PDB: 35756 件ウェブページステータス検索Chemie searchBIRD

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7BEY	Het-N2-SO3- - De novo designed three-helix heterodimer with Cysteine S-sulfate at the N2 position of the alpha-helix 分子名称: 'Cys-N2-SO3-' Strand, 'Positive' Strand, SULFATE ION 著者 McEwen, A.G, Poussin-Courmontagne, P, Naudin, E.A, DeGrado, W.F, Torbeev, V. 登録日 2021-01-06 公開日 2021-03-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Acyl Transfer Catalytic Activity in De Novo Designed Protein with N-Terminus of alpha-Helix As Oxyanion-Binding Site. J.Am.Chem.Soc., 143, 2021
2OFP	Crystal structure of Escherichia coli ketopantoate reductase in a ternary complex with NADP+ and pantoate 分子名称: 1,4-DIETHYLENE DIOXIDE, ACETATE ION, Ketopantoate reductase, ... 著者 Ciulli, A, Chirgadze, D.Y, Smith, A.G, Blundell, T.L, Abell, C. 登録日 2007-01-04 公開日 2007-01-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structure of Escherichia coli Ketopantoate Reductase in a Ternary Complex with NADP+ and Pantoate Bound: SUBSTRATE RECOGNITION, CONFORMATIONAL CHANGE, AND COOPERATIVITY. J.Biol.Chem., 282, 2007
4C4T	Structure of beta-phosphoglucomutase in complex with a phosphonate analogue of beta-glucose-1-phosphate and aluminium tetrafluoride 分子名称: (1R)-1,5-anhydro-1-[(S)-fluoro(phosphono)methyl]-D-glucitol, BETA-PHOSPHOGLUCOMUTASE, MAGNESIUM ION, ... 著者 Pellegrini, E, Bowler, M.W. 登録日 2013-09-09 公開日 2014-07-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Alpha-Fluorophosphonates Reveal How a Phosphomutase Conserves Transition State Conformation Over Hexose Recognition in its Two-Step Reaction. Proc.Natl.Acad.Sci.USA, 111, 2014
2OGR	Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution 分子名称: FLUORESCENT PROTEIN FP538 著者 Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z. 登録日 2007-01-08 公開日 2007-09-25 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom Bioorg.Khim., 33
6SRD	Structure of Rex8A from Paenibacillus barcinonensis complexed with xylose. 分子名称: GLYCEROL, Reducing-end xylose-releasing exo-oligoxylanase Rex8A, beta-D-xylopyranose 著者 Jimenez-Ortega, E, Ramirez-Escudero, M, Sanz-Aparicio, J. 登録日 2019-09-05 公開日 2020-05-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Structural analysis of the reducing-end xylose-releasing exo-oligoxylanase Rex8A from Paenibacillus barcinonensis BP-23 deciphers its molecular specificity. Febs J., 287, 2020
7BY9	Malate Dehydrogenase from Geobacillus stearothermophilus (gs-MDH) complexed with Oxaloacetic Acid (OAA) and Nicotinamide Adenine Dinucleotide (NAD) 分子名称: Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXALOACETATE ION 著者 Shimozawa, Y, Nakamura, T, Himiyama, T, Nishiya, Y. 登録日 2020-04-22 公開日 2021-03-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural analysis and reaction mechanism of malate dehydrogenase from Geobacillus stearothermophilus. J.Biochem., 170, 2021
5C6G	Structural Insights into the Scc2-Scc4 Cohesin Loader 分子名称: AGR133Cp, Sister chromatid cohesion protein 2 著者 Singleton, M.R, Chao, W.C.H. 登録日 2015-06-23 公開日 2015-08-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural Studies Reveal the Functional Modularity of the Scc2-Scc4 Cohesin Loader. Cell Rep, 12, 2015
7BY8	Malate Dehydrogenase from Geobacillus stearothermophilus (gs-MDH) 分子名称: Malate dehydrogenase 著者 Shimozawa, Y, Nakamura, T, Himiyama, T, Nishiya, Y. 登録日 2020-04-22 公開日 2021-03-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.945 Å) 主引用文献 Structural analysis and reaction mechanism of malate dehydrogenase from Geobacillus stearothermophilus. J.Biochem., 170, 2021
2NRE	Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA 分子名称: POTASSIUM ION, leucyl tRNA, tRNA pseudouridine synthase A 著者 Hur, S, Stroud, R.M. 登録日 2006-11-01 公開日 2007-05-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 How U38, 39, and 40 of Many tRNAs Become the Targets for Pseudouridylation by TruA. Mol.Cell, 26, 2007
4C3H	Structure of 14-subunit RNA polymerase I at 3.27 A resolution, crystal form C2-93 分子名称: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, ... 著者 Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W. 登録日 2013-08-24 公開日 2013-10-23 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.27 Å) 主引用文献 Crystal Structure of the 14-Subunit RNA Polymerase I Nature, 502, 2013
6GZP	Llama nanobody PorM_02 structure determined at room temperature by in-situ diffraction in ChipX microfluidic device 分子名称: Nanobody 著者 Roche, J, Gaubert, A, Desmyter, A, De Wijn, R, Sauter, C, Roussel, A. 登録日 2018-07-04 公開日 2018-07-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A simple and versatile microfluidic device for efficient biomacromolecule crystallization and structural analysis by serial crystallography. Iucrj, 6, 2019
2NTH	Structure of Spin-labeled T4 Lysozyme Mutant L118R1 分子名称: Lysozyme, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate 著者 Guo, Z, Cascio, D, Hideg, K, Hubbell, W.L. 登録日 2006-11-07 公開日 2007-06-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural determinants of nitroxide motion in spin-labeled proteins: Tertiary contact and solvent-inaccessible sites in helix G of T4 lysozyme. Protein Sci., 16, 2007
2FEO	Mutant R188M of The Cytidine Monophosphate Kinase from E. coli complexed with dCMP 分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Cytidylate kinase, SULFATE ION 著者 Ofiteru, A, Bucurenci, N, Alexov, E, Bertrand, T, Briozzo, P, Munier-Lehmann, H, Tourneux, L, Barzu, O, Gilles, A.M. 登録日 2005-12-16 公開日 2006-01-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural and functional consequences of single amino acid substitutions in the pyrimidine base binding pocket of Escherichia coli CMP kinase. Febs J., 274, 2007
7BYA	Malate Dehydrogenase from Geobacillus stearothermophilus (gs-MDH) complexed with Oxaloacetic Acid (OAA) and Adenosine 5'-Diphosphoribose (APR) 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Malate dehydrogenase, OXALOACETATE ION 著者 Shimozawa, Y, Nakamura, T, Himiyama, T, Nishiya, Y. 登録日 2020-04-22 公開日 2021-03-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural analysis and reaction mechanism of malate dehydrogenase from Geobacillus stearothermophilus. J.Biochem., 170, 2021
2FEW	Complex of enzyme IIAMTL and phosphorylated enzyme IIBMTL from Escherichia coli NMR, restrained regularized mean structure 分子名称: PTS system mannitol-specific EIICBA component, mannitol-specific PTS system enzyme IIABC components 著者 Clore, G.M, Suh, J.Y. 登録日 2005-12-16 公開日 2006-02-07 最終更新日 2021-10-20 実験手法 SOLUTION NMR 主引用文献 Solution Structure of a Post-transition State Analog of the Phosphotransfer Reaction between the A and B Cytoplasmic Domains of the Mannitol Transporter IIMannitol of the Escherichia coli Phosphotransferase System J.Biol.Chem., 281, 2006
6SS6	Structure of arginase-2 in complex with the inhibitory human antigen-binding fragment Fab C0020187 分子名称: Arginase-2, mitochondrial, Fab C0020187 heavy chain (IgG1), ... 著者 Burschowsky, D, Addyman, A, Fiedler, S, Groves, M, Haynes, S, Seewooruthun, C, Carr, M. 登録日 2019-09-06 公開日 2020-06-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Extensive sequence and structural evolution of Arginase 2 inhibitory antibodies enabled by an unbiased approach to affinity maturation. Proc.Natl.Acad.Sci.USA, 117, 2020
5CEF	Cystal structure of aspartate semialdehyde dehydrogenase from Cryptococcus neoformans 分子名称: 1,2-ETHANEDIOL, Aspartate-semialdehyde dehydrogenase 著者 Dahal, G.P, Viola, R.E. 登録日 2015-07-06 公開日 2015-11-18 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of a fungal form of aspartate semialdehyde dehydrogenase from Cryptococcus neoformans. Acta Crystallogr.,Sect.F, 71, 2015
2O02	Phosphorylation independent interactions between 14-3-3 and Exoenzyme S: from structure to pathogenesis 分子名称: 14-3-3 protein zeta/delta, BENZOIC ACID, ExoS (416-430) peptide 著者 Ottmann, C, Yasmin, L, Weyand, M, Hauser, A.R, Wittinghofer, A, Hallberg, B. 登録日 2006-11-27 公開日 2007-11-27 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Phosphorylation-independent interaction between 14-3-3 and exoenzyme S: from structure to pathogenesis Embo J., 26, 2007
2FL2	crystal structure of KSP in complex with inhibitor 19 分子名称: (1S)-1-CYCLOPROPYL-2-[(2S)-4-(2,5-DIFLUOROPHENYL)-2-PHENYL-2,5-DIHYDRO-1H-PYRROL-1-YL]-2-OXOETHANAMINE, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ... 著者 Yan, Y. 登録日 2006-01-05 公開日 2006-02-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Kinesin spindle protein (KSP) inhibitors. Part 2: the design, synthesis, and characterization of 2,4-diaryl-2,5-dihydropyrrole inhibitors of the mitotic kinesin KSP. Bioorg.Med.Chem.Lett., 16, 2006
6SGM	Crystal structure of monooxygenase RutA complexed with 4-Thiouracil. 分子名称: 4-Thiouracil, FLAVIN MONONUCLEOTIDE, Pyrimidine monooxygenase RutA 著者 Saleem-Batcha, R, Matthews, A, Teufel, R. 登録日 2019-08-05 公開日 2020-02-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Aminoperoxide adducts expand the catalytic repertoire of flavin monooxygenases. Nat.Chem.Biol., 16, 2020
6JM5	Crystal structure of TBC1D23 C terminal domain 分子名称: SODIUM ION, TBC1 domain family member 23 著者 Sun, Q, Huang, W. 登録日 2019-03-07 公開日 2019-10-16 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural and functional studies of TBC1D23 C-terminal domain provide a link between endosomal trafficking and PCH. Proc.Natl.Acad.Sci.USA, 116, 2019
4C4R	Structure of beta-phosphoglucomutase in complex with a phosphonate analogue of beta-glucose-1-phosphate and magnesium trifluoride 分子名称: (1R)-1,5-anhydro-1-(phosphonomethyl)-D-glucitol, BETA-PHOSPHOGLUCOMUTASE, MAGNESIUM ION, ... 著者 Pellegrini, E, Bowler, M.W. 登録日 2013-09-09 公開日 2014-07-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Alpha-Fluorophosphonates Reveal How a Phosphomutase Conserves Transition State Conformation Over Hexose Recognition in its Two-Step Reaction. Proc.Natl.Acad.Sci.USA, 111, 2014
6SJ3	Amidohydrolase, AHS with 3-HBA 分子名称: 1,2-ETHANEDIOL, 3-HYDROXYBENZOIC ACID, Amidohydrolase, ... 著者 Naismith, J.H, Song, H. 登録日 2019-08-12 公開日 2020-01-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.17 Å) 主引用文献 The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility. Angew.Chem.Int.Ed.Engl., 59, 2020
5C7L	Structure of human testis-specific glyceraldehyde-3-phosphate dehydrogenase apo form 分子名称: Glyceraldehyde-3-phosphate dehydrogenase, testis-specific 著者 Betts, L, Machius, M, Danshina, P, O'Brien, D. 登録日 2015-06-24 公開日 2016-03-09 最終更新日 2019-12-11 実験手法 X-RAY DIFFRACTION (1.862 Å) 主引用文献 Structural analyses to identify selective inhibitors of glyceraldehyde 3-phosphate dehydrogenase-S, a sperm-specific glycolytic enzyme. Mol. Hum. Reprod., 22, 2016
6SXR	E221Q mutant of GH54 a-l-arabinofuranosidase soaked with 4-nitrophenyl a-l-arabinofuranoside 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 McGregor, N.G.S, Davies, G.J, Nin-Hill, A, Rovira, C. 登録日 2019-09-26 公開日 2020-02-26 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Rational Design of Mechanism-Based Inhibitors and Activity-Based Probes for the Identification of Retaining alpha-l-Arabinofuranosidases. J.Am.Chem.Soc., 142, 2020

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