PDB: 98546 件ウェブページステータス検索Chemie searchBIRD

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7TI9	Crystal structure of the ubiquitin-like domain 1 (Ubl1) of Nsp3 from SARS-CoV-2, form 2 分子名称: CHLORIDE ION, GLYCEROL, Papain-like protease nsp3 著者 Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2022-01-13 公開日 2022-01-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.73 Å) 主引用文献 Crystal structure of the ubiquitin-like domain 1 (Ubl1) of Nsp3 from SARS-CoV-2, form 2 To Be Published
7BOH	Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement) 分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ... 著者 Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S. 登録日 2021-01-25 公開日 2021-12-08 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.82 Å) 主引用文献 A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit. Sci Adv, 7, 2021
7BOE	Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement) 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Lopez-Alonso, J, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.R. 登録日 2021-01-25 公開日 2021-12-08 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit. Sci Adv, 7, 2021
5U18	Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with the Geneticin 分子名称: GENETICIN, N-3'' methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 Bury, P, Huang, F, Leadlay, P, Dias, M.V.B. 登録日 2016-11-28 公開日 2017-11-01 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.195 Å) 主引用文献 Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis. ACS Chem. Biol., 12, 2017
5U1E	Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with the kanamycin B 分子名称: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, Putative gentamicin methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 Bury, P, Huang, F, Leadlay, P, Dias, M.V.B. 登録日 2016-11-28 公開日 2017-11-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.213 Å) 主引用文献 Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis. ACS Chem. Biol., 12, 2017
5UAW	Structure of apo human PYCR-1 crystallized in space group P21212 分子名称: Pyrroline-5-carboxylate reductase 1, mitochondrial, SULFATE ION 著者 Tanner, J.J. 登録日 2016-12-20 公開日 2017-03-15 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Resolving the cofactor-binding site in the proline biosynthetic enzyme human pyrroline-5-carboxylate reductase 1. J. Biol. Chem., 292, 2017
6XK1	Biuret Hydrolase (BiuH) from Rhodococcus sp. Mel C169S Apo form 分子名称: Biuret hydrolase 著者 Tassoulas, L.T, Elias, M.H, Wackett, L.P. 登録日 2020-06-25 公開日 2020-11-18 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Discovery of an ultraspecific triuret hydrolase (TrtA) establishes the triuret biodegradation pathway. J.Biol.Chem., 296, 2020
3F8K	Crystal structure of protein acetyltransferase (PAT) from Sulfolobus solfataricus 分子名称: COENZYME A, Protein acetyltransferase 著者 Brent, M.M. 登録日 2008-11-12 公開日 2009-05-26 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Structure and Biochemical Characterization of Protein Acetyltransferase from Sulfolobus solfataricus. J.Biol.Chem., 284, 2009
6H6K	The structure of the FKR mutant of the archaeal translation initiation factor 2 gamma subunit in complex with GDPCP, obtained in the absence of magnesium salts in the crystallization solution. 分子名称: 1,2-ETHANEDIOL, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, SODIUM ION, ... 著者 Nikonov, O, Kravchenko, O, Nevskaya, N, Stolboushkina, E, Gabdulkhakov, A, Garber, M, Nikonov, S. 登録日 2018-07-27 公開日 2019-04-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The third structural switch in the archaeal translation initiation factor 2 (aIF2) molecule and its possible role in the initiation of GTP hydrolysis and the removal of aIF2 from the ribosome. Acta Crystallogr D Struct Biol, 75, 2019
5TYQ	Crystal structure of a holoenzyme methyltransferase involved in the biosynthesis of gentamicin 分子名称: MAGNESIUM ION, Putative gentamicin methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 Bury, P, Huang, F, Leadlay, P, Dias, M.V.B. 登録日 2016-11-21 公開日 2017-11-01 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.163 Å) 主引用文献 Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis. ACS Chem. Biol., 12, 2017
5U0N	Crystal structure of a methyltransferase in complex with the substrate involved in the biosynthesis of gentamicin 分子名称: (1R,2S,3S,4R,6S)-4,6-diamino-3-[(3-amino-3-deoxy-alpha-D-xylopyranosyl)oxy]-2-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-glucopyranoside, MAGNESIUM ION, Putative gentamicin methyltransferase, ... 著者 Bury, P, Huang, F, Li, S, Sun, Y, Leadlay, P, Dias, M.V.B. 登録日 2016-11-25 公開日 2017-11-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.115 Å) 主引用文献 Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis. ACS Chem. Biol., 12, 2017
5U4T	Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, IODIDE ION, Putative gentamicin methyltransferase, ... 著者 Bury, P, Huang, F, Leadlay, P, Dias, M.V.B. 登録日 2016-12-06 公開日 2017-11-01 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.086 Å) 主引用文献 Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis. ACS Chem. Biol., 12, 2017
6Z46	Structure of the S. acidocaldarius 20S proteasome (Saci0613/Saci0662) 分子名称: Proteasome subunit alpha, Proteasome subunit beta 著者 Robinson, N.P, Bray, S.M. 登録日 2020-05-22 公開日 2020-08-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.698 Å) 主引用文献 The proteasome controls ESCRT-III-mediated cell division in an archaeon. Science, 369, 2020
6HE5	20S core particle of PAN-proteasomes 分子名称: Proteasome subunit alpha, Proteasome subunit beta, Proteasome-activating nucleotidase 著者 Majumder, P, Rudack, T, Beck, F, Baumeister, W. 登録日 2018-08-20 公開日 2018-12-26 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.12 Å) 主引用文献 Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6KIV	Cryo-EM structure of human MLL1-ubNCP complex (4.0 angstrom) 分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ... 著者 Huang, J, Xue, H, Yao, T. 登録日 2019-07-20 公開日 2019-09-11 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural basis of nucleosome recognition and modification by MLL methyltransferases. Nature, 573, 2019
5V0S	Crystal structure of the ACT domain of prephenate dehydrogenase tyrA from Bacillus anthracis 分子名称: CALCIUM ION, Prephenate dehydrogenase, SULFATE ION 著者 Shabalin, I.G, Hou, J, Cymborowski, M.T, Otwinowski, Z, Kwon, K, Christendat, D, Gritsunov, A, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2017-02-28 公開日 2017-03-08 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Structural and biochemical analysis of Bacillus anthracis prephenate dehydrogenase reveals an unusual mode of inhibition by tyrosine via the ACT domain. Febs J., 287, 2020
6HH0	Yeast V-ATPase transmembrane helix 7 NMR structure in DPC micelles 分子名称: V-type proton ATPase subunit a, vacuolar isoform 著者 Zangger, K, Hohlweg, W, Wagner, G. 登録日 2018-08-24 公開日 2018-09-12 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 A cation-pi interaction in a transmembrane helix of vacuolar ATPase retains the proton-transporting arginine in a hydrophobic environment. J. Biol. Chem., 293, 2018
3O1G	Cathepsin K covalently bound to a 2-cyano pyrimidine inhibitor with a benzyl P3 group. 分子名称: Cathepsin K, N-benzyl-3-(2-cyano-6-propylpyrimidin-4-yl)-N-[2-(dimethylamino)ethyl]-5-(trifluoromethyl)benzamide, SULFATE ION 著者 Fradera, X, van Zeeland, M, Uitdehaag, J.C.M. 登録日 2010-07-21 公開日 2010-10-06 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Optimisation of 2-cyano-pyrimidine inhibitors of cathepsin K: improving selectivity over hERG. Bioorg.Med.Chem.Lett., 20, 2010
5X1R	PpkA-294 apo form 分子名称: PpkA-294 著者 Li, P.P, Ran, T.T, Xu, D.Q, Wang, W.W. 登録日 2017-01-26 公開日 2018-01-31 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structures of the kinase domain of PpkA, a key regulatory component of T6SS, reveal a general inhibitory mechanism. Biochem.J., 475, 2018
3U28	Crystal structure of a Cbf5-Nop10-Gar1 complex from Saccharomyces cerevisiae 分子名称: H/ACA ribonucleoprotein complex subunit 1, H/ACA ribonucleoprotein complex subunit 3, H/ACA ribonucleoprotein complex subunit 4 著者 Ye, K, Li, S. 登録日 2011-10-02 公開日 2011-12-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Reconstitution and structural analysis of the yeast box H/ACA RNA-guided pseudouridine synthase Genes Dev., 25, 2011
5BKL	Crystallographic structure of the cubic crystal form of STMV (77.9 degree rotation) grown from NaCl 分子名称: CHLORIDE ION, Coat protein, MAGNESIUM ION, ... 著者 McPherson, A. 登録日 2021-03-20 公開日 2021-12-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.94 Å) 主引用文献 Structures of additional crystal forms of Satellite tobacco mosaic virus grown from a variety of salts. Acta Crystallogr.,Sect.F, 77, 2021
2JUA	Assignment, structure, and dynamics of de novo designed protein S836 分子名称: de novo protein S836 著者 Go, A, Kim, S, Baum, J.S, Hecht, M.H. 登録日 2007-08-16 公開日 2008-05-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structure and dynamics of de novo proteins from a designed superfamily of 4-helix bundles. Protein Sci., 17, 2008
2WWG	Plasmodium falciparum thymidylate kinase in complex with dGMP and ADP 分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ... 著者 Whittingham, J.L, Carrero-Lerida, J, Brannigan, J.A, Ruiz-Perez, L.M, Silva, A.P, Fogg, M.J, Wilkinson, A.J, Gilbert, I.H, Wilson, K.S, Gonzalez-Pacanowska, D. 登録日 2009-10-23 公開日 2010-04-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Basis for the Efficient Phosphorylation of Aztmp and Dgmp by Plasmodium Falciparum Type I Thymidylate Kinase. Biochem.J., 428, 2010
3ZKI	BACE2 MUTANT STRUCTURE WITH LIGAND 分子名称: 5-(2,2,2-Trifluoro-ethoxy)-pyridine-2-carboxylic acid [3-((S)-2-amino-1,4-dimethyl-6-oxo-1,4,5,6-tetrahydro-pyrimidin-4-yl)-phenyl]-amide, BETA-SECRETASE 2 著者 Banner, D.W, Kuglstatter, A, Benz, J, Stihle, M, Ruf, A. 登録日 2013-01-23 公開日 2013-05-29 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Mapping the Conformational Space Accessible to Bace2 Using Surface Mutants and Co-Crystals with Fab-Fragments, Fynomers, and Xaperones Acta Crystallogr.,Sect.D, 69, 2013
3BH0	ATPase Domain of G40P 分子名称: DNAB-LIKE REPLICATIVE HELICASE 著者 Wang, G, Klein, M.G, Tokonzaba, E, Zhang, Y, Holden, L.G, Chen, X.S. 登録日 2007-11-27 公開日 2007-12-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The structure of a DnaB-family replicative helicase and its interactions with primase. Nat.Struct.Mol.Biol., 15, 2008

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