PDB: 224572 件ウェブページステータス検索Chemie searchBIRD

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1XC9	Structure of a high-fidelity polymerase bound to a benzo[a]pyrene adduct that blocks replication 分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, DNA polymerase I, DNA primer strand, ... 著者 Hsu, G.W, Huang, X, Luneva, N.P, Geacintov, N.E, Beese, L.S. 登録日 2004-09-01 公開日 2004-12-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of a High Fidelity DNA Polymerase Bound to a Benzo[a]pyrene Adduct That Blocks Replication J.Biol.Chem., 280, 2005
1XCA	APO-CELLULAR RETINOIC ACID BINDING PROTEIN II 分子名称: CELLULAR RETINOIC ACID BINDING PROTEIN TYPE II 著者 Chen, X, Ji, X. 登録日 1996-12-31 公開日 1998-07-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of apo-cellular retinoic acid-binding protein type II (R111M) suggests a mechanism of ligand entry. J.Mol.Biol., 278, 1998
1XCB	X-ray Structure of a Rex-Family Repressor/NADH Complex from Thermus Aquaticus 分子名称: CALCIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Redox-sensing transcriptional repressor rex 著者 Sickmier, E.A, Brekasis, D, Paranawithana, S, Bonanno, J.B, Burley, S.K, Paget, M.S, Kielkopf, C.L, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2004-09-01 公開日 2004-09-28 最終更新日 2021-02-03 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 X-Ray Structure of a Rex-Family Repressor/NADH Complex: Insights into the Mechanism of Redox Sensing Structure, 13, 2005
1XCC	1-Cys peroxidoxin from Plasmodium Yoelli 分子名称: 1-Cys peroxiredoxin 著者 Vedadi, M, Sharma, S, Houston, S, Lew, J, Wasney, G, Amani, M, Xu, X, Bray, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Hui, R, Bochkarev, A, Structural Genomics Consortium (SGC) 登録日 2004-09-01 公開日 2004-11-09 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Genome-scale protein expression and structural biology of Plasmodium falciparum and related Apicomplexan organisms. Mol.Biochem.Parasitol., 151, 2007
1XCD	Dimeric bovine tissue-extracted decorin, crystal form 1 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Decorin 著者 Scott, P.G, McEwan, P.A, Dodd, C.M, Bergmann, E.M, Bishop, P.N, Bella, J. 登録日 2004-09-01 公開日 2004-11-02 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Crystal structure of the dimeric protein core of decorin, the archetypal small leucine-rich repeat proteoglycan Proc.Natl.Acad.Sci.Usa, 101, 2004
1XCE	Helica Structure of DNA by Design: The T(GGGG)T Hexad Alignment 分子名称: 5'-D(*GP*CP*GP*GP*TP*TP*GP*GP*AP*T)-3' 著者 Webba da Silva, M. 登録日 2004-09-01 公開日 2005-02-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Experimental Demonstration of T:(G:G:G):T Hexad and T:A:A:T Tetrad Alignments within a DNA Quadruplex Stem Biochemistry, 44, 2005
1XCF	Crystal structure of P28L/Y173F tryptophan synthase alpha-subunits from Escherichia coli 分子名称: Tryptophan synthase alpha chain 著者 Jang, S.B. 登録日 2004-09-01 公開日 2004-11-02 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structures of wild-type and P28L/Y173F tryptophan synthase alpha-subunits from Escherichia coli Biochem.Biophys.Res.Commun., 323, 2004
1XCG	Crystal Structure of Human RhoA in complex with DH/PH fragment of PDZRHOGEF 分子名称: Rho guanine nucleotide exchange factor 11, Transforming protein RhoA 著者 Derewenda, U, Oleksy, A, Stevenson, A.S, Korczynska, J, Dauter, Z, Somlyo, A.P, Otlewski, J, Somlyo, A.V, Derewenda, Z.S. 登録日 2004-09-01 公開日 2004-12-14 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The crystal structure of RhoA in complex with the DH/PH fragment of PDZRhoGEF, an activator of the Ca(2+) sensitization pathway in smooth muscle Structure, 12, 2004
1XCH	MYOGLOBIN (HORSE HEART) MUTANT WITH LEU 104 REPLACED BY ASN (L104N) 分子名称: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION 著者 Maurus, R, Brayer, G.D. 登録日 1997-06-06 公開日 1997-09-17 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A myoglobin variant with a polar substitution in a conserved hydrophobic cluster in the heme binding pocket. Biochim.Biophys.Acta, 1341, 1997
1XCI	Mispair Aligned N3T-Butyl-N3T Interstrand Crosslink 分子名称: 5'-D(*CP*GP*AP*AP*AP*(TTM)P*TP*TP*TP*CP*G)-3' 著者 da Silva, M.W, Bierbryer, R.G, Wilds, C.J, Noronha, A.M, Colvin, O.M, Miller, P.S, Gamcsik, M.P. 登録日 2004-09-02 公開日 2005-08-16 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Intrastrand base-stacking buttresses widening of major groove in interstrand cross-linked B-DNA. Bioorg.Med.Chem., 13, 2005
1XCJ	Guanidinoacetate methyltransferase containing S-adenosylhomocysteine and guanidinoacetate 分子名称: GUANIDINO ACETATE, Guanidinoacetate N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 Komoto, J, Yamada, T, Takata, Y, Takusagawa, F. 登録日 2004-09-02 公開日 2004-12-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Catalytic mechanism of guanidinoacetate methyltransferase: crystal structures of guanidinoacetate methyltransferase ternary complexes. Biochemistry, 43, 2004
1XCK	Crystal structure of apo GroEL 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 60 kDa chaperonin, DI(HYDROXYETHYL)ETHER, ... 著者 Bartolucci, C, Lamba, D, Grazulis, S, Manakova, E, Heumann, H. 登録日 2004-09-02 公開日 2005-10-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.92 Å) 主引用文献 Crystal structure of wild-type chaperonin GroEL J.Mol.Biol., 354, 2005
1XCL	Guanidinoacetate methyltransferase containing S-adenosylhomocysteine and guanidine 分子名称: GUANIDINE, Guanidinoacetate N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 Komoto, J, Yamada, T, Takata, Y, Takusagawa, F. 登録日 2004-09-02 公開日 2004-12-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Catalytic mechanism of guanidinoacetate methyltransferase: crystal structures of guanidinoacetate methyltransferase ternary complexes. Biochemistry, 43, 2004
1XCM	Crystal structure of the GppNHp-bound H-Ras G60A mutant 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Transforming protein p21/H-Ras-1 著者 Ford, B, Nassar, N. 登録日 2004-09-02 公開日 2005-05-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Crystal structure of the GppNHp-bound form of the RasG60A mutant To be Published
1XCO	Crystal Structure of a Phosphotransacetylase from Bacillus subtilis in complex with acetylphosphate 分子名称: ACETYLPHOSPHATE, Phosphate acetyltransferase, SULFATE ION 著者 Xu, Q.S, Jancarik, J, Lou, Y, Yokota, H, Adams, P, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC) 登録日 2004-09-02 公開日 2004-12-07 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Crystal structures of a phosphotransacetylase from Bacillus subtilis and its complex with acetyl phosphate J.STRUCT.FUNCT.GENOM., 6, 2005
1XCP	Crystal Structure of the Nitrogenase Fe protein Phe135Trp with MgADP bound 分子名称: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ... 著者 Jeong, M.S, Jang, S.B. 登録日 2004-09-02 公開日 2005-03-15 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural basis for the changes in redox potential in the nitrogenase Phe135Trp Fe protein with MgADP Bound Mol.Cell, 18, 2004
1XCQ	Complex HCV core-Fab 19D9D6-Protein L mutant (D55A,L57H,Y64W) in space group P21 分子名称: Capsid protein C, Monoclonal antibody 19D9D6 Heavy chain, Monoclonal antibody 19D9D6 Light chain, ... 著者 Menez, R, Housden, N.G, Harrison, S, Jolivet-Reynaud, C, Gore, M.G, Stura, E.A. 登録日 2004-09-03 公開日 2005-05-31 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Different crystal packing in Fab-protein L semi-disordered peptide complex. Acta Crystallogr.,Sect.D, 61, 2005
1XCR	Crystal Structure of Longer Splice Variant of PTD012 from Homo sapiens reveals a novel Zinc-containing fold 分子名称: ACETIC ACID, ZINC ION, hypothetical protein PTD012 著者 Manjasetty, B.A, Fieber-Erdmann, M, Roske, Y, Goetz, F, Buessow, K, Heinemann, U. 登録日 2004-09-03 公開日 2005-09-27 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of Homo sapiens PTD012 reveals a zinc-containing hydrolase fold Protein Sci., 15, 2006
1XCS	structure of oligonucleotide/drug complex 分子名称: 5'-D(*CP*GP*TP*AP*CP*G)-3', 9-[(5-(ACETYLAMINO)-6-{[(1S,4R)-8-AMINO-4-[((2R)-6-AMINO-2-{2-[(1S)-5-AMINO-1-FORMYLPENTYL]HYDRAZINO}HEXANOYL)AMINO]-1-(4-AMINOBUTYL)-2,3-DIOXOOCTYL]AMINO}-6-OXOHEXYL)AMINO]-6-CHLORO-2-METHOXYACRIDINIUM, BARIUM ION, ... 著者 Valls, N, Steiner, R.A, Wright, G, Murshudov, G.N, Subirana, J.A. 登録日 2004-09-03 公開日 2005-07-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Variable role of ions in two drug intercalation complexes of DNA J.Biol.Inorg.Chem., 10, 2005
1XCT	Complex HCV core-Fab 19D9D6-Protein L mutant (D55A, L57H, Y64W) in space group P21212 分子名称: Capsid protein C, Monoclonal antibody 19D9D6 Heavy chain, Monoclonal antibody 19D9D6 Light chain, ... 著者 Menez, R, Housden, N.G, Harrison, S, Jolivet-Reynaud, C, Gore, M.G, Stura, E.A. 登録日 2004-09-03 公開日 2005-05-31 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Different crystal packing in Fab-protein L semi-disordered peptide complex. Acta Crystallogr.,Sect.D, 61, 2005
1XCU	oligonucleotid/drug complex 分子名称: 1,5-BIS[3-(DIETHYLAMINO)PROPIONAMIDO]ANTHRACENE-9,10-DIONE, 5'-D(*CP*GP*TP*AP*CP*G)-3', BARIUM ION, ... 著者 Valls, N, Steiner, R.A, Wright, G, Murshudov, G.N, Subirana, J.A. 登録日 2004-09-03 公開日 2005-07-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Variable role of ions in two drug intercalation complexes of DNA J.Biol.Inorg.Chem., 10, 2005
1XCV	Crystal Structure Of (H79AC102D)Dtxr complexed with Nickel(II) 分子名称: Diphtheria toxin repressor mutant, NICKEL (II) ION 著者 D'aquino, J.A, Ringe, D. 登録日 2004-09-03 公開日 2005-08-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mechanism of metal ion activation of the diphtheria toxin repressor DtxR. Proc.Natl.Acad.Sci.USA, 102, 2005
1XCW	Acarbose Rearrangement Mechanism Implied by the Kinetic and Structural Analysis of Human Pancreatic alpha-Amylase in Complex with Analogues and Their Elongated Counterparts 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-amylase, ... 著者 Li, C, Begum, A, Numao, S, Park, K.H, Withers, S.G, Brayer, G.D. 登録日 2004-09-03 公開日 2004-12-07 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Acarbose Rearrangement Mechanism Implied by the Kinetic and Structural Analysis of Human Pancreatic alpha-Amylase in Complex with Analogues and Their Elongated Counterparts Biochemistry, 44, 2005
1XCX	Acarbose Rearrangement Mechanism Implied by the Kinetic and Structural Analysis of Human Pancreatic alpha-Amylase in Complex with Analogues and Their Elongated Counterparts 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-beta-D-glucopyranose, Alpha-amylase, ... 著者 Li, C, Begum, A, Numao, S, Park, K.H, Withers, S.G, Brayer, G.D. 登録日 2004-09-03 公開日 2004-12-07 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Acarbose Rearrangement Mechanism Implied by the Kinetic and Structural Analysis of Human Pancreatic alpha-Amylase in Complex with Analogues and Their Elongated Counterparts Biochemistry, 44, 2005
1XCY	Structure of DNA containing the alpha-anomer of a carbocyclic abasic site 分子名称: 5'-D(*CP*GP*TP*AP*CP*(DXD)P*CP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*GP*AP*GP*TP*AP*CP*G)-3' 著者 de los Santos, C, El-khateeb, M, Rege, P, Tian, K, Johnson, F. 登録日 2004-09-03 公開日 2004-10-19 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Impact of the C1 configuration of abasic sites on DNA duplex structure Biochemistry, 43, 2004

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