PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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4ABH	Fragments bound to bovine trypsin for the SAMPL challenge 分子名称: 1,2-ETHANEDIOL, 1-(3-PYRROLIDIN-1-YLPHENYL)METHANAMINE, CALCIUM ION, ... 著者 Newman, J, Peat, T.S. 登録日 2011-12-08 公開日 2012-02-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge. J.Comput.Aided Mol.Des., 26, 2012
1XL2	HIV-1 Protease in complex with pyrrolidinmethanamine 分子名称: CHLORIDE ION, GLYCEROL, N-BENZYL-2-(2,6-DIMETHYLPHENOXY)-N-[((3R,4S)-4-{[ISOBUTYL(PHENYLSULFONYL)AMINO]METHYL}PYRROLIDIN-3-YL)METHYL]ACETAMIDE, ... 著者 Boettcher, J, Specker, E, Heine, A, Klebe, G. 登録日 2004-09-30 公開日 2005-06-07 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 An Old Target Revisited: Two New Privileged Skeletons and an Unexpected Binding Mode For HIV-Protease Inhibitors Angew.Chem.Int.Ed.Engl., 44, 2005
5FMK	Bcl-xL with Bak BH3 complex 分子名称: BCL-2 HOMOLOGOUS ANTAGONIST/KILLER, BCL-XL, GLYCEROL 著者 Fairlie, W.D, Lee, E.F, Smith, B.J, Czabotar, P.E, Colman, P.M. 登録日 2015-11-06 公開日 2016-06-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.731 Å) 主引用文献 Physiological Restraint of Bak by Bcl-Xl is Essential for Cell Survival. Genes Dev., 30, 2016
5C9I	Structure of N-acylhomoserine lactone acylase MacQ shortened spacer mutant (delta202-208) in uncleaved form 分子名称: GLYCEROL, Protein related to penicillin acylase 著者 Yasutake, Y, Kusada, H, Kimura, N. 登録日 2015-06-27 公開日 2016-06-29 最終更新日 2017-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Bifunctional quorum-quenching and antibiotic-acylase MacQ forms a 170-kDa capsule-shaped molecule containing spacer polypeptides Sci Rep, 7, 2017
2AXK	Solution structure of discrepin, a scorpion venom toxin blocking K+ channels. 分子名称: discrepin 著者 Prochnicka-Chalufour, A, Corzo, G, Satake, H, Martin-Eauclaire, M.-F, Murgia, A.R, Prestipino, G, D'Suze, G, Possani, L.D, Delepierre, M. 登録日 2005-09-05 公開日 2006-06-20 最終更新日 2019-12-25 実験手法 SOLUTION NMR 主引用文献 Solution structure of discrepin, a new K+-channel blocking peptide from the alpha-KTx15 subfamily. Biochemistry, 45, 2006
5FYV	Crystal structure of the catalytic domain of human JARID1B in complex with oxaloacetate 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Nowak, R, Kopec, J, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U. 登録日 2016-03-10 公開日 2017-03-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Oxaloacetate To be Published
1XK1	Crystal Structures of the G139A, G139A-NO and G143H Mutants of Human Heme Oxygenase-1 分子名称: Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE 著者 Lad, L, Ortiz de Montellano, P.R, Poulos, T.L. 登録日 2004-09-26 公開日 2005-12-13 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Crystal structures of the G139A, G139A-NO and G143H mutants of human heme oxygenase-1. A finely tuned hydrogen-bonding network controls oxygenase versus peroxidase activity. J.Biol.Inorg.Chem., 10, 2005
2B24	Crystal structure of naphthalene 1,2-dioxygenase from Rhodococcus sp. bound to indole 分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, INDOLE, ... 著者 Gakhar, L, Malik, Z.A, Allen, C.C, Lipscomb, D.A, Larkin, M.J, Ramaswamy, S. 登録日 2005-09-16 公開日 2005-10-04 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure and Increased Thermostability of Rhodococcus sp. Naphthalene 1,2-Dioxygenase. J.Bacteriol., 187, 2005
1XN8	Solution Structure of Bacillus subtilis Protein yqbG: The Northeast Structural Genomics Consortium Target SR215 分子名称: Hypothetical protein yqbG 著者 Liu, G, Ma, L, Shen, Y, Acton, T, Atreya, H.S, Xiao, R, Joachimiak, A, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG) 登録日 2004-10-04 公開日 2004-12-14 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 NMR data collection and analysis protocol for high-throughput protein structure determination. Proc.Natl.Acad.Sci.Usa, 102, 2005
5CE8	Crystal structure of branched-chain aminotransferase from thermophilic archaea Thermoproteus uzoniensis 分子名称: Branched-chain amino acid aminotransferase, DI(HYDROXYETHYL)ETHER, PYRIDOXAL-5'-PHOSPHATE 著者 Boyko, K.M, Nikolaeva, A.Y, Stekhanova, T.N, Mardanov, A.V, Rakitin, A.L, Ravin, N.V, Popov, V.O. 登録日 2015-07-06 公開日 2016-02-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 First structure of archaeal branched-chain amino acid aminotransferase from Thermoproteus uzoniensis specific for L-amino acids and R-amines. Extremophiles, 20, 2016
4AJ5	Crystal structure of the Ska core complex 分子名称: SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1, SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2, SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 3 著者 Jeyaprakash, A.A, Santamaria, A, Jayachandran, U, Chan, Y.W, Benda, C, Nigg, E.A, Conti, E. 登録日 2012-02-15 公開日 2012-05-23 実験手法 X-RAY DIFFRACTION (3.32 Å) 主引用文献 Structural and Functional Organization of the Ska Complex, a Key Component of the Kinetochore-Microtubule Interface. Mol.Cell, 46, 2012
1XPO	Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic bicyclomycin 分子名称: 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3', BICYCLOMYCIN, MAGNESIUM ION, ... 著者 Skordalakes, E, Brogan, A.P, Park, B.S, Kohn, H, Berger, J.M. 登録日 2004-10-09 公開日 2005-02-08 最終更新日 2018-01-31 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structural mechanism of inhibition of the rho transcription termination factor by the antibiotic bicyclomycin Structure, 13, 2005
5FT8	Crystal structure of the complex between the cysteine desulfurase CsdA and the sulfur-acceptor CsdE in the persulfurated state at 2.50 Angstroem resolution 分子名称: Cysteine desulfurase CsdA, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Fernandez, F.J, Arda, A, Lopez-Estepa, M, Aranda, J, Penya-Soler, E, Garces, F, Round, A, Campos-Oliva, R, Bruix, M, Coll, M, Tunon, I, Jimenez-Barbero, J, Vega, M.C. 登録日 2016-01-11 公開日 2016-11-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mechanism of Sulfur Transfer Across Protein-Protein Interfaces: The Cysteine Desulfurase Model System Acs Catalysis, 6, 2016
1XLT	Crystal structure of Transhydrogenase [(domain I)2:domain III] heterotrimer complex 分子名称: NAD(P) transhydrogenase subunit alpha part 1, NAD(P) transhydrogenase subunit beta, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Sundaresan, V, Chartron, J, Yamaguchi, M, Stout, C.D. 登録日 2004-09-30 公開日 2005-04-05 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Conformational Diversity in NAD(H) and Transhydrogenase Nicotinamide Nucleotide Binding Domains J.Mol.Biol., 346, 2005
5FYI	Crystal structure of human JMJD2A in complex with pyruvate 分子名称: (2-hydroxyethoxy)acetaldehyde, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ... 著者 Nowak, R, Kopec, J, Johansson, C, Szykowska, A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Oppermann, U. 登録日 2016-03-07 公開日 2016-03-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.096 Å) 主引用文献 Crystal Structure of Human Jmjd2A in Complex with Pyruvate To be Published
5B8A	Crystal structure of oxidized chimeric EcAhpC1-186-YFSKHN 分子名称: Alkyl hydroperoxide reductase subunit C,Peroxiredoxin-2, GLYCEROL, SULFATE ION 著者 Kamariah, N, Sek, M.F, Eisenhaber, B, Eisenhaber, F, Gruber, G. 登録日 2016-06-14 公開日 2017-02-01 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins. Sci Rep, 6, 2016
5FZ6	Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment N05859b (ligand modelled based on PANDDA event map, SGC - Diamond I04-1 fragment screening) 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-CARBOXYPIPERIDINE, ... 著者 Nowak, R, Krojer, T, Johansson, C, Kupinska, K, Szykowska, A, Pearce, N, Talon, R, Collins, P, Gileadi, C, Strain-Damerell, C, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, von Delft, F, Brennan, P.E, Oppermann, U. 登録日 2016-03-11 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Maybridge Fragment N05859B (Ligand Modelled Based on Pandda Event Map, Sgc - Diamond I04-1 Fragment Screening) To be Published
5FY5	Crystal structure of the catalytic domain of human JARID1B in complex with fumarate 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FUMARIC ACID, ... 著者 Nowak, R, Srikannathasan, V, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U. 登録日 2016-03-04 公開日 2017-03-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Fumarate To be Published
5FYH	Crystal structure of human JMJD2A in complex with fumarate 分子名称: 1,2-ETHANEDIOL, FUMARIC ACID, LYSINE-SPECIFIC DEMETHYLASE 4A, ... 著者 Nowak, R, Kopec, J, Johansson, C, Szykowska, A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Oppermann, U. 登録日 2016-03-07 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.348 Å) 主引用文献 Crystal Structure of Human Jmjd2A in Complex with Fumarate To be Published
5FYC	Crystal structure of human JMJD2A in complex with succinate 分子名称: 1,2-ETHANEDIOL, FUMARIC ACID, LYSINE-SPECIFIC DEMETHYLASE 4A, ... 著者 Nowak, R, Kopec, J, Johansson, C, Szykowska, A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Oppermann, U. 登録日 2016-03-07 公開日 2016-03-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.261 Å) 主引用文献 Crystal Structure of Human Jmjd2A in Complex with Succinate To be Published
5FY9	Crystal structure of the catalytic domain of human JARID1B in complex with pyruvate 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, LYSINE-SPECIFIC DEMETHYLASE 5B, ... 著者 Nowak, R, Srikannathasan, V, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U. 登録日 2016-03-04 公開日 2017-03-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Pyruvate To be Published
5FY4	Crystal structure of the catalytic domain of human JARID1B in complex with succinate 分子名称: 1,2-ETHANEDIOL, FUMARIC ACID, LYSINE-SPECIFIC DEMETHYLASE 5B, ... 著者 Nowak, R, Srikannathasan, V, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U. 登録日 2016-03-04 公開日 2017-03-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Succinate To be Published
5FUN	Crystal structure of human JARID1B in complex with GSK467 分子名称: 1,2-ETHANEDIOL, 2-[(1-benzyl-1H-pyrazol-4-yl)oxy]pyrido[3,4-d]pyrimidin-4(3H)-one, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Srikannathasan, V, Johansson, C, Gileadi, C, Kopec, J, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Brennan, P, Oppermann, U. 登録日 2016-01-28 公開日 2016-04-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Analysis of Human Kdm5B Guides Histone Demethylase Inhibitor Development. Nat.Chem.Biol., 12, 2016
4APW	Alp12 filament structure 分子名称: ALP12 著者 Popp, D, Narita, A, Lee, L.J, Ghoshdastider, U, Xue, B, Srinivasan, R, Balasubramanian, M.K, Tanaka, T, Robinson, R.C. 登録日 2012-04-06 公開日 2012-05-16 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (19.700001 Å) 主引用文献 Novel Actin-Like Filament Structure from Clostridium Tetani. J.Biol.Chem., 287, 2012
5BQQ	Human insulin with intra-chain chemical crosslink between modified B27 and B30 分子名称: CHLORIDE ION, Insulin, PHENOL, ... 著者 Brzozowski, A.M, Turkenburg, J.P, Jiracek, J, Zakova, L. 登録日 2015-05-29 公開日 2016-02-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Rational steering of insulin binding specificity by intra-chain chemical crosslinking. Sci Rep, 6, 2016

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