PDB: 47113 件ウェブページステータス検索Chemie searchBIRD

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2DZZ	Crystal structure of N392V mutant of yeast bleomycin hydrolase 分子名称: Cysteine proteinase 1 著者 O'Farrell, P.A, Joshua-Tor, L. 登録日 2006-09-30 公開日 2007-08-14 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Mutagenesis and crystallographic studies of the catalytic residues of the papain family protease bleomycin hydrolase: new insights into active-site structure Biochem.J., 401, 2007
5FW5	Crystal structure of human G3BP1 in complex with Semliki Forest Virus nsP3-25 comprising two FGDF motives 分子名称: ACETATE ION, GLYCEROL, NON-STRUCTURAL PROTEIN 3, ... 著者 Schulte, T, Liu, L, Panas, M.D, Thaa, B, Goette, B, Achour, A, McInerney, G.M. 登録日 2016-02-12 公開日 2016-07-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Combined structural, biochemical and cellular evidence demonstrates that both FGDF motifs in alphavirus nsP3 are required for efficient replication. Open Biol, 6, 2016
5SXV	X-ray structure of 2-bromoethanol bound to a pentameric ligand gated ion channel (ELIC) in a resting state 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-BROMOETHANOL, Cys-loop ligand-gated ion channel 著者 Chen, Q, Kinde, M, Cohen, A, Xu, Y, Tang, P. 登録日 2016-08-10 公開日 2017-06-21 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural Basis of Alcohol Inhibition of the Pentameric Ligand-Gated Ion Channel ELIC. Structure, 25, 2017
4AM9	CRYSTAL STRUCTURE OF THE YERSINIA ENTEROCOLITICA TYPE III SECRETION CHAPERONE SYCD IN COMPLEX WITH A PEPTIDE OF THE TRANSLOCATOR YOPD 分子名称: (R,R)-2,3-BUTANEDIOL, CHAPERONE SYCD, SULFATE ION, ... 著者 Schreiner, M, Niemann, H.H. 登録日 2012-03-08 公開日 2012-05-30 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of the Yersinia Enterocolitica Type III Secretion Chaperone Sycd in Complex with a Peptide of the Minor Translocator Yopd Bmc Struct.Biol., 12, 2012
5FOI	Crystal structure of mycinamicin VIII C21 methyl hydroxylase MycCI from Micromonospora griseorubida bound to mycinamicin VIII 分子名称: GLYCEROL, MYCINAMICIN VIII C21 METHYL HYDROXYLASE, Mycinamicin VIII, ... 著者 Demars, M, Sheng, F, Podust, L.M, Sherman, D.H. 登録日 2015-11-22 公開日 2016-07-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Biochemical and Structural Characterization of Mycci, a Versatile P450 Biocatalyst from the Mycinamicin Biosynthetic Pathway. Acs Chem.Biol., 11, 2016
8XAS	Crystal structure of AtARR1-DBD in complex with a DNA fragment 分子名称: DNA (50-MER), Two-component response regulator ARR1 著者 Li, J.X, Zhou, C.M, zhang, P, Wang, J.W. 登録日 2023-12-05 公開日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.346 Å) 主引用文献 The structure of B-ARR reveals the molecular basis of transcriptional activation by cytokinin. Proc.Natl.Acad.Sci.USA, 121, 2024
4A05	Structure of the catalytic core domain of the cellobiohydrolase, Cel6A, from Chaetomium thermophilum 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CELLOBIOHYDROLASE FAMILY 6, LITHIUM ION, ... 著者 Thompson, A.J, Wilson, K.S, Davies, G.J. 登録日 2011-09-08 公開日 2012-07-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of the Catalytic Core Module of the Chaetomium Thermophilum Family Gh6 Cellobiohydrolase Cel6A. Acta Crystallogr.,Sect.D, 68, 2012
8XAT	Crystal structure of AtARR1(RD-DBD) 分子名称: Two-component response regulator ARR1 著者 Li, J.X, Zhou, C.M, Zhang, P, Wang, J.W. 登録日 2023-12-05 公開日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.205 Å) 主引用文献 The structure of B-ARR reveals the molecular basis of transcriptional activation by cytokinin. Proc.Natl.Acad.Sci.USA, 121, 2024
4AOP	SULFITE REDUCTASE HEMOPROTEIN PARTIALLY PHOTOREDUCED WITH PROFLAVINE EDTA, PHOSPHATE PARTIALLY BOUND 分子名称: IRON/SULFUR CLUSTER, PHOSPHATE ION, POTASSIUM ION, ... 著者 Crane, B.R, Getzoff, E.D. 登録日 1997-07-09 公開日 1998-01-14 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structures of the siroheme- and Fe4S4-containing active center of sulfite reductase in different states of oxidation: heme activation via reduction-gated exogenous ligand exchange. Biochemistry, 36, 1997
2E03	Crystal structure of NQ67E mutant of yeast bleomycin hydrolase 分子名称: Cysteine proteinase 1 著者 O'Farrell, P.A, Joshua-Tor, L. 登録日 2006-10-01 公開日 2007-08-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Mutagenesis and crystallographic studies of the catalytic residues of the papain family protease bleomycin hydrolase: new insights into active-site structure Biochem.J., 401, 2007
5FZA	Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment 2-piperidin-4-yloxy-5-(trifluoromethyl)pyridine (N10072a) (ligand modelled based on PANDDA event map) 分子名称: 1,2-ETHANEDIOL, 2-piperidin-4-yloxy-5-(trifluoromethyl)pyridine, CHLORIDE ION, ... 著者 Nowak, R, Krojer, T, Pearce, N, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, von Delft, F, Brennan, P.E, Oppermann, U. 登録日 2016-03-12 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.099 Å) 主引用文献 Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with 3D Fragment 2-Piperidin-4-Yloxy-5-(Trifluoromethyl)Pyridine (N10072A) (Ligand Modelled Based on Pandda Event Map) To be Published
2E2M	Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfinic acid form) 分子名称: Probable peroxiredoxin 著者 Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T. 登録日 2006-11-14 公開日 2007-11-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate Proc.Natl.Acad.Sci.Usa, 105, 2008
5FYY	Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment 3-pyridin-3-ylaniline (N05798a) (ligand modelled based on PANDDA event map) 分子名称: 1,2-ETHANEDIOL, 3-(pyridin-3-yl)aniline, CHLORIDE ION, ... 著者 Nowak, R, Krojer, T, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, Pearce, N, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, von Delft, F, Brennan, P.E, Oppermann, U. 登録日 2016-03-10 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with N05798A To be Published
5FWE	JMJD2A COMPLEXED WITH NI(II), NOG AND HISTONE H4(1-15)R3me2s PEPTIDE 分子名称: CHLORIDE ION, GLYCEROL, LYSINE-SPECIFIC DEMETHYLASE 4A, ... 著者 Chowdhury, R, Walport, L.J, Schofield, C.J. 登録日 2016-02-15 公開日 2016-04-06 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Arginine Demethylation is Catalysed by a Subset of Jmjc Histone Lysine Demethylases. Nat.Commun., 7, 2016
1XVF	soluble methane monooxygenase hydroxylase: chloropropanol soaked structure 分子名称: 3-CHLOROPROPANOL, FE (III) ION, Methane monooxygenase component A alpha chain, ... 著者 Sazinsky, M.H, Lippard, S.J. 登録日 2004-10-27 公開日 2005-05-03 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Product Bound Structures of the Soluble Methane Monooxygenase Hydroxylase from Methylococcus capsulatus (Bath): Protein Motion in the Alpha-Subunit J.Am.Chem.Soc., 127, 2005
4AAS	ATP-triggered molecular mechanics of the chaperonin GroEL 分子名称: 60 KDA CHAPERONIN, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Clare, D.K, Vasishtan, D, Stagg, S, Quispe, J, Farr, G.W, Topf, M, Horwich, A.L, Saibil, H.R. 登録日 2011-12-05 公開日 2012-12-12 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (8.5 Å) 主引用文献 ATP-Triggered Conformational Changes Delineate Substrate-Binding and -Folding Mechanics of the Groel Chaperonin. Cell(Cambridge,Mass.), 149, 2012
4ACS	Crystal structure of mutant GST A2-2 with enhanced catalytic efficiency with azathioprine 分子名称: GLUTATHIONE, GLUTATHIONE S-TRANSFERASE A2 著者 Zhang, W, Moden, O, Tars, K, Mannervik, B. 登録日 2011-12-19 公開日 2011-12-28 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure-based redesign of GST A2-2 for enhanced catalytic efficiency with azathioprine. Chem.Biol., 19, 2012
2E5D	Crystal structure of Human NMPRTase complexed with nicotinamide 分子名称: NICOTINAMIDE, Nicotinamide phosphoribosyltransferase 著者 Takahashi, R, Nakamura, S, Kobayashi, Y, Ohkubo, T. 登録日 2006-12-20 公開日 2007-12-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and reaction mechanism of human nicotinamide phosphoribosyltransferase J.Biochem., 147, 2010
2E5U	C-terminal domain of Epsilon subunit of F1F0-ATP synthase from the Thermophilic Bacillus PS3 分子名称: ATP synthase epsilon chain 著者 Yagi, H, Akutsu, H. 登録日 2006-12-25 公開日 2007-07-10 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1 Proc.Natl.Acad.Sci.Usa, 104, 2007
3X03	Crystal structure of PIP4KIIBETA complex with AMPPNP 分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta 著者 Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T. 登録日 2014-10-09 公開日 2015-10-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis Mol.Cell, 61, 2016
8Y6B	Structure of human LGI1-ADAM22 complex in space group P212121 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 22, ... 著者 Liu, H, Xu, F. 登録日 2024-02-02 公開日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.49 Å) 主引用文献 Structure of human LGI1-ADAM22 complex in space group P212121 To Be Published
5CMR	Crystal Structure of Linker-Mediated Zn-bound Human H-Ferritin variant 122H-delta C-star 分子名称: Ferritin heavy chain, N,N'-dihydroxybenzene-1,4-dicarboxamide, SODIUM ION, ... 著者 Sontz, P.A, Bailey, J.B, Ahn, S, Tezcan, F.A. 登録日 2015-07-17 公開日 2015-09-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.792 Å) 主引用文献 A Metal Organic Framework with Spherical Protein Nodes: Rational Chemical Design of 3D Protein Crystals. J.Am.Chem.Soc., 137, 2015
5FM0	Crystal structure of the 6-carboxyhexanoate-CoA ligase (BioW)from Bacillus subtilis (PtCl4 derivative) 分子名称: 6-CARBOXYHEXANOATE--COA LIGASE, MAGNESIUM ION, PIMELOYL-AMP, ... 著者 Moynie, L, Wang, M, Campopiano, D.J, Naismith, J.H. 登録日 2015-10-29 公開日 2016-11-16 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Using the pimeloyl-CoA synthetase adenylation fold to synthesize fatty acid thioesters. Nat. Chem. Biol., 13, 2017
3WZ8	Endothiapepsin in complex with Gewald reaction-derived inhibitor (8) 分子名称: DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, Endothiapepsin, ... 著者 Kuhnert, M, Steuber, H, Diederich, W.E. 登録日 2014-09-19 公開日 2015-08-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Tracing binding modes in hit-to-lead optimization: chameleon-like poses of aspartic protease inhibitors Angew.Chem.Int.Ed.Engl., 54, 2015
1XGB	ALPHA CONOTOXIN GI: 2-13;3-7 DISULFIDE BOND ISOMER NMR, 24 STRUCTURES 分子名称: ALPHA-CONOTOXIN GI 著者 Gehrmann, J, Alewood, P.F, Craik, D.J. 登録日 1998-01-18 公開日 1999-02-16 最終更新日 2022-03-02 実験手法 SOLUTION NMR 主引用文献 Structure determination of the three disulfide bond isomers of alpha-conotoxin GI: a model for the role of disulfide bonds in structural stability. J.Mol.Biol., 278, 1998

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