PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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6WEA	YTH domain of human YTHDC1 with a 10mer Oligo Containing N6mA 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*CP*GP*GP*(6MA)P*CP*TP*TP*C)-3'), SODIUM ION, ... 著者 Horton, J.R, Cheng, X. 登録日 2020-04-01 公開日 2020-07-15 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Biochemical and structural basis for YTH domain of human YTHDC1 binding to methylated adenine in DNA. Nucleic Acids Res., 48, 2020
3KER	D-Dopachrome tautomerase (D-DT)/ macrophage migration inhibitory factor 2 (MIF2) complexed with inhibitor 4-IPP 分子名称: 4-phenylpyrimidine, CHLORIDE ION, D-dopachrome decarboxylase, ... 著者 Zierow, S, Lolis, E. 登録日 2009-10-26 公開日 2010-10-13 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 Targeting distinct tautomerase sites of D-DT and MIF with a single molecule for inhibition of neutrophil lung recruitment. Faseb J., 28, 2014
6YD7	X-ray structure of furin in complex with the canavanine-based inhibitor 4-guanidinomethyl-phenylacetyl-Arg-Tle-Canavanine-Amba 分子名称: 4-guanidinomethyl-phenylacetyl-Arg-Tle-Canavanine-Amba, CALCIUM ION, CHLORIDE ION, ... 著者 Dahms, S.O. 登録日 2020-03-20 公開日 2021-02-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The Basicity Makes the Difference: Improved Canavanine-Derived Inhibitors of the Proprotein Convertase Furin. Acs Med.Chem.Lett., 12, 2021
6YD4	X-ray structure of furin in complex with the canavanine-based inhibitor 4-guanidinomethyl-phenylacetyl-Canavanine-Tle-Canavanine-Amba 分子名称: 4-guanidinomethyl-phenylacetyl-Canavanine-Tle-Canavanine-Amba, CALCIUM ION, CHLORIDE ION, ... 著者 Dahms, S.O. 登録日 2020-03-20 公開日 2021-02-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Basicity Makes the Difference: Improved Canavanine-Derived Inhibitors of the Proprotein Convertase Furin. Acs Med.Chem.Lett., 12, 2021
3ZX0	NTPDase1 in complex with Heptamolybdate 分子名称: ACETIC ACID, CHLORIDE ION, ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 1, ... 著者 Zebisch, M, Schaefer, P, Straeter, N. 登録日 2011-08-04 公開日 2011-11-30 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystallographic evidence for a domain motion in rat nucleoside triphosphate diphosphohydrolase (NTPDase) 1. J. Mol. Biol., 415, 2012
5AO5	Endo180 D1-4, monoclinic form 分子名称: C-TYPE MANNOSE RECEPTOR 2, SODIUM ION, SULFATE ION 著者 Paracuellos, P, Briggs, D.C, Carafoli, F, Loncar, T, Hohenester, E. 登録日 2015-09-09 公開日 2015-10-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Insights Into Collagen Uptake by C-Type Mannose Receptors from the Crystal Structure of Endo180 Domains 1-4. Structure, 23, 2015
3ZXD	wild-type lysenin 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ... 著者 De Colibus, L, Sonnen, A.F.P, Morris, K.J, Siebert, C.A, Abrusci, P, Plitzko, J, Hodnik, V, Leippe, M, Volpi, E, Anderluh, G, Gilbert, R.J.C. 登録日 2011-08-09 公開日 2012-09-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition. Structure, 20, 2012
6XK2	Crystal structure of Ribokinase from Cryptococcus neoformans var. grubii serotype A in complex with ADP 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Ribokinase, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2020-06-25 公開日 2020-07-15 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of Ribokinase from Cryptococcus neoformans var. grubii serotype A in complex with ADP to be published
3RT5	Lysozyme in 30% propanol 分子名称: ACETATE ION, CHLORIDE ION, ISOPROPYL ALCOHOL, ... 著者 Sharma, P, Solanki, A.K, Ashish 登録日 2011-05-03 公開日 2011-06-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal Structure of Lysozyme in 30% propanol to be published
5BYF	Crystal structure of human ribokinase in complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Ribokinase, ... 著者 Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S. 登録日 2015-06-10 公開日 2016-06-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of human ribokinase in complex with AMP To Be Published
6XUS	RNA dodecamer with a 6-hydrazino-2-aminopurine modified base 分子名称: MAGNESIUM ION, RNA dodecamer with a 6-hydrazino-2-aminopurine modified base, SODIUM ION 著者 Ennifar, E, Micura, R, Gasser, C, Brillet, K. 登録日 2020-01-21 公開日 2021-02-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Thioguanosine Conversion Enables mRNA-Lifetime Evaluation by RNA Sequencing Using Double Metabolic Labeling (TUC-seq DUAL). Angew.Chem.Int.Ed.Engl., 59, 2020
5C40	Crystal structure of human ribokinase in complex with AMPPCP in P21 spacegroup 分子名称: PHOSPHATE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Ribokinase, ... 著者 Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S. 登録日 2015-06-17 公開日 2016-06-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of human ribokinase in complex with AMPPCP in P21 spacegroup To Be Published
6E8S	Structure of the iMango-III aptamer bound to TO1-Biotin 分子名称: 4-[(3-{2-[(2-methoxyethyl)amino]-2-oxoethyl}-1,3-benzothiazol-3-ium-2-yl)methyl]-1-methylquinolin-1-ium, MAGNESIUM ION, POTASSIUM ION, ... 著者 Trachman, R.J, Ferre-D'Amare, A.R. 登録日 2018-07-31 公開日 2019-04-17 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structure and functional reselection of the Mango-III fluorogenic RNA aptamer. Nat. Chem. Biol., 15, 2019
6EJI	Structure of a glycosyltransferase 分子名称: CHLORIDE ION, GLYCEROL, POTASSIUM ION, ... 著者 Ramirez, A.S, Boilevin, J, Mehdipour, A.R, Hummer, G, Darbre, T, Reymond, J.L, Locher, K.P. 登録日 2017-09-21 公開日 2018-02-07 最終更新日 2018-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of the molecular ruler mechanism of a bacterial glycosyltransferase. Nat Commun, 9, 2018
437D	CRYSTAL STRUCTURE OF AN RNA PSEUDOKNOT FROM BEET WESTERN YELLOW VIRUS INVOLVED IN RIBOSOMAL FRAMESHIFTING 分子名称: MAGNESIUM ION, RNA PSEUDOKNOT, SODIUM ION 著者 Su, L, Chen, L, Egli, M, Berger, J.M, Rich, A. 登録日 1998-11-24 公開日 1998-12-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot. Nat.Struct.Biol., 6, 1999
6YD3	X-ray structure of furin in complex with the canavanine derived inhibitor 4-guanidinomethyl-phenylacetyl-Canavanine-Tle-Arg-Amba 分子名称: 4-guanidinomethyl-phenylacetyl-Canavanine-Tle-Arg-Amba, CALCIUM ION, CHLORIDE ION, ... 著者 Dahms, S.O. 登録日 2020-03-20 公開日 2021-02-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The Basicity Makes the Difference: Improved Canavanine-Derived Inhibitors of the Proprotein Convertase Furin. Acs Med.Chem.Lett., 12, 2021
3JS4	Crystal structure of iron superoxide dismutase from Anaplasma phagocytophilum 分子名称: FE (III) ION, SODIUM ION, Superoxide dismutase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2009-09-09 公開日 2009-09-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of Iron superoxide dismutase from Anaplasma phagocytophilum To be Published
5TJ7	Structure of WWP2 WW2-2,3-linker-HECT aa 334-398 linked to 485-865 分子名称: CHLORIDE ION, NEDD4-like E3 ubiquitin-protein ligase WWP2, SODIUM ION, ... 著者 Chen, Z, Gabelli, S.B. 登録日 2016-10-03 公開日 2017-05-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A Tunable Brake for HECT Ubiquitin Ligases. Mol. Cell, 66, 2017
6WE5	Crystal structure of an inorganic pyrophosphatase from Chlamydia trachomatis D/UW-3/Cx 分子名称: Inorganic pyrophosphatase, SODIUM ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2020-04-01 公開日 2020-04-08 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal structure of an inorganic pyrophosphatase from Chlamydia trachomatis D/UW-3/Cx. Acta Crystallogr.,Sect.F, 78, 2022
5BJV	X-ray structure of the PglF UDP-N-acetylglucosamine 4,6-dehydratase from Campylobacterjejuni, D396N/K397A variant in complex with UDP-N-acrtylglucosamine 分子名称: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ... 著者 Riegert, A.S, Thoden, J.B, Holden, H.M. 登録日 2017-09-12 公開日 2017-11-08 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and Biochemical Investigation of PglF from Campylobacter jejuni Reveals a New Mechanism for a Member of the Short Chain Dehydrogenase/Reductase Superfamily. Biochemistry, 56, 2017
6YD2	X-ray structure of furin in complex with the canavanine-based inhibitor 4-aminomethyl-phenylacetyl-canavanine-Tle-Arg-Amba 分子名称: 4-aminomethyl-phenylacetyl-canavanine-Tle-Arg-Amba, CALCIUM ION, CHLORIDE ION, ... 著者 Dahms, S.O. 登録日 2020-03-20 公開日 2021-02-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The Basicity Makes the Difference: Improved Canavanine-Derived Inhibitors of the Proprotein Convertase Furin. Acs Med.Chem.Lett., 12, 2021
6DIC	D276G DNA polymerase beta substrate complex with templating cytosine and incoming Fapy-dGTP analog 分子名称: 1-[2-amino-5-(formylamino)-6-oxo-1,6-dihydropyrimidin-4-yl]-2,5-anhydro-1,3-dideoxy-6-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-D-ribo-hexitol, CALCIUM ION, CHLORIDE ION, ... 著者 Freudenthal, B.D, Smith, M.R, Wilson, S.H, Beard, W.A. 登録日 2018-05-23 公開日 2019-01-30 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.992 Å) 主引用文献 A guardian residue hinders insertion of a Fapy•dGTP analog by modulating the open-closed DNA polymerase transition. Nucleic Acids Res., 47, 2019
1YY6	The Crystal Structure of the N-terminal domain of HAUSP/USP7 complexed with an EBNA1 peptide 分子名称: Epstein-Barr nuclear antigen-1, SODIUM ION, Ubiquitin carboxyl-terminal hydrolase 7 著者 Saridakis, V, Sheng, Y, Sarkari, F, Holowaty, M, Shire, K, Nguyen, T, Zhang, R, Liao, J, Lee, W, Edwards, A.M, Arrowsmith, C.H, Frappier, L. 登録日 2005-02-23 公開日 2005-04-05 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of the p53 binding domain of HAUSP/USP7 bound to Epstein-Barr nuclear antigen 1 implications for EBV-mediated immortalization. Mol.Cell, 18, 2005
5C80	X-ray structure uridine phosphorylase from Vibrio cholerae in complex with uridine at 2.24 A resolution 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M. 登録日 2015-06-25 公開日 2016-07-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.243 Å) 主引用文献 X-ray structures of uridine phosphorylase from Vibrio cholerae in complexes with uridine, thymidine, uracil, thymine, and phosphate anion: Substrate specificity of bacterial uridine phosphorylases Crystallography Reports, 61, 2016
6GAS	Crystal structure of oxidised ferredoxin/flavodoxin NADP+ oxidoreductase 2 (FNR2) from Bacillus cereus 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, SODIUM ION 著者 Gudim, I, Hersleth, H.-P. 登録日 2018-04-12 公開日 2018-09-05 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The Characterization of Different Flavodoxin Reductase-Flavodoxin (FNR-Fld) Interactions Reveals an Efficient FNR-Fld Redox Pair and Identifies a Novel FNR Subclass. Biochemistry, 57, 2018

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