PDB: 98041 件ウェブページステータス検索Chemie searchBIRD

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1MWL	Crystal structure of geneticin bound to the eubacterial 16S rRNA A site 分子名称: 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3', GENETICIN 著者 Vicens, Q, Westhof, E. 登録日 2002-09-30 公開日 2003-02-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of geneticin bound to a bacterial 16S ribosomal RNA A site oligonucleotide J.Mol.Biol., 326, 2003
2F43	Rat liver F1-ATPase 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase alpha chain, ... 著者 Chen, C, Saxena, A.K, Simcoke, W.N, Garboczi, D.N, Pedersen, P.L, Ko, Y.H. 登録日 2005-11-22 公開日 2006-03-07 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Mitochondrial ATP synthase: Crystal structure of the catalytic F1 unit in a vanadate-induced transition-like state and implications for mechanism. J.Biol.Chem., 281, 2006
3WNM	D308A mutant of Bacillus circulans T-3040 cycloisomaltooligosaccharide glucanotransferase complexed with isomaltoheptaose 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Cycloisomaltooligosaccharide glucanotransferase, ... 著者 Suzuki, N, Fujimoto, Z, Kim, Y.M, Momma, M, Kishine, N, Suzuki, R, Suzuki, S, Kitamura, S, Kobayashi, M, Kimura, A, Funane, K. 登録日 2013-12-10 公開日 2014-02-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural elucidation of the cyclization mechanism of alpha-1,6-glucan by Bacillus circulans T-3040 cycloisomaltooligosaccharide glucanotransferase. J.Biol.Chem., 289, 2014
2PNM	Crystal Structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P6122 分子名称: Protease VP4 著者 Paetzel, M, Lee, J, Feldman, A.R, Delmas, B. 登録日 2007-04-24 公開日 2007-06-05 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the VP4 protease from infectious pancreatic necrosis virus reveals the acyl-enzyme complex for an intermolecular self-cleavage reaction. J.Biol.Chem., 282, 2007
1MWJ	Crystal Structure of a MUG-DNA pseudo substrate complex 分子名称: 5'-D(*CP*GP*CP*GP*A*GP*(DU)P*TP*CP*GP*CP*G)-3', G/U mismatch-specific DNA glycosylase 著者 Barrett, T.E, Scharer, O, Savva, R, Brown, T, Jiricny, J, Verdine, G.L, Pearl, L.H. 登録日 2002-09-30 公開日 2002-10-11 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Crystal Structure of a thwarted mismatch glycosylase DNA repair complex Embo J., 18, 1999
1TK8	T7 DNA polymerase ternary complex with 8 oxo guanosine and dAMP at the elongation site 分子名称: 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(*CP*CP*CP*AP*(8OG)P*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', ... 著者 Brieba, L.G, Eichman, B.F, Kokoska, R.J, Doublie, S, Kunkel, T.A, Ellenberger, T. 登録日 2004-06-08 公開日 2004-08-31 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase. Embo J., 23, 2004
4BA6	High Resolution structure of the C-terminal family 65 Carbohydrate Binding Module (CBM65B) of endoglucanase Cel5A from Eubacterium cellulosolvens 分子名称: Endoglucanase cel5A, GLYCEROL 著者 Venditto, I, Luis, A.S, Basle, A, Temple, M, Ferreira, L.M.A, Fontes, C.M.G.A, Gilbert, H.J, Najmudin, S. 登録日 2012-09-11 公開日 2012-12-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Understanding how noncatalytic carbohydrate binding modules can display specificity for xyloglucan. J. Biol. Chem., 288, 2013
2OZA	Structure of p38alpha complex 分子名称: MAP kinase-activated protein kinase 2, Mitogen-activated protein kinase 14 著者 White, A, Pargellis, C.A, Studts, J.M, Werneburg, B.G, Farmer II, B.T. 登録日 2007-02-25 公開日 2007-04-03 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Molecular basis of MAPK-activated protein kinase 2:p38 assembly Proc.Natl.Acad.Sci.Usa, 104, 2007
4B8E	PRY-SPRY domain of Trim25 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, E3 UBIQUITIN/ISG15 LIGASE TRIM25 著者 Kershaw, N.J, D'Cruz, A.A, Nicola, N.A, Nicholson, S.E, Babon, J.J. 登録日 2012-08-27 公開日 2013-09-04 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.779 Å) 主引用文献 Crystal Structure of the Trim25 B30.2 (Pryspry) Domain: A Key Component of Antiviral Signaling. Biochem.J., 456, 2013
3S20	Crystal structure of cerulenin bound Xanthomonas campestri OleA (soak) 分子名称: (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE, 3-oxoacyl-[ACP] synthase III, ... 著者 Goblirsch, B.R, Wilmot, C.M. 登録日 2011-05-16 公開日 2012-05-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.8796 Å) 主引用文献 Crystal Structures of Xanthomonas campestris OleA Reveal Features That Promote Head-to-Head Condensation of Two Long-Chain Fatty Acids. Biochemistry, 51, 2012
1M46	CRYSTAL STRUCTURE OF MLC1P BOUND TO IQ4 OF MYO2P, A CLASS V MYOSIN 分子名称: IQ4 Motif from MYO2P, A Class V Myosin, Myosin light chain 著者 Terrak, M, Dominguez, R. 登録日 2002-07-02 公開日 2002-11-27 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.103 Å) 主引用文献 Two distinct myosin light chain structures are induced by specific variations within the bound IQ motifs-functional implications Embo J., 22, 2003
1M4I	Aminoglycoside 2'-N-acetyltransferase from Mycobacterium tuberculosis-Complex with Coenzyme A and Kanamycin A 分子名称: 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, Aminoglycoside 2'-N-acetyltransferase, COENZYME A, ... 著者 Vetting, M.W, Hegde, S.S, Javid-Majd, F, Blanchard, J.S, Roderick, S.L. 登録日 2002-07-02 公開日 2002-08-28 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Aminoglycoside 2'-N-acetyltransferase from Mycobacterium tuberculosis in complex with coenzyme A and aminoglycoside substrates. Nat.Struct.Biol., 9, 2002
3WV1	Crystal structure of the catalytic domain of MMP-13 complexed with 4-(2-((6-fluoro-2-((3-methoxybenzyl)carbamoyl)-4-oxo-3,4-dihydroquinazolin-5-yl)oxy)ethyl)benzoic acid 分子名称: 4-[2-({6-fluoro-2-[(3-methoxybenzyl)carbamoyl]-4-oxo-3,4-dihydroquinazolin-5-yl}oxy)ethyl]benzoic acid, CALCIUM ION, Collagenase 3, ... 著者 Oki, H, Tanaka, Y. 登録日 2014-05-12 公開日 2015-05-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Discovery of novel, highly potent, and selective quinazoline-2-carboxamide-based matrix metalloproteinase (MMP)-13 inhibitors without a zinc binding group using a structure-based design approach J.Med.Chem., 57, 2014
1M4G	Aminoglycoside 2'-N-acetyltransferase from Mycobacterium tuberculosis-Complex with Coenzyme A and Ribostamycin 分子名称: 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, Aminoglycoside 2'-N-acetyltransferase, COENZYME A, ... 著者 Vetting, M.W, Hegde, S.S, Javid-Majd, F, Blanchard, J.S, Roderick, S.L. 登録日 2002-07-02 公開日 2002-08-28 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Aminoglycoside 2'-N-acetyltransferase from Mycobacterium tuberculosis in complex with coenzyme A and aminoglycoside substrates. Nat.Struct.Biol., 9, 2002
3UL1	Mouse importin alpha: nucleoplasmin cNLS peptide complex 分子名称: Importin subunit alpha-2, Nucleoplasmin 著者 Marfori, M, Forwood, J.K, Lonhienne, T.G, Kobe, B. 登録日 2011-11-10 公開日 2012-10-03 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Basis of High-Affinity Nuclear Localization Signal Interactions with Importin-alpha Traffic, 13, 2012
1MUU	2.0 A crystal structure of GDP-mannose dehydrogenase 分子名称: GDP-mannose 6-dehydrogenase, GUANOSINE 5'-(TRIHYDROGEN DIPHOSPHATE), P'-D-MANNOPYRANOSYL ESTER, ... 著者 Snook, C.F, Tipton, P.A, Beamer, L.J. 登録日 2002-09-24 公開日 2003-05-06 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Crystal structure of GDP-mannose dehydrogenase: A key enzyme of alginate biosynthesis in P. aeruginosa Biochemistry, 42, 2003
3WLB	HLA-A24 in complex with HIV-1 Nef126-10(8T10F) 分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-24 alpha chain, ... 著者 Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A, Han, C. 登録日 2013-11-08 公開日 2014-06-11 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Switching and emergence of CTL epitopes in HIV-1 infection Retrovirology, 11, 2014
1MU9	Crystal Structure of a Human Tyrosyl-DNA Phosphodiesterase (Tdp1)-Vanadate Complex 分子名称: GLYCEROL, Tyrosyl-DNA Phosphodiesterase, VANADATE ION 著者 Davies, D.R, Interthal, H, Champoux, J.J, Hol, W.G.J. 登録日 2002-09-23 公開日 2003-01-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Insights Into Substrate Binding and Catalytic Mechanism of Human Tyrosyl-DNA Phosphodiesterase (Tdp1) from Vanadate- and Tungstate-Inhibited Structures J.Mol.Biol., 324, 2002
1N3J	Structure and Substrate of a Histone H3 Lysine Methyltransferase from Paramecium Bursaria Chlorella Virus 1 分子名称: Histone H3 Lysine Methyltransferase 著者 Manzur, K.L, Farooq, A, Zeng, L, Plotnikova, O, Sachchidanand, Koch, A.W, Zhou, M.-M. 登録日 2002-10-28 公開日 2003-01-28 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A dimeric viral SET domain methyltransferase specific to Lys27 of histone H3. Nat.Struct.Biol., 10, 2003
4C29	Crystal Structure of High-Affinity von Willebrand Factor A1 domain with Disulfide Mutation 分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Blenner, M.A, Dong, X, Springer, T.A. 登録日 2013-08-16 公開日 2014-01-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.202 Å) 主引用文献 Towards the Structural Basis of Regulation of Von Willebrand Factor Binding to Glycoprotein Ib J.Biol.Chem., 289, 2014
1IG9	Structure of the Replicating Complex of a Pol Alpha Family DNA Polymerase 分子名称: 5'-D(*AP*CP*AP*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*(DOC))-3', CALCIUM ION, ... 著者 Franklin, M.C, Wang, J, Steitz, T.A. 登録日 2001-04-17 公開日 2001-06-11 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of the Replicating Complex of a Pol Alpha Family DNA Polymerase Cell(Cambridge,Mass.), 105, 2001
1J1U	Crystal structure of archaeal tyrosyl-tRNA synthetase complexed with tRNA(Tyr) and L-tyrosine 分子名称: MAGNESIUM ION, TYROSINE, Tyrosyl-tRNA synthetase, ... 著者 Kobayashi, T, Nureki, O, Ishitani, R, Tukalo, M, Cusack, S, Sakamoto, K, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-12-17 公開日 2003-06-03 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural basis for orthogonal tRNA specificities of tyrosyl-tRNA synthetases for genetic code expansion NAT.STRUCT.BIOL., 10, 2003
4C2B	Crystal Structure of High-Affinity von Willebrand Factor A1 domain with Disulfide Mutation in Complex with High Affinity GPIb alpha 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, PLATELET GLYCOPROTEIN IB ALPHA CHAIN, ... 著者 Blenner, M.A, Dong, X, Springer, T.A. 登録日 2013-08-16 公開日 2014-01-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Towards the Structural Basis of Regulation of Von Willebrand Factor Binding to Glycoprotein Ib J.Biol.Chem., 289, 2014
1IYU	LIPOYL DOMAIN OF PYRUVATE DEHYDROGENASE COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE 分子名称: DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX 著者 Berg, A, Vervoort, J, De Kok, A. 登録日 1996-09-25 公開日 1997-03-12 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Three-dimensional structure in solution of the N-terminal lipoyl domain of the pyruvate dehydrogenase complex from Azotobacter vinelandii. Eur.J.Biochem., 244, 1997
4CBS	X-ray structure of quintuple mutant of human alanine glyoxylate aminotransferase, AGXT_RHEAM 分子名称: PYRIDOXAL-5'-PHOSPHATE, SERINE--PYRUVATE AMINOTRANSFERASE 著者 Yunta, C, Albert, A. 登録日 2013-10-16 公開日 2014-07-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The Consensus-Based Approach for Gene/Enzyme Replacement Therapies and Crystallization Strategies: The Case of Human Alanine:Glyoxylate Aminotransferase. Biochem.J., 462, 2014

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