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8J5F
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Crystal structure of kinase AbmG in complex with cytidine and ADP
分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, ADENOSINE-5'-DIPHOSPHATE, Deoxyadenosine/deoxycytidine kinase
著者Ushimaru, R, Mori, T, Liu, H.-w, Abe, I.
登録日2023-04-22
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of kinase AbmG in complex with cytidine and ADP
To Be Published
8J5B
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BU of 8j5b by Molmil
Crystal structure of P domain from norovirus GI.4 capsid protein.
分子名称: Capsid protein
著者Katsura, K, Sakai, N, Hasegawa, K, Kimura-Someya, T, Shirouzu, M.
登録日2023-04-21
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of P domain from norovirus GI.4 capsid protein.
To Be Published
8J5A
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Single-particle cryo-EM structure of mouse apoferritin at 1.19 Angstrom resolution (Dataset A)
分子名称: Ferritin heavy chain, SODIUM ION
著者Kawakami, K, Maki-Yonekura, S, Hamaguchi, T, Takaba, K, Yonekura, K.
登録日2023-04-21
公開日2023-07-12
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (1.19 Å)
主引用文献Measurement of charges and chemical bonding in a cryo-EM structure.
Commun Chem, 6, 2023
8J59
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The structure of a novel thermophilic-like old yellow enzyme from Aspergillus flavus-AfOYE1
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Li, N, Wang, Y.
登録日2023-04-21
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The structure of a novel thermophilic-like old yellow enzyme from Aspergillus flavus-AfOYE1
To Be Published
8J53
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Crystal structure of Bacteroides salyersiae GH31 alpha-galactosidase
分子名称: GH31 alpha-galactosidase
著者Ikegaya, M, Miyazaki, T.
登録日2023-04-21
公開日2023-07-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure-function analysis of bacterial GH31 alpha-galactosidases specific for alpha-(1→4)-galactobiose.
Febs J., 290, 2023
8J52
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Crystal structure of Flavihumibacter petaseus GH31 alpha-galactosidase mutant D304A in complex with alpha-1,4-galactobiose
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GH31 alpha-galactosidase, ...
著者Ikegaya, M, Miyazaki, T.
登録日2023-04-21
公開日2023-07-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-function analysis of bacterial GH31 alpha-galactosidases specific for alpha-(1→4)-galactobiose.
Febs J., 290, 2023
8J51
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Crystal structure of Flavihumibacter petaseus GH31 alpha-galactosidase in complex with galactose
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GH31 alpha-galactosidase, ...
著者Ikegaya, M, Miyazaki, T.
登録日2023-04-21
公開日2023-07-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure-function analysis of bacterial GH31 alpha-galactosidases specific for alpha-(1→4)-galactobiose.
Febs J., 290, 2023
8J50
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Crystal structure of Flavihumibacter petaseus GH31 alpha-galactosidase
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GH31 alpha-galactosidase
著者Ikegaya, M, Miyazaki, T.
登録日2023-04-21
公開日2023-07-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-function analysis of bacterial GH31 alpha-galactosidases specific for alpha-(1→4)-galactobiose.
Febs J., 290, 2023
8J4Z
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Human 3-methylcrotonyl-CoA carboxylase in BCCP-CTS state with substrate
分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial, ...
著者Liu, D.S, Su, J.Y.
登録日2023-04-21
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Human 3-methylcrotonyl-CoA carboxylase in BCCP-CTS state with substrate
To Be Published
8J4J
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X-ray structure of a ferric ion-binding protein A (FbpA) from Vibrio metschnikovii in complex with ferric ion
分子名称: CARBONATE ION, FE (III) ION, Ferric iron ABC transporter iron-binding protein
著者Lu, P, Jiang, J, Nagata, K.
登録日2023-04-20
公開日2024-01-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Molecular mechanism of Fe 3+ binding inhibition to Vibrio metschnikovii ferric ion-binding protein, FbpA, by rosmarinic acid and its hydrolysate, danshensu.
Protein Sci., 33, 2024
8J4H
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X-ray structure of a ferric ion-binding protein A (FbpA) from Vibrio metschnikovii in complex with Danshensu (DSS)
分子名称: (2~{R})-3-[3,4-bis(oxidanyl)phenyl]-2-oxidanyl-propanoic acid, Ferric iron ABC transporter iron-binding protein
著者Lu, P, Jiang, J, Nagata, K.
登録日2023-04-20
公開日2024-01-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Molecular mechanism of Fe 3+ binding inhibition to Vibrio metschnikovii ferric ion-binding protein, FbpA, by rosmarinic acid and its hydrolysate, danshensu.
Protein Sci., 33, 2024
8J4F
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Structure of human Nav1.7 in complex with Hardwickii acid
分子名称: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, (4~{a}~{R},5~{S},6~{R},8~{a}~{R})-5-[2-(furan-3-yl)ethyl]-5,6,8~{a}-trimethyl-3,4,4~{a},6,7,8-hexahydronaphthalene-1-carboxylic acid, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
著者Wu, Q.R, Yan, N.
登録日2023-04-19
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural mapping of Na v 1.7 antagonists.
Nat Commun, 14, 2023
8J4C
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YeeE(TsuA)-YeeD(TsuB) complex for thiosulfate uptake
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Spirochaeta thermophila YeeE(TsuA)-YeeD(TsuB),UPF0033 domain-containing protein, SirA-like domain-containing protein (chimera), ...
著者Ikei, M, Miyazaki, R, Monden, K, Naito, Y, Takeuchi, A, Takahashi, Y.S, Tanaka, Y, Ichikawa, M, Tsukazaki, T.
登録日2023-04-19
公開日2024-03-27
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献Structure and function of YeeE-YeeD complex for sophisticated thiosulfate uptake
To Be Published
8J45
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Crystal structure of a Pichia pastoris-expressed IsPETase variant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Poly(ethylene terephthalate) hydrolase
著者Li, X, He, H.L, Long, X, Niu, D, Huang, J.-W, Chen, C.-C, Guo, R.-T.
登録日2023-04-19
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Complete decomposition of poly(ethylene terephthalate) by crude PET hydrolytic enzyme produced in Pichia pastoris
Chem Eng J, 2023
8J40
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Crystal Structure of CATB8 in complex with chloramphenicol
分子名称: CHLORAMPHENICOL, CatB8, GLYCEROL, ...
著者Liao, J, Kuang, L, Jiang, Y.
登録日2023-04-18
公開日2024-02-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Chloramphenicol Binding Sites of Acinetobacter baumannii Chloramphenicol Acetyltransferase CatB8.
Acs Infect Dis., 10, 2024
8J3Y
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Crystal structure of CBM6E E168Q in complex with oligosaccharides
分子名称: GLYCEROL, MAGNESIUM ION, Putative polysaccharide-binding protein, ...
著者He, C, Li, F.
登録日2023-04-18
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Structural insights into CBM6E from Saccharophagus degradans
To Be Published
8J3X
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Crystal structure of CBM6E from Saccharophagus degradans
分子名称: GLYCEROL, MAGNESIUM ION, Putative polysaccharide-binding protein
著者He, C, Li, F.
登録日2023-04-18
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into CBM6E from Saccharophagus degradans
To Be Published
8J3R
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BU of 8j3r by Molmil
Cryo-EM structure of the AsCas12f-HKRA-sgRNAS3-5v7-target DNA
分子名称: DNA (37-MER), DNA (38-MER), MAGNESIUM ION, ...
著者Hino, T, Omura, N.S, Nakagawa, R, Togashi, T, Takeda, N.S, Hiramoto, T, Tasaka, S, Hirano, H, Tokuyama, T, Uosaki, H, Ishiguro, H, Yamano, H, Ozaki, Y, Motooka, D, Mori, H, Kirita, Y, Kise, Y, Itoh, Y, Matoba, S, Aburatani, H, Yachie, N, Siksnys, V, Ohmori, T, Hoshino, A, Nureki, O.
登録日2023-04-18
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Minimal and most efficient genome editing Cas enzyme
To Be Published
8J3P
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Formate dehydrogenase mutant from from Candida dubliniensis M4 complexed with NADP+
分子名称: Formate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Ma, W, Zheng, Y.C, Geng, Q, Chen, C, Xu, J.H.
登録日2023-04-17
公開日2023-09-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Engineering a Formate Dehydrogenase for NADPH Regeneration.
Chembiochem, 24, 2023
8J3M
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BU of 8j3m by Molmil
Structure of GH1 Br2 beta-glucosidase from bovine rumen metagenome
分子名称: Beta-glucosidase, GLYCEROL, SULFATE ION
著者Kaenying, W, Kongsaeree, P.T, Tagami, T.
登録日2023-04-17
公開日2023-11-22
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Structural and mutational analysis of glycoside hydrolase family 1 Br2 beta-glucosidase derived from bovine rumen metagenome.
Heliyon, 9, 2023
8J2Y
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Acidimicrobiaceae bacterium photocobilins protein, dark state
分子名称: 5'-DEOXYADENOSINE, COBALAMIN, DI(HYDROXYETHYL)ETHER, ...
著者Zhang, S, Poddar, H, Levy, W.C, Leys, D.
登録日2023-04-15
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Photocobilins integrate B12 and bilin photochemistry for enzyme control.
Nat Commun, 15, 2024
8J2X
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Saccharothrix syringae photocobilins protein, light state
分子名称: BILIVERDINE IX ALPHA, COBALAMIN, Cobalamin-binding protein, ...
著者Zhang, S, Poddar, H, Levy, C, Leys, D.
登録日2023-04-15
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Photocobilins integrate B12 and bilin photochemistry for enzyme control.
Nat Commun, 15, 2024
8J2W
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Saccharothrix syringae photocobilins protein, dark state
分子名称: 1,4-DIETHYLENE DIOXIDE, 5'-DEOXYADENOSINE, BILIVERDINE IX ALPHA, ...
著者Zhang, S, Poddar, H, Levy, W.C, Leys, D.
登録日2023-04-15
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Photocobilins integrate B12 and bilin photochemistry for enzyme control.
Nat Commun, 15, 2024
8J2Q
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Crystal structure of Cypovirus Polyhedra mutant fused with c-Myc fragment
分子名称: Polyhedrin,Myc proto-oncogene protein
著者Kojima, M, Ueno, T, Abe, S, Hirata, K.
登録日2023-04-15
公開日2024-04-17
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献High-throughput structure determination of an intrinsically disordered protein using cell-free protein crystallization.
Proc.Natl.Acad.Sci.USA, 121, 2024
8J2N
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Exopolysaccharide phosphotransferase CpsY in Mycobacterium tuberculosis
分子名称: Exopolysaccharide phosphotransferase CpsY
著者Liu, D.F.
登録日2023-04-14
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Exopolysaccharide phosphotransferase CpsY in Mycobacterium tuberculosis
To Be Published

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件を2024-07-10に公開中

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