with bound Ap5A, Mg2+ Ap5A, and Mn2+ Ap5A reveal an intermediate lid position and six coordinate octahedral geometry for bound Mg2+ and Mn2+. Proteins, 32, 1998
3AI4	Crystal structure of yeast enhanced green fluorescent protein - mouse polymerase iota ubiquitin binding motif fusion protein 分子名称: SULFATE ION, yeast enhanced green fluorescent protein,DNA polymerase iota 著者 Suzuki, N, Wakatsuki, S, Kawasaki, M. 登録日 2010-05-10 公開日 2010-09-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystallization of small proteins assisted by green fluorescent protein Acta Crystallogr.,Sect.D, 66, 2010
3U0N	Crystal structure of the engineered fluorescent protein mRuby, crystal form 2 分子名称: SULFATE ION, mRuby 著者 Akerboom, J, Looger, L.L, Schreiter, E.R. 登録日 2011-09-28 公開日 2012-10-03 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front Mol Neurosci, 6, 2013
4W6T	Crystal Structure of Full-Length Split GFP Mutant E115H/T118H With Copper Mediated Crystal Contacts, P 43 21 2 Space Group 分子名称: 1,2-ETHANEDIOL, BROMIDE ION, COPPER (II) ION, ... 著者 Leibly, D.J, Waldo, G.S, Yeates, T.O. 登録日 2014-08-20 公開日 2015-02-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.604 Å) 主引用文献 A Suite of Engineered GFP Molecules for Oligomeric Scaffolding. Structure, 23, 2015
6HOK	Structure of Beclin1 LIR (S96E) motif bound to GABARAP 分子名称: 1,2-ETHANEDIOL, Beclin-1,Gamma-aminobutyric acid receptor-associated protein 著者 Mouilleron, S, Birgisdottir, A.B, Bhujbal, Z, Wirth, M, Sjottem, E, Evjen, G, Zhang, W, Lee, R, O'Reilly, N, Tooze, S, Lamark, T, Johansen, T. 登録日 2018-09-17 公開日 2019-02-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Members of the autophagy class III phosphatidylinositol 3-kinase complex I interact with GABARAP and GABARAPL1 via LIR motifs. Autophagy, 15, 2019
3G9A	Green fluorescent protein bound to minimizer nanobody 分子名称: Green fluorescent protein, Minimizer 著者 Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U. 登録日 2009-02-13 公開日 2009-12-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.614 Å) 主引用文献 Modulation of protein properties in living cells using nanobodies Nat.Struct.Mol.Biol., 17, 2010

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