2HGD

Structure of S65A Y66F GFP variant with an oxidized chromophore

Summary for 2HGD

Related2hcg 2HGY
DescriptorGreen fluorescent protein (2 entities in total)
Functional Keywordspost-translational modification, cyclization, oxidation, fluorophore, gfp, luminescent protein
Biological sourceAequorea victoria
Total number of polymer chains1
Total molecular weight26825.14
Authors
Barondeau, D.P.,Kassmann, C.J.,Tainer, J.A.,Getzoff, E.D. (deposition date: 2006-06-26, release date: 2007-03-27, Last modification date: 2011-07-13)
Primary citation
Barondeau, D.P.,Kassmann, C.J.,Tainer, J.A.,Getzoff, E.D.
The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129:3118-3126, 2007
PubMed: 17326633 (PDB entries with the same primary citation)
DOI: 10.1021/ja063983u
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.6 Å)
NMR Information
?

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.239100.5%2.7%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2hgd
no rotation
Molmil generated image of 2hgd
rotated about x axis by 90°
Molmil generated image of 2hgd
rotated about y axis by 90°
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2019 Protein Data Bank Japan