PDB: 1138 件ウェブページステータス検索Chemie searchBIRD

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5IY7	Human holo-PIC in the open state 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (8.6 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
5IYB	Human core-PIC in the open state 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
5IYD	Human core-PIC in the initial transcribing state (no IIS) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
7ZS9	Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome (complex A) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Wang, H, Cramer, P. 登録日 2022-05-06 公開日 2022-11-16 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structures of transcription preinitiation complex engaged with the +1 nucleosome. Nat.Struct.Mol.Biol., 30, 2023
8BVW	RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W) 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P. 登録日 2022-12-20 公開日 2023-05-03 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural basis of transcription reduction by a promoter-proximal +1 nucleosome. Mol.Cell, 83, 2023
8BZ1	RNA polymerase II core pre-initiation complex with the proximal +1 nucleosome (cPIC-Nuc10W) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P. 登録日 2022-12-14 公開日 2023-05-03 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of transcription reduction by a promoter-proximal +1 nucleosome. Mol.Cell, 83, 2023
8BYQ	RNA polymerase II pre-initiation complex with the proximal +1 nucleosome (PIC-Nuc10W) 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P. 登録日 2022-12-14 公開日 2023-05-03 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural basis of transcription reduction by a promoter-proximal +1 nucleosome. Mol.Cell, 83, 2023
6F42	RNA Polymerase III closed complex CC1. 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W. 登録日 2017-11-29 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (5.5 Å) 主引用文献 Molecular mechanism of promoter opening by RNA polymerase III. Nature, 553, 2018
6F40	RNA Polymerase III open complex 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W. 登録日 2017-11-29 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Molecular mechanism of promoter opening by RNA polymerase III. Nature, 553, 2018
6F44	RNA Polymerase III closed complex CC2. 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W. 登録日 2017-11-29 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Molecular mechanism of promoter opening by RNA polymerase III. Nature, 553, 2018
3J1O	Cryo-EM map of a yeast minimal preinitiation complex interacting with the Mediator Head module 分子名称: Mediator of RNA polymerase II transcription subunit 11, Mediator of RNA polymerase II transcription subunit 17, Mediator of RNA polymerase II transcription subunit 18, ... 著者 Asturias, F.J, Imasaki, T. 登録日 2012-03-29 公開日 2013-03-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (16 Å) 主引用文献 Interaction of the mediator head module with RNA polymerase II. Structure, 20, 2012
6F41	RNA Polymerase III initially transcribing complex 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W. 登録日 2017-11-29 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Molecular mechanism of promoter opening by RNA polymerase III. Nature, 553, 2018
6EU0	RNA Polymerase III open pre-initiation complex (OC-PIC) 分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... 著者 Abascal-Palacios, G, Ramsay, E.P, Beuron, F, Morris, E, Vannini, A. 登録日 2017-10-27 公開日 2018-01-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural basis of RNA polymerase III transcription initiation. Nature, 553, 2018
4JHY	Crystal structure of a TBP-like protein (BDI_3606) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution 分子名称: hypothetical protein 著者 Joint Center for Structural Genomics (JCSG) 登録日 2013-03-05 公開日 2013-04-03 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of a hypothetical protein (BDI_3606) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution To be published
6G7E	Crystal structure of Chaetomium thermophilum Mot1 (E1434Q, 1837-1886 deletion mutant) 分子名称: Helicase-like protein 著者 Butryn, A, Hopfner, K.-P. 登録日 2018-04-05 公開日 2018-10-17 実験手法 X-RAY DIFFRACTION (3.2129 Å) 主引用文献 Crystal structure of the full Swi2/Snf2 remodeler Mot1 in the resting state. Elife, 7, 2018
6LQZ	Solution structure of Taf14ET-Sth1EBMC 分子名称: Nuclear protein STH1/NPS1, Transcription initiation factor TFIID subunit 14 著者 Wu, B, Chen, G, Chen, Y. 登録日 2020-01-15 公開日 2020-08-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Taf14 recognizes a common motif in transcriptional machineries and facilitates their clustering by phase separation. Nat Commun, 11, 2020
6HQA	Molecular structure of promoter-bound yeast TFIID 分子名称: Histone-fold, Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation, ... 著者 Kolesnikova, O, Ben-Shem, A, Luo, J, Ranish, J, Schultz, P, Papai, G. 登録日 2018-09-24 公開日 2018-11-21 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (7.1 Å) 主引用文献 Molecular structure of promoter-bound yeast TFIID. Nat Commun, 9, 2018
3J1N	Cryo-EM map of a yeast minimal preinitiation complex interacting with the Mediator Head module 分子名称: DNA-directed RNA polymerase II subunit RPABC1, DNA-directed RNA polymerase II subunit RPABC2, DNA-directed RNA polymerase II subunit RPABC3, ... 著者 Asturias, F.J, Imasaki, T. 登録日 2012-03-29 公開日 2013-03-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (16 Å) 主引用文献 Interaction of the mediator head module with RNA polymerase II. Structure, 20, 2012
5M2G	PCE reductive dehalogenase from S. multivorans in complex with 2,4,6-tribromophenol 分子名称: 2,4,6-TRIBROMOPHENOL, BENZAMIDINE, GLYCEROL, ... 著者 Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G. 登録日 2016-10-12 公開日 2017-07-12 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer. Nat Commun, 8, 2017
5F4W	Tagatose-1,6-bisphosphate aldolase from Streptococcus pyogenes in complex with TBP 分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, 1,6-di-O-phosphono-D-tagatose, CALCIUM ION, ... 著者 LowKam, C. 登録日 2015-12-03 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.663 Å) 主引用文献 NON-STEREOSPECIFIC SUBSTRATE CLEAVAGE BY TAGATOSE-BISPHOSPHATE CLASS I ALDOLASE To Be Published
5UD4	Class II fructose-1,6-bisphosphate aldolase H180Q variant of Helicobacter pylori with TBP 分子名称: 1,6-di-O-phosphono-D-tagatose, Fructose-bisphosphate aldolase, SODIUM ION, ... 著者 Jacques, B, Sygusch, J. 登録日 2016-12-23 公開日 2018-04-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases. J. Biol. Chem., 293, 2018
3SKP	The structure of apo-human transferrin C-lobe with bound sulfate ions 分子名称: SULFATE ION, Serotransferrin 著者 Noinaj, N, Steere, A.N, Mason, A.B, Buchanan, S.K. 登録日 2011-06-22 公開日 2012-02-15 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis for iron piracy by pathogenic Neisseria. Nature, 483, 2012
1SJR	NMR Structure of RRM2 from Human Polypyrimidine Tract Binding Protein Isoform 1 (PTB1) 分子名称: Polypyrimidine tract-binding protein 1 著者 Simpson, P.J, Monie, T.P, Szendroi, A, Davydova, N, Tyzack, J.K, Conte, M.R, Read, C.M, Cary, P.D, Svergun, D.I, Konarev, P.V, Petoukhov, M.V, Curry, S, Matthews, S.J. 登録日 2004-03-04 公開日 2004-09-14 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure and RNA Interactions of the N-Terminal RRM Domains of PTB Structure, 12, 2004
1SJQ	NMR Structure of RRM1 from Human Polypyrimidine Tract Binding Protein Isoform 1 (PTB1) 分子名称: Polypyrimidine tract-binding protein 1 著者 Simpson, P.J, Monie, T.P, Szendroi, A, Davydova, N, Tyzack, J.K, Conte, M.R, Read, C.M, Cary, P.D, Svergun, D.I, Konarev, P.V, Petoukhov, M.V, Curry, S, Matthews, S.J. 登録日 2004-03-04 公開日 2004-09-14 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure and RNA Interactions of the N-Terminal RRM Domains of PTB Structure, 12, 2004
2X9G	High resolution structure of TbPTR1 in complex with Pemetrexed 分子名称: 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Dawson, A, Barrack, K.L, Tulloch, L.B, Hunter, W.N. 登録日 2010-03-18 公開日 2010-06-16 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 High-Resolution Structures of Trypanosoma Brucei Pteridine Reductase Ligand Complexes Inform on the Placement of New Molecular Entities in the Active Site of a Potential Drug Target Acta Crystallogr.,Sect.D, 66, 2010

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