PDB: 222624 件ウェブページステータス検索Chemie searchBIRD

---

8UJA	T33-fn10 - Designed Tetrahedral Protein Cage Using Fragment-based Hydrogen Bond Networks 分子名称: T33-fn10: engineered DrsE like sulfur reductase, T33-fn10: engineered enoyl-CoA hydratase/isomerase 著者 Meador, K, Sawaya, M.R, Yeates, T.O. 登録日 2023-10-11 公開日 2024-03-06 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (6 Å) 主引用文献 A suite of designed protein cages using machine learning and protein fragment-based protocols. Structure, 32, 2024
8UIW	yjdF riboswitch from R. gauvreauii in complex with chelerythrine bound to Fab BL3-6 S97N 分子名称: 1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium, Fab BL3-6 S97N heavy chain, Fab BL3-6 S97N light chain, ... 著者 Krochmal, D, Lewicka, A, Piccirilli, J.A. 登録日 2023-10-10 公開日 2024-04-10 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 Structural basis for promiscuity in ligand recognition by yjdF riboswitch. Cell Discov, 10, 2024
8UIV	H47Q NicC with bound FAD 分子名称: 6-hydroxynicotinate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE 著者 Hicks, K.A, Perry, K. 登録日 2023-10-10 公開日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.511 Å) 主引用文献 Ligand bound structure of a 6-hydroxynicotinic acid 3-monooxygenase provides mechanistic insights. Arch.Biochem.Biophys., 752, 2024
8UIS	Structure of transcription complex Pol II-DSIF-NELF-TFIIS 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... 著者 Su, B.G, Vos, S.M. 登録日 2023-10-10 公開日 2024-03-20 最終更新日 2024-04-17 実験手法 ELECTRON MICROSCOPY (3.23 Å) 主引用文献 Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing. Mol.Cell, 84, 2024
8UIR	SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-XBB.1.16) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein 著者 Zhang, Q.E, Acharya, P. 登録日 2023-10-10 公開日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 SARS-CoV-2 Omicron-XBB.1.16 3-RBD down Spike Protein Trimer consensus (S-GSAS-Omicron-XBB.1.16) To Be Published
8UIQ	H47Q NicC with 2-mercaptopyridine ligand 分子名称: 2-PYRIDINETHIOL, 6-hydroxynicotinate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE 著者 Hicks, K.A, Perry, K, Turlington, Z.R, Vaz Ferreira de Macedo, S. 登録日 2023-10-10 公開日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Ligand bound structure of a 6-hydroxynicotinic acid 3-monooxygenase provides mechanistic insights. Arch.Biochem.Biophys., 752, 2024
8UIP	Cryo-EM Structure of Human Ninjurin1 curved oligomer 分子名称: Ninjurin-1 著者 David, L, Wu, H. 登録日 2023-10-10 公開日 2024-05-01 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 NINJ1 mediates plasma membrane rupture by cutting and releasing membrane disks. Cell, 187, 2024
8UIN	Structure of the C3bBb-albicin complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Albicin, ... 著者 Andersen, J.F, Lei, H. 登録日 2023-10-10 公開日 2024-05-08 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.86 Å) 主引用文献 Mechanism of complement inhibition by a mosquito protein revealed through cryo-EM. Commun Biol, 7, 2024
8UII	Cryo-EM map of human clamp-clamp loader ATAD5-RFC-closed PCNA complex in intermediate state 1 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ... 著者 Wang, F, He, Q, Li, H. 登録日 2023-10-10 公開日 2024-05-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader. Nat.Struct.Mol.Biol., 2024
8UIF	Crystal structure of SARS CoV-2 3CL protease in complex with GSK4365096A 分子名称: 3C-like proteinase nsp5, N-[(benzyloxy)carbonyl]-4-fluoro-L-phenylalanyl-N-{(2R)-1-[(2S)-oxolan-2-yl]-3-[(3S)-2-oxooxolan-3-yl]propan-2-yl}-L-leucinamide 著者 Concha, N.O, Williams, S.P. 登録日 2023-10-10 公開日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Exploration of the P1 residue in 3CL protease inhibitors leading to the discovery of a 2-tetrahydrofuran P1 replacement. Bioorg.Med.Chem., 100, 2024
8UIA	Crystal structure of SARS CoV-2 3CL protease in complex with GSK4365097A 分子名称: 3C-like proteinase nsp5, CHLORIDE ION, GLYCEROL, ... 著者 Concha, N.O, Williams, S.P. 登録日 2023-10-10 公開日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Exploration of the P1 residue in 3CL protease inhibitors leading to the discovery of a 2-tetrahydrofuran P1 replacement. Bioorg.Med.Chem., 100, 2024
8UI9	Cryo-EM map of human clamp-clamp loader ATAD5-RFC-cracked PCNA complex in intermediate state 2 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ... 著者 Wang, F, He, Q, Li, H. 登録日 2023-10-10 公開日 2024-05-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader. Nat.Struct.Mol.Biol., 2024
8UI8	Cryo-EM map of human clamp-clamp loader ATAD5-RFC-two PCNAs complex in intermediate state 3 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ... 著者 Wang, F, He, Q, Li, H. 登録日 2023-10-10 公開日 2024-05-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader. Nat.Struct.Mol.Biol., 2024
8UI7	Cryo-EM map of human clmap-clamp loader ATAD5-RFC-gapped PCNA complex in intermediate state 3 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase family AAA domain-containing protein 5, MAGNESIUM ION, ... 著者 Wang, F, He, Q, Li, H. 登録日 2023-10-10 公開日 2024-05-29 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 The human ATAD5 has evolved unique structural elements to function exclusively as a PCNA unloader. Nat.Struct.Mol.Biol., 2024
8UI6	X-ray crystal structure of Toxoplasma gondii GalNAc-T3 in complex with UDP-GalNAc, Mn2+, and Muc5AC-3,13 分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Glycosyl transferase, MANGANESE (II) ION, ... 著者 Kumar, P, Samara, N.L. 登録日 2023-10-10 公開日 2024-05-15 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 A Toxoplasma gondii O-glycosyltransferase that modulates bradyzoite cyst wall rigidity is distinct from host homologues. Nat Commun, 15, 2024
8UI2	T33-ml28 - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms 分子名称: T33-ml28-redesigned-CutA-fold, T33-ml28-redesigned-tandem-BMC-T-fold 著者 Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O. 登録日 2023-10-09 公開日 2024-03-06 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.73 Å) 主引用文献 A suite of designed protein cages using machine learning and protein fragment-based protocols. Structure, 32, 2024
8UI1	X-ray crystal structure of Toxoplasma gondii GalNAc-T3 at pH 7.3 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Glycosyl transferase, ... 著者 Kumar, P, Samara, N.L. 登録日 2023-10-09 公開日 2024-05-15 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.91 Å) 主引用文献 A Toxoplasma gondii O-glycosyltransferase that modulates bradyzoite cyst wall rigidity is distinct from host homologues. Nat Commun, 15, 2024
8UI0	Structure of poised transcription complex Pol II-DSIF-NELF - pre-translocated 分子名称: DNA, DNA (38-MER), DNA-directed RNA polymerase II subunit E, ... 著者 Vos, S.M, Su, B.G. 登録日 2023-10-09 公開日 2024-03-20 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing. Mol.Cell, 2024
8UHZ	X-ray crystal structure of Toxoplasma gondii GalNAc-T3 in complex with Mn2+ 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Glycosyl transferase, ... 著者 Kumar, P, Samara, N.L. 登録日 2023-10-09 公開日 2024-05-15 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 A Toxoplasma gondii O-glycosyltransferase that modulates bradyzoite cyst wall rigidity is distinct from host homologues. Nat Commun, 15, 2024
8UHV	X-ray crystal structure of Toxoplasma gondii Apo GalNAc-T3 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Glycosyl transferase 著者 Kumar, P, Samara, N.L. 登録日 2023-10-09 公開日 2024-05-15 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A Toxoplasma gondii O-glycosyltransferase that modulates bradyzoite cyst wall rigidity is distinct from host homologues. Nat Commun, 15, 2024
8UHO	Crystal structure of SARS CoV-2 3CL protease in complex with GSK4365096A 分子名称: 3C-like proteinase nsp5, N-[(benzyloxy)carbonyl]-4-fluoro-L-phenylalanyl-N-[(2S,3Z)-1-[(2S)-oxolan-2-yl]-3-(2-oxooxolan-3-ylidene)propan-2-yl]-L-leucinamide 著者 Concha, N.O, Williams, S.P. 登録日 2023-10-09 公開日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Exploration of the P1 residue in 3CL protease inhibitors leading to the discovery of a 2-tetrahydrofuran P1 replacement. Bioorg.Med.Chem., 100, 2024
8UHL	ATAD2B bromodomain in complex with histone H4 acetylated at lysine 12 分子名称: ATPase family AAA domain-containing protein 2B, Histone H4 著者 Phillips, M, Montgomery, C, Nix, J.C, Glass, K.C. 登録日 2023-10-09 公開日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Impact of Combinatorial Histone Modifications on Acetyllysine Recognition by the ATAD2 and ATAD2B Bromodomains. J.Med.Chem., 67, 2024
8UHI	Structure of the far-red light-absorbing allophycocyanin core expressed during FaRLiP 分子名称: MAGNESIUM ION, RIBULOSE-1,5-DIPHOSPHATE, Ribulose bisphosphate carboxylase large subunit, ... 著者 Gisriel, C.J, Bryant, D.A, Brudvig, G.W, Shen, G. 登録日 2023-10-09 公開日 2024-01-03 最終更新日 2024-01-31 実験手法 ELECTRON MICROSCOPY (2.35 Å) 主引用文献 Structure of the antenna complex expressed during far-red light photoacclimation in Synechococcus sp. PCC 7335. J.Biol.Chem., 300, 2023
8UHG	Structure of paused transcription complex Pol II-DSIF-NELF - poised post-translocated 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Vos, S.M, Su, B.G. 登録日 2023-10-09 公開日 2024-03-20 最終更新日 2024-04-17 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing. Mol.Cell, 84, 2024
8UHF	Cryo-EM of Vibrio cholerae toxin co-regulated pilus - asymmetric reconstruction 分子名称: Toxin co-regulated pilin 著者 Sonani, R.R, Kundra, S, Craig, L, Egelman, E.H. 登録日 2023-10-09 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Tad and toxin-coregulated pilus structures reveal unexpected diversity in bacterial type IV pili. Proc.Natl.Acad.Sci.USA, 120, 2023

<104105106107108109110111112113114115116117118119>