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2UUO
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Crystal structure of MurD ligase in complex with D-Glu containing sulfonamide inhibitor
分子名称: N-{[6-(PENTYLOXY)NAPHTHALEN-2-YL]SULFONYL}-D-GLUTAMIC ACID, SULFATE ION, UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
著者Humljan, J, Kotnik, M, Contreras-Martel, C, Blanot, D, Urleb, U, Dessen, A, Solmajer, T, Gobec, S.
登録日2007-03-06
公開日2008-03-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Novel naphthalene-N-sulfonyl-D-glutamic acid derivatives as inhibitors of MurD, a key peptidoglycan biosynthesis enzyme.
J. Med. Chem., 51, 2008
3WX9
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Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PMP, GLA, 4AD, 2OG, GLU and KYA
分子名称: (2E)-pent-2-enedioic acid, 2-OXOGLUTARIC ACID, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ...
著者Okada, K, Angkawidjaja, C, Koga, Y, Kanaya, S.
登録日2014-07-28
公開日2014-09-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PMP, GLA, 4AD, 2OG, GLU and KYA
To be Published
2N8F
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Chemical shift assignments and structure calculation of spider toxin pi-hexatoxin-Hi1a
分子名称: spider toxin pi-hexatoxin-Hi1a
著者Chin, Y.K.-Y, Pineda, S.S, Mobli, M, King, G.F.
登録日2015-10-13
公開日2016-10-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Potent neuroprotection after stroke afforded by a double-knot spider-venom peptide that inhibits acid-sensing ion channel 1a.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7VFU
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BU of 7vfu by Molmil
Human N-type voltage gated calcium channel CaV2.2-alpha2/delta1-beta1 complex, bound to ziconotide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHOLESTEROL HEMISUCCINATE, ...
著者Dong, Y, Gao, Y, Wang, Y, Zhao, Y.
登録日2021-09-13
公開日2021-11-03
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Closed-state inactivation and pore-blocker modulation mechanisms of human Ca V 2.2.
Cell Rep, 37, 2021
7PZ9
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HBc-F97L premature secretion phenotype
分子名称: Capsid protein
著者Makbul, C, Boettcher, B.
登録日2021-10-11
公開日2021-12-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97.
Viruses, 13, 2021
6YAA
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Structure of the (SR) Ca2+-ATPase bound to the inhibitor compound CAD204520 and TNP-ATP
分子名称: 4-[2-[(2~{R})-2-[3-propyl-6-(trifluoromethyloxy)-1~{H}-indol-2-yl]piperidin-1-yl]ethyl]morpholine, POTASSIUM ION, SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O',3O'-METHYLENE-ADENINE-TRIPHOSPHATE, ...
著者Heit, S, Marchesini, M, Gherli, A, Montanaro, A, Patrizi, L, Sorrentino, C, Pagliaro, L, Rompietti, C, Kitara, S, Olesen, C.E, Moller, J.V, Savi, M, Bocchi, L, Vilella, R, Rizzi, F, Baglione, M, Rastelli, G, Loiacona, C, La Starza, R, Mecucci, C, Stegmair, K, Aversa, F, Stilli, D, Lund Winther, A.M, Sportoletti, P, Dalby-Brown, W, Roti, G, Bublitz, M.
登録日2020-03-11
公開日2020-05-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Blockade of Oncogenic NOTCH1 with the SERCA Inhibitor CAD204520 in T Cell Acute Lymphoblastic Leukemia.
Cell Chem Biol, 27, 2020
2UUP
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BU of 2uup by Molmil
Crystal structure of MurD ligase in complex with D-Glu containing sulfonamide inhibitor
分子名称: N-({6-[(4-CYANOBENZYL)OXY]NAPHTHALEN-2-YL}SULFONYL)-D-GLUTAMIC ACID, SULFATE ION, UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
著者Humljan, J, Kotnik, M, Contreras-Martel, C, Blanot, D, Urleb, U, Dessen, A, Solmajer, T, Gobec, S.
登録日2007-03-06
公開日2008-03-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Novel naphthalene-N-sulfonyl-D-glutamic acid derivatives as inhibitors of MurD, a key peptidoglycan biosynthesis enzyme.
J. Med. Chem., 51, 2008
7OI0
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BU of 7oi0 by Molmil
E.coli delta rbfA pre-30S ribosomal subunit class D
分子名称: 16S rRNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Maksimova, E, Korepanov, A, Baymukhametov, T, Kravchenko, O, Stolboushkina, E.
登録日2021-05-11
公開日2021-07-14
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献RbfA Is Involved in Two Important Stages of 30S Subunit Assembly: Formation of the Central Pseudoknot and Docking of Helix 44 to the Decoding Center.
Int J Mol Sci, 22, 2021
6AHW
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Crystal structure of circular-permutated YibK methyltransferase from Haemophilus influenzae
分子名称: circular-permutated tRNA (cytidine(34)-2'-O)-methyltransferase
著者Chuang, Y.C, Lyu, P.C, Hsu, S.T.D.
登録日2018-08-20
公開日2019-01-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Untying a Protein Knot by Circular Permutation.
J. Mol. Biol., 431, 2019
5ZYO
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Crystal Structure of domain-swapped Circular-Permuted YbeA (CP74) from Escherichia coli
分子名称: Ribosomal RNA large subunit methyltransferase H
著者Ko, K.T, Huang, K.F, Lyu, P.C, Hsu, S.T.D.
登録日2018-05-26
公開日2019-05-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Untying a Knotted SPOUT RNA Methyltransferase by Circular Permutation Results in a Domain-Swapped Dimer.
Structure, 27, 2019
7R6H
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RHCC in complex with o-carborane
分子名称: Tetrabrachion, ortho-carborane
著者Heide, F, McDougall, M, Stetefeld, J.
登録日2021-06-22
公開日2021-07-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Boron rich nanotube drug carrier system is suited for boron neutron capture therapy.
Sci Rep, 11, 2021
6XF4
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Crystal structure of STING REF variant in complex with E7766
分子名称: (1R,3R,15E,28R,29R,30R,31R,34R,36R,39S,41R)-29,41-difluoro-34,39-disulfanyl-2,33,35,38,40,42-hexaoxa-4,6,9,11,13,18,20,22,25,27-decaaza-34,39-diphosphaoctacyclo[28.6.4.1~3,36~.1~28,31~.0~4,8~.0~7,12~.0~19,24~.0~23,27~]dotetraconta-5,7,9,11,15,19,21,23,25-nonaene 34,39-dioxide (non-preferred name), 1,2-ETHANEDIOL, Stimulator of interferon genes protein
著者Chen, Y, Wang, J.Y, Kim, D.-S.
登録日2020-06-15
公開日2021-02-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献E7766, a Macrocycle-Bridged Stimulator of Interferon Genes (STING) Agonist with Potent Pan-Genotypic Activity.
Chemmedchem, 16, 2021
6XF3
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Crystal structure of STING in complex with E7766
分子名称: (1R,3R,15E,28R,29R,30R,31R,34R,36R,39S,41R)-29,41-difluoro-34,39-disulfanyl-2,33,35,38,40,42-hexaoxa-4,6,9,11,13,18,20,22,25,27-decaaza-34,39-diphosphaoctacyclo[28.6.4.1~3,36~.1~28,31~.0~4,8~.0~7,12~.0~19,24~.0~23,27~]dotetraconta-5,7,9,11,15,19,21,23,25-nonaene 34,39-dioxide (non-preferred name), Stimulator of interferon genes protein
著者Chen, Y, Wang, J.Y, Kim, D.-S.
登録日2020-06-15
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献E7766, a Macrocycle-Bridged Stimulator of Interferon Genes (STING) Agonist with Potent Pan-Genotypic Activity.
Chemmedchem, 16, 2021
8W68
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BU of 8w68 by Molmil
Crystal structure of Q9PR55 at pH 6.0 (use NMR model)
分子名称: Uncharacterized protein UU089.1
著者Hsu, M.F, Ko, T.P, Huang, K.F, Chen, Y.R, Huang, J.S, Hsu, S.T.D.
登録日2023-08-28
公開日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure, dynamics, and stability of the smallest and most complex 7 1 protein knot.
J.Biol.Chem., 300, 2023
5L0T
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BU of 5l0t by Molmil
human POGLUT1 in complex with EGF(+) and UDP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Li, Z, Rini, J.M.
登録日2016-07-28
公開日2017-08-09
最終更新日2021-03-24
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Structural basis of Notch O-glucosylation and O-xylosylation by mammalian protein-O-glucosyltransferase 1 (POGLUT1).
Nat Commun, 8, 2017
6OY4
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Crystal structure of complex between recombinant Der p 2.0103 and Fab fragment of 7A1
分子名称: Der p 2 variant 3, Fab fragment of IgG, HEAVY CHAIN, ...
著者Kapingidza, A.B, Offermann, L.R, Glesner, J, Wunschmann, S, Vailes, L.D, Chapman, M.D.C, Pomes, A, Chruszcz, M.
登録日2019-05-14
公開日2019-08-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A Human IgE Antibody Binding Site on Der p 2 for the Design of a Recombinant Allergen for Immunotherapy.
J Immunol., 203, 2019
6XYR
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BU of 6xyr by Molmil
Structure of the T4Lnano fusion protein
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Benoit, R.M, Bierig, T, Collu, C, Engilberge, S, Olieric, V.
登録日2020-01-31
公開日2020-12-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.079 Å)
主引用文献Chimeric single alpha-helical domains as rigid fusion protein connections for protein nanotechnology and structural biology.
Structure, 30, 2022
5L0U
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human POGLUT1 in complex with EGF(+) and UDP-phosphono-glucose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, EGF(+), ...
著者Li, Z, Rini, J.M.
登録日2016-07-28
公開日2017-08-09
最終更新日2021-03-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of Notch O-glucosylation and O-xylosylation by mammalian protein-O-glucosyltransferase 1 (POGLUT1).
Nat Commun, 8, 2017
5GSF
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BU of 5gsf by Molmil
Structure of roseltide rT1
分子名称: roseltide rT1
著者Xiao, T, Tam, J.P.
登録日2016-08-16
公開日2017-01-25
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Identification and Characterization of Roseltide, a Knottin-type Neutrophil Elastase Inhibitor Derived from Hibiscus sabdariffa.
Sci Rep, 6, 2016
5L0V
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human POGLUT1 in complex with 2F-glucose modified EGF(+) and UDP
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-2-fluoro-beta-D-glucopyranose, ...
著者Li, Z, Rini, J.M.
登録日2016-07-28
公開日2017-08-09
最終更新日2021-03-24
実験手法X-RAY DIFFRACTION (1.305 Å)
主引用文献Structural basis of Notch O-glucosylation and O-xylosylation by mammalian protein-O-glucosyltransferase 1 (POGLUT1).
Nat Commun, 8, 2017
5L0S
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human POGLUT1 in complex with Factor VII EGF1 and UDP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Li, Z, Rini, J.M.
登録日2016-07-28
公開日2017-08-09
最終更新日2021-03-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural basis of Notch O-glucosylation and O-xylosylation by mammalian protein-O-glucosyltransferase 1 (POGLUT1).
Nat Commun, 8, 2017
6BVB
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Crystal structure of HIF-2alpha-pVHL-elongin B-elongin C
分子名称: Elongin-B, Elongin-C, Hypoxia-Inducible Factor 2 alpha, ...
著者Tarade, D, Ohh, M, Lee, J.E.
登録日2017-12-12
公開日2018-08-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献HIF-2 alpha-pVHL complex reveals broad genotype-phenotype correlations in HIF-2 alpha-driven disease.
Nat Commun, 9, 2018
2ZJG
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Crystal structural of mouse kynurenine aminotransferase III
分子名称: GLYCEROL, Kynurenine-oxoglutarate transaminase 3
著者Han, Q, Cai, T, Tagle, D.A, Robinson, H, Li, J.
登録日2008-03-07
公開日2009-01-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and functional characterization of mouse kynurenine aminotransferase III
To be Published
8TN3
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Structure of S. hygroscopicus aminotransferase MppQ complexed with pyridoxamine 5'-phosphate (PMP)
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, PLP-dependent aminotransferase MppQ
著者Silvaggi, N.R, Vuksanovic, N.
登録日2023-08-01
公開日2023-11-22
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural and Biochemical Characterization of MppQ, an L-Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus.
Biochemistry, 62, 2023
8TN2
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Structure of S. hygroscopicus aminotransferase MppQ complexed with pyridoxal-5'-phosphate (PLP)
分子名称: PLP-dependent aminotransferase MppQ
著者Silvaggi, N.R, Vuksanovic, N.
登録日2023-08-01
公開日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural and Biochemical Characterization of MppQ, an L-Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus.
Biochemistry, 62, 2023

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