PDB: 46188 件ウェブページステータス検索Chemie searchBIRD

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2DU6	Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase E418N/E420N mutant complexed with tRNAAmber and O-phosphoserine ("amber complex") 分子名称: O-phosphoseryl-tRNA synthetase, PHOSPHOSERINE, tRNA 著者 Fukunaga, R. 登録日 2006-07-20 公開日 2007-03-13 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural insights into the first step of RNA-dependent cysteine biosynthesis in archaea. Nat.Struct.Mol.Biol., 14, 2007
2DR7	Complex structure of CCA-adding enzyme with tRNAminiDC 分子名称: CCA-adding enzyme, SULFATE ION, tRNA (33-MER) 著者 Tomita, K, Ishitani, R, Fukai, S, Nureki, O. 登録日 2006-06-08 公開日 2006-11-14 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
2DRB	Complex structure of CCA-adding enzyme with tRNAminiCCA 分子名称: CCA-adding enzyme, SULFATE ION, tRNA (35-MER) 著者 Tomita, K, Ishitani, R, Fukai, S, Nureki, O. 登録日 2006-06-08 公開日 2006-11-14 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
2GU6	E. coli methionine aminopeptidase in complex with NleP, 1: 2, di-metalated 分子名称: (1-AMINO-PENTYL)-PHOSPHONIC ACID, MANGANESE (II) ION, Methionine aminopeptidase, ... 著者 Ye, Q.Z. 登録日 2006-04-28 公開日 2006-07-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis of catalysis by monometalated methionine aminopeptidase. Proc.Natl.Acad.Sci.Usa, 103, 2006
2H6T	Secreted aspartic proteinase (Sap) 3 from Candida albicans complexed with pepstatin A 分子名称: Candidapepsin-3, ZINC ION, pepstatin A 著者 Ruge, E, Borelli, C, Maskos, K, Huber, R. 登録日 2006-06-01 公開日 2007-06-12 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The crystal structure of the secreted aspartic proteinase 3 from Candida albicans and its complex with pepstatin A. Proteins, 68, 2007
2H6S	Secreted aspartic proteinase (Sap) 3 from Candida albicans 分子名称: Candidapepsin-3, ZINC ION 著者 Ruge, E, Borelli, C, Maskos, K, Huber, R. 登録日 2006-06-01 公開日 2007-06-12 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The crystal structure of the secreted aspartic proteinase 3 from Candida albicans and its complex with pepstatin A. Proteins, 68, 2007
2GIY	Crystal Structure of the C-terminal domain of the HSV-1 gE ectodomain 分子名称: Glycoprotein E 著者 Sprague, E.R, Wang, C, Baker, D, Bjorkman, P.J. 登録日 2006-03-29 公開日 2006-05-30 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Crystal Structure of the HSV-1 Fc Receptor Bound to Fc Reveals a Mechanism for Antibody Bipolar Bridging. Plos Biol., 4, 2006
5HZG	The crystal structure of the strigolactone-induced AtD14-D3-ASK1 complex 分子名称: (2Z)-2-methylbut-2-ene-1,4-diol, F-box/LRR-repeat MAX2 homolog, SKP1-like protein 1A, ... 著者 Yao, R.F, Ming, Z.H, Yan, L.M, Rao, Z.H, Lou, Z.Y, Xie, D.X. 登録日 2016-02-02 公開日 2016-08-03 最終更新日 2016-08-31 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 DWARF14 is a non-canonical hormone receptor for strigolactone Nature, 536, 2016
2Z4Q	Crystal structure of a murine antibody FAB 528 分子名称: CADMIUM ION, CHLORIDE ION, anti egfr antibody fab, ... 著者 Nakanishi, T, Tsumoto, K, Asano, R, Kondo, H, Kumagai, I. 登録日 2007-06-22 公開日 2007-10-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Thermodynamic consequences of mutations in vernier zone residues of a humanized anti-human epidermal growth factor receptor murine antibody, 528 J.Biol.Chem., 283, 2008
4KHZ	Crystal structure of the maltose-binding protein/maltose transporter complex in an pre-translocation conformation bound to maltoheptaose 分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, Binding-protein-dependent transport systems inner membrane component, Maltose transport system permease protein MalF, ... 著者 Oldham, M.L, Chen, S, Chen, J. 登録日 2013-05-01 公開日 2013-10-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis for substrate specificity in the Escherichia coli maltose transport system. Proc.Natl.Acad.Sci.USA, 110, 2013
4KIW	Design and structural analysis of aromatic inhibitors of type II dehydroquinate dehydratase from Mycobacterium tuberculosis - compound 49e [5-[(3-nitrobenzyl)amino]benzene-1,3-dicarboxylic acid] 分子名称: 3-dehydroquinate dehydratase, 5-[(3-nitrobenzyl)amino]benzene-1,3-dicarboxylic acid 著者 Dias, M.V.B, Howard, N.G, Blundell, T.L, Abell, C. 登録日 2013-05-02 公開日 2014-05-14 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.57 Å) 主引用文献 Design and Structural Analysis of Aromatic Inhibitors of Type II Dehydroquinase from Mycobacterium tuberculosis. Chemmedchem, 10, 2015
8F2R	Human CCC complex 分子名称: COMM domain-containing protein 1, COMM domain-containing protein 10, COMM domain-containing protein 2, ... 著者 Healy, M.D, McNally, K.E, Butkovic, R, Chilton, M, Kato, K, Sacharz, J, McConville, C, Moody, E.R.R, Shaw, S, Planelles-Herrero, V.J, Kadapalakere, S.Y, Ross, J, Borucu, U, Palmer, C.S, Chen, K, Croll, T.I, Hall, R.J, Caruana, N.J, Ghai, R, Nguyen, T.H.D, Heesom, K.J, Saitoh, S, Berger, I, Berger-Schaffitzel, C, Williams, T.A, Stroud, D.A, Derivery, E, Collins, B.M, Cullen, P.J. 登録日 2022-11-08 公開日 2023-05-24 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.12 Å) 主引用文献 Structure of the endosomal Commander complex linked to Ritscher-Schinzel syndrome. Cell, 186, 2023
2Z6B	Crystal Structure Analysis of (gp27-gp5)3 conjugated with Fe(III) protoporphyrin 分子名称: 1-ETHYL-PYRROLIDINE-2,5-DIONE, Baseplate structural protein Gp27, Tail-associated lysozyme 著者 Koshiyama, T, Yokoi, N, Ueno, T, Kanamaru, S, Nagano, S, Shiro, Y, Arisaka, F, Watanabe, Y. 登録日 2007-07-28 公開日 2008-04-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Molecular design of heteroprotein assemblies providing a bionanocup as a chemical reactor. Small, 4, 2008
1RXS	E. coli uridine phosphorylase: 2'-deoxyuridine phosphate complex 分子名称: 2'-DEOXYURIDINE, META VANADATE, PHOSPHATE ION, ... 著者 Caradoc-Davies, T.T, Cutfield, S.M, Lamont, I.L, Cutfield, J.F. 登録日 2003-12-18 公開日 2004-04-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structures of escherichia coli uridine phosphorylase in two native and three complexed forms reveal basis of substrate specificity, induced conformational changes and influence of potassium J.Mol.Biol., 337, 2004
8F2U	Human CCC complex 分子名称: COMM domain-containing protein 1, COMM domain-containing protein 10, COMM domain-containing protein 2, ... 著者 Healy, M.D, McNally, K.E, Butkovic, R, Chilton, M, Kato, K, Sacharz, J, McConville, C, Moody, E.R.R, Shaw, S, Planelles-Herrero, V.J, Kadapalakere, S.Y, Ross, J, Borucu, U, Palmer, C.S, Chen, K, Croll, T.I, Hall, R.J, Caruana, N.J, Ghai, R, Nguyen, T.H.D, Heesom, K.J, Saitoh, S, Berger, I, Berger-Schaffitzel, C, Williams, T.A, Stroud, D.A, Derivery, E, Collins, B.M, Cullen, P.J. 登録日 2022-11-08 公開日 2023-05-24 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.53 Å) 主引用文献 Structure of the endosomal Commander complex linked to Ritscher-Schinzel syndrome. Cell, 186, 2023
4K7N	HUMAN PEROXIREDOXIN 5 with a fragment 分子名称: 4-METHYLCATECHOL, Peroxiredoxin-5, mitochondrial 著者 Guichou, J.F. 登録日 2013-04-17 公開日 2014-04-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Comparing Binding Modes of Analogous Fragments Using NMR in Fragment-Based Drug Design: Application to PRDX5 Plos One, 9, 2014
5HZW	Crystal structure of the orphan region of human endoglin/CD105 in complex with BMP9 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Growth/differentiation factor 2, Maltose-binding periplasmic protein,Endoglin, ... 著者 Bokhove, M, Saito, T, Jovine, L. 登録日 2016-02-03 公開日 2017-06-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (4.451 Å) 主引用文献 Structural Basis of the Human Endoglin-BMP9 Interaction: Insights into BMP Signaling and HHT1. Cell Rep, 19, 2017
3LXR	Shigella IpgB2 in complex with human RhoA and GDP (complex C) 分子名称: GUANOSINE-5'-DIPHOSPHATE, IpgB2, SULFATE ION, ... 著者 Klink, B.U, Barden, S, Heidler, T.V, Borchers, C, Ladwein, M, Stradal, T.E.B, Rottner, K, Heinz, D.W. 登録日 2010-02-25 公開日 2010-03-31 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Structure of Shigella IPGB2 in complex with human RhoA: Implications for the mechanism of bacterial GEF-mimicry J.Biol.Chem., 285, 2010
5HBY	RNA primer-template complex with 2-methylimidazole-activated monomer analogue-3 binding sites 分子名称: MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*C)-3'), [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid 著者 Zhang, W, Tam, C.P, Wang, J, Szostak, J.W. 登録日 2016-01-03 公開日 2016-12-07 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 Unusual Base-Pairing Interactions in Monomer-Template Complexes. ACS Cent Sci, 2, 2016
2BX8	Human serum albumin complexed with azapropazone 分子名称: AZAPROPAZONE, SERUM ALBUMIN 著者 Ghuman, J, Zunszain, P.A, Petitpas, I, Bhattacharya, A.A, Curry, S. 登録日 2005-07-25 公開日 2005-09-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural Basis of the Drug-Binding Specificity of Human Serum Albumin. J.Mol.Biol., 353, 2005
3LYQ	Crystal structure of IpgB2 from Shigella flexneri 分子名称: CITRATE ANION, IpgB2, MU-OXO-DIIRON 著者 Klink, B.U, Barden, S, Heidler, T.V, Borchers, C, Ladwein, M, Stradal, T.E.B, Rottner, K, Heinz, D.W. 登録日 2010-02-28 公開日 2010-03-31 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of Shigella IPGB2 in complex with human RhoA: Implications for the mechanism of bacterial GEF-mimicry J.Biol.Chem., 285, 2010
7KXD	CRYSTAL STRUCTURE OF RAR-RELATED ORPHAN RECEPTOR C (NHIS-RORGT(244-487)-L6-SRC1(678-692)) IN COMPLEX WITH {3,5-DICHLORO-4-[4-METHOXY-3-(PROPAN-2-YL)PHENOXY]PHENYL}METHANOL 分子名称: Nuclear receptor ROR-gamma, Nuclear receptor coactivator 1 peptide chimera, {3,5-dichloro-4-[4-methoxy-3-(propan-2-yl)phenoxy]phenyl}methanol 著者 Sack, J. 登録日 2020-12-03 公開日 2021-01-20 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.624 Å) 主引用文献 Substituted diaryl ether compounds as retinoic acid-related orphan Receptor-gamma t (ROR gamma t) agonists. Bioorg.Med.Chem.Lett., 35, 2021
1S08	Crystal Structure of the D147N Mutant of 7,8-Diaminopelargonic Acid Synthase 分子名称: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, SODIUM ION 著者 Sandmark, J, Eliot, A.C, Famm, K, Schneider, G, Kirsch, J.F. 登録日 2003-12-30 公開日 2004-03-23 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Conserved and nonconserved residues in the substrate binding site of 7,8-diaminopelargonic acid synthase from Escherichia coli are essential for catalysis. Biochemistry, 43, 2004
4K24	Structure of anti-uPAR Fab ATN-658 in complex with uPAR 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Urokinase plasminogen activator surface receptor, ... 著者 Huang, M.D, Xu, X, Yuan, C. 登録日 2013-04-08 公開日 2014-02-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Identification of a New Epitope in uPAR as a Target for the Cancer Therapeutic Monoclonal Antibody ATN-658, a Structural Homolog of the uPAR Binding Integrin CD11b ( alpha M) Plos One, 9, 2014
2ZBG	Calcium pump crystal structure with bound AlF4 and TG in the absence of calcium 分子名称: MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ... 著者 Toyoshima, C, Ogawa, H, Norimatsu, Y. 登録日 2007-10-20 公開日 2007-12-11 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump Proc.Natl.Acad.Sci.Usa, 104, 2007

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