PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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7KJ4	SARS-CoV-2 Spike Glycoprotein with three ACE2 Bound 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ... 著者 Zhang, J, Xiao, T.S, Cai, Y.F, Chen, B. 登録日 2020-10-25 公開日 2020-11-11 最終更新日 2021-02-24 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 A trimeric human angiotensin-converting enzyme 2 as an anti-SARS-CoV-2 agent. Nat.Struct.Mol.Biol., 28, 2021
5L59	Plexin A1 full extracellular region, domains 1 to 10, to 6 angstrom, spacegroup P2(1) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. 登録日 2016-05-28 公開日 2016-07-06 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (6 Å) 主引用文献 Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
7L0W	Human Bocavirus 1 (pH 5.5) 分子名称: VP2 著者 Luo, M, Mietzsch, M, Agbandje-McKenna, M. 登録日 2020-12-13 公開日 2021-01-27 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.74 Å) 主引用文献 pH-Induced Conformational Changes of Human Bocavirus Capsids. J.Virol., 95, 2021
2M8K	A pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo 分子名称: RNA (48-MER) 著者 Cash, D.D, Cohen, O, Kim, N, Shefer, K, Brown, Y, Ulyanov, N.B, Tzfati, Y, Feigon, J. 登録日 2013-05-22 公開日 2013-06-19 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo. Proc.Natl.Acad.Sci.USA, 110, 2013
2MB1	NMR Structure of the Complete Internal Fusion Loop mutant I544A from Ebolavirus GP2 at pH 5.5 分子名称: Virion spike glycoprotein 著者 Tamm, L.K, Gregory, S.M. 登録日 2013-07-22 公開日 2014-04-09 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Ebolavirus Entry Requires a Compact Hydrophobic Fist at the Tip of the Fusion Loop. J.Virol., 88, 2014
5L5L	Plexin A4 full extracellular region, domains 1 to 8 modeled, data to 8 angstrom, spacegroup P2(1) 分子名称: Plexin-A4 著者 Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. 登録日 2016-05-28 公開日 2016-07-06 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (8.001 Å) 主引用文献 Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
2ZYH	mutant A. Fulgidus lipase S136A complexed with fatty acid fragment 分子名称: CALCIUM ION, HEXADECANE, Lipase, ... 著者 Chen, C.K, Ko, T.P, Guo, R.T, Wang, A.H. 登録日 2009-01-22 公開日 2009-06-16 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Structure of the alkalohyperthermophilic Archaeoglobus fulgidus lipase contains a unique C-terminal domain essential for long-chain substrate binding. J.Mol.Biol., 390, 2009
7Q42	Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of chromatin reader BAZ2B 分子名称: Bromodomain adjacent to zinc finger domain protein 2B, CITRIC ACID, E3 ubiquitin-protein ligase HERC2 著者 Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G. 登録日 2021-10-29 公開日 2022-11-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.95002484 Å) 主引用文献 Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of chromatin reader BAZ2B To Be Published
7Q55	Single Particle Cryo-EM structure of photosynthetic A8B8 glyceraldehyde-3-phosphate dehydrogenase hexadecamer (major conformer) from Spinacia oleracia. 分子名称: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, Glyceraldehyde-3-phosphate dehydrogenase B, ... 著者 Marotta, R, Fermani, S, Sparla, F, Trost, P, Del Giudice, A. 登録日 2021-11-02 公開日 2022-11-16 実験手法 ELECTRON MICROSCOPY (5.7 Å) 主引用文献 Unravelling the regulation pathway of photosynthetic AB-GAPDH. Acta Crystallogr D Struct Biol, 78, 2022
7Q56	Single Particle Cryo-EM structure of photosynthetic A8B8 glyceraldehyde-3-phosphate dehydrogenase (minor conformer) from Spinacia oleracea. 分子名称: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, Glyceraldehyde-3-phosphate dehydrogenase B, ... 著者 Marotta, R, Fermani, S, Sparla, F, Trost, P, Del Giudice, A. 登録日 2021-11-02 公開日 2022-11-16 実験手法 ELECTRON MICROSCOPY (7.1 Å) 主引用文献 Unravelling the regulation pathway of photosynthetic AB-GAPDH. Acta Crystallogr D Struct Biol, 78, 2022
5L6S	Crystal structure of E. coli ADP-glucose pyrophosphorylase (AGPase) in complex with a positive allosteric regulator beta-fructose-1,6-diphosphate (FBP) - AGPase*FBP 分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, Glucose-1-phosphate adenylyltransferase, SULFATE ION 著者 Cifuente, J.O, Albesa-Jove, D, Comino, N, Madariaga-Marcos, J, Agirre, J, Lopez-Fernandez, S, Garcia-Alija, M, Guerin, M.E. 登録日 2016-05-31 公開日 2016-09-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.04 Å) 主引用文献 Structural Basis of Glycogen Biosynthesis Regulation in Bacteria. Structure, 24, 2016
2MF1	Structural basis of the non-coding RNA RsmZ acting as protein sponge: Conformer R of RsmZ(1-72)/RsmE(dimer) 1to3 complex 分子名称: Carbon storage regulator homolog, RNA_(72-MER) 著者 Duss, O, Michel, E, Yulikov, M, Schubert, M, Jeschke, G, Allain, F.H.-T. 登録日 2013-10-02 公開日 2014-05-21 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural basis of the non-coding RNA RsmZ acting as a protein sponge. Nature, 509, 2014
5L8D	X-ray structure of NikA from Escherichia coli in complex with Ru(bis(pyrzol-1-yl)acetate scorpionate)(CO)2Cl 分子名称: ACETATE ION, CARBON MONOXIDE, CHLORIDE ION, ... 著者 Menage, S, Cavazza, C. 登録日 2016-06-07 公開日 2017-03-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Efficient conversion of alkenes to chlorohydrins by a Ru-based artificial enzyme. Chem. Commun. (Camb.), 53, 2017
2MHI	Solution structure of the CR4/5 domain of medaka telomerase RNA 分子名称: Medaka telomerase RNA 著者 Kim, N, Zhang, Q, Feigon, J. 登録日 2013-11-23 公開日 2013-12-25 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure and sequence elements of the CR4/5 domain of medaka telomerase RNA important for telomerase function. Nucleic Acids Res., 42, 2014
2MIZ	Structure of the m04/gp34 mouse Cytomegalovirus Immunoevasin core domain 分子名称: m04 immunoevasin 著者 Sgourakis, N.G, Natarajan, K, Margulies, D.H, Bax, A. 登録日 2013-12-21 公開日 2014-07-16 最終更新日 2014-10-22 実験手法 SOLUTION NMR 主引用文献 The Structure of Mouse Cytomegalovirus m04 Protein Obtained from Sparse NMR Data Reveals a Conserved Fold of the m02-m06 Viral Immune Modulator Family. Structure, 22, 2014
3IKO	Crystal structure of the heterotrimeric Sec13-Nup145C-Nup84 nucleoporin complex 分子名称: Nucleoporin NUP145C, Nucleoporin NUP84, Protein transport protein SEC13 著者 Nagy, V, Hsia, K.-C, Debler, E.W, Davenport, A, Blobel, G, Hoelz, A. 登録日 2009-08-06 公開日 2009-10-13 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structure of a trimeric nucleoporin complex reveals alternate oligomerization states. Proc.Natl.Acad.Sci.USA, 106, 2009
7AH5	Crystal structure of indoleamine 2,3-dioxygenase 1 (IDO1) in complex with ferric heme and MMG-0706 分子名称: 4-chloranyl-2-(1~{H}-1,2,4-triazol-5-yl)aniline, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE 著者 Roehrig, U.F, Reynaud, A, Pojer, F, Michielin, O, Zoete, V. 登録日 2020-09-24 公開日 2021-02-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Azole-Based Indoleamine 2,3-Dioxygenase 1 (IDO1) Inhibitors. J.Med.Chem., 64, 2021
7KUV	Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with Acetate 分子名称: 1,2-ETHANEDIOL, ACETATE ION, PHOSPHATE ION, ... 著者 Herbst-Gervasoni, C.J, Christianson, D.W. 登録日 2020-11-25 公開日 2021-02-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 X-ray Crystallographic Snapshots of Substrate Binding in the Active Site of Histone Deacetylase 10. Biochemistry, 60, 2021
2MCR	Solution structure of ShK-like immunomodulatory peptide from Brugia malayi (filarial worm) 分子名称: Probable zinc metalloproteinase, putative 著者 Chhabra, S, Swarbrick, J.D, Pennington, M.W, Chang, S.C, Norton, R.S. 登録日 2013-08-22 公開日 2014-07-02 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Kv1.3 channel-blocking immunomodulatory peptides from parasitic worms: implications for autoimmune diseases. Faseb J., 28, 2014
3IN5	Structure of human DNA polymerase kappa inserting dATP opposite an 8-oxoG DNA lesion 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*C*CP*TP*AP*(8OG)P*GP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), DNA (5'-D(*GP*G*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*(DOC))-3'), ... 著者 Silverstein, T.D, Vasquez-Del Carpio, R, Aggarwal, A.K. 登録日 2009-08-11 公開日 2009-09-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structure of human DNA polymerase kappa inserting dATP opposite an 8-oxoG DNA lesion PLOS ONE, 4, 2009
8PHQ	Top cap of the Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell 分子名称: Decorator protein P03, Decorator protein P05, Major capsid protein, ... 著者 Rumnieks, J, Fuzik, T, Tars, K. 登録日 2023-06-20 公開日 2023-07-19 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.69 Å) 主引用文献 Structure of the Borrelia Bacteriophage phi BB1 Procapsid. J.Mol.Biol., 435, 2023
3IOI	Crystal structure of the Fucosylgalactoside alpha N-acetylgalactosaminyltransferase (GTA, cisAB mutant L266G, G268A) in complex with a novel UDP-Gal derived inhibitor (1GW) 分子名称: 5-(2-FORMYLTHIEN-5-YL)-URIDINE-5'-DIPHOSPHATE-ALPHA-D-GALACTOSE, Histo-blood group ABO system transferase, MANGANESE (II) ION, ... 著者 Pesnot, T, Jorgensen, R, Palcic, M.M, Wagner, G.K. 登録日 2009-08-14 公開日 2010-04-07 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structural and mechanistic basis for a new mode of glycosyltransferase inhibition. Nat.Chem.Biol., 6, 2010
7PX0	Drosophila melanogaster Aldehyde Oxidase 1 分子名称: AMMONIUM ION, Aldehyde oxidase 1, DI(HYDROXYETHYL)ETHER, ... 著者 Vilela-Alves, G, Mota, C, Romao, M.J. 登録日 2021-10-07 公開日 2022-11-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Drosophila melanogaster's Aldehyde Oxidase 1: The First Invertebrate AOX structure To Be Published
7Q48	Solution structure of an intramolecular RNA G-quadruplex formed by the 6A8U17U mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto onco-gene 分子名称: RNA (5'-R(*GP*GP*GP*CP*CP*AP*UP*UP*GP*GP*GP*UP*GP*GP*GP*AP*UP*CP*UP*GP*GP*G)-3') 著者 Wang, Z, Jurt, S, Dominguez-Martin, A, Johannsen, S, Sigel, R.K.O. 登録日 2021-10-29 公開日 2022-11-16 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Solution structure of an intramolecular RNA G-quadruplex formed by the 6A8U17U mutant from a 22mer guanine-rich sequence within the 5'UTR of BCL-2 proto onco-gene To Be Published
8PHS	Bottom cap of the Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell 分子名称: Decorator protein P03, Decorator protein P04, Decorator protein P05, ... 著者 Rumnieks, J, Fuzik, T, Tars, K. 登録日 2023-06-20 公開日 2023-07-19 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.82 Å) 主引用文献 Structure of the Borrelia Bacteriophage phi BB1 Procapsid. J.Mol.Biol., 435, 2023

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