PDB: 184427 件ウェブページステータス検索Chemie searchBIRD

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5FG5	Crystal structure of the bromodomain of human BRPF1 in complex with PFI-4 chemical probe 分子名称: NITRATE ION, Peregrin, ~{N}-(1,3-dimethyl-2-oxidanylidene-6-pyrrolidin-1-yl-benzimidazol-5-yl)-2-methoxy-benzamide 著者 Tallant, C, Owen, D.R, Gerstenberger, B.S, Savitsky, P, Chaikuad, A, Fedorov, O, Nunez-Alonso, G, Filippakopoulos, P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Muller, S, Brennan, P.E, Knapp, S. 登録日 2015-12-20 公開日 2015-12-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of the bromodomain of human BRPF1 in complex with PFI-4 chemical probe To Be Published
4PGK	Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound 分子名称: 11-[2-(2-ethoxyethoxy)ethoxy]undecanal, Aldehyde decarbonylase, FE (III) ION 著者 Buer, B.C, Paul, B, Das, D, Stuckey, J.A, Marsh, E.N.G. 登録日 2014-05-02 公開日 2014-12-24 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Insights into substrate and metal binding from the crystal structure of cyanobacterial aldehyde deformylating oxygenase with substrate bound. Acs Chem.Biol., 9, 2014
4NAY	Crystal Structure of FosB from Staphylococcus aureus with Zn and Sulfate at 1.42 Angstrom Resolution - SAD Phasing 分子名称: Metallothiol transferase FosB, SULFATE ION, ZINC ION 著者 Thompson, M.K, Goodman, M.C, Jagessar, K, Harp, J, Keithly, M.E, Cook, P.D, Armstrong, R.N. 登録日 2013-10-22 公開日 2014-02-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Structure and Function of the Genomically Encoded Fosfomycin Resistance Enzyme, FosB, from Staphylococcus aureus. Biochemistry, 53, 2014
4NB2	Crystal Structure of FosB from Staphylococcus aureus at 1.89 Angstrom Resolution - Apo structure 分子名称: Metallothiol transferase FosB, SULFATE ION 著者 Cook, P.D, Thompson, M.K, Goodman, M.C, Jagessar, K, Harp, J, Keithly, M.E, Armstrong, R.N. 登録日 2013-10-22 公開日 2014-02-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Structure and Function of the Genomically Encoded Fosfomycin Resistance Enzyme, FosB, from Staphylococcus aureus. Biochemistry, 53, 2014
7V08	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 25S rRNA, 5.8S rRNA, ... 著者 Sekulski, K, Cruz, V.E, Weirich, C.S, Erzberger, J.P. 登録日 2022-05-10 公開日 2023-03-15 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.36 Å) 主引用文献 rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly. Nat Commun, 14, 2023
5FHW	Hen Egg-White Lysozyme (HEWL) complexed with Hf(IV)-substituted Wells Dawson-type polyoxometalate 分子名称: Dawson-type polyoxometalate, Lysozyme C, POTASSIUM ION 著者 Vandebroek, L, De Zitter, E, Van Meervelt, L. 登録日 2015-12-22 公開日 2017-01-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Structural Characterization of the Complex between Hen Egg- White Lysozyme and HfIV-Substituted Wells Dawson Polyoxometalate as Artificial Protease To Be Published
1A1U	SOLUTION STRUCTURE DETERMINATION OF A P53 MUTANT DIMERIZATION DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE 分子名称: P53 著者 Mccoy, M.A, Stavridi, E.S, Waterman, J.L.F, Wieczorek, A, Opella, S.J, Halezonetis, T.D. 登録日 1997-12-16 公開日 1998-04-08 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Hydrophobic side-chain size is a determinant of the three-dimensional structure of the p53 oligomerization domain. EMBO J., 16, 1997
7UEP	PANK3 complex structure with compound PZ-3860 分子名称: 1,2-ETHANEDIOL, 1-[(2R)-4-(6-chloropyridazin-3-yl)-2-methylpiperazin-1-yl]-2-(4-cyclopropylphenyl)ethan-1-one, MAGNESIUM ION, ... 著者 White, S.W, Yun, M, Lee, R.E. 登録日 2022-03-22 公開日 2023-03-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published
5QR1	PanDDA analysis group deposition -- Crystal Structure of human ALAS2A in complex with Z396380540 分子名称: 5-aminolevulinate synthase, erythroid-specific, mitochondrial, ... 著者 Bezerra, G.A, Foster, W, Bailey, H, Shrestha, L, Krojer, T, Talon, R, Brandao-Neto, J, Douangamath, A, Nicola, B.B, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Brennan, P.E, Yue, W.W. 登録日 2019-05-22 公開日 2019-08-07 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 PanDDA analysis group deposition To Be Published
7UEO	PANK3 complex structure with compound PZ-3977 分子名称: 1,2-ETHANEDIOL, 6-{4-[(4-cyclopropyl-2-fluorophenyl)acetyl]piperazin-1-yl}pyridazine-3-carbonitrile, MAGNESIUM ION, ... 著者 White, S.W, Yun, M, Lee, R.E. 登録日 2022-03-22 公開日 2023-03-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published
1KW6	Crystal structure of 2,3-dihydroxybiphenyl dioxygenase (BphC) in complex with 2,3-dihydroxybiphenyl at 1.45 A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2,3-Dihydroxybiphenyl dioxygenase, BIPHENYL-2,3-DIOL, ... 著者 Sato, N, Uragami, Y, Nishizaki, T, Takahashi, Y, Sazaki, G, Sugimoto, K, Nonaka, T, Masai, E, Fukuda, M, Senda, T. 登録日 2002-01-28 公開日 2003-01-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal Structures of the Reaction Intermediate and its Homologue of an Extradiol-cleaving Catecholic Dioxygenase J.Mol.Biol., 321, 2002
5FLY	The FhuD protein from S.pseudintermedius 分子名称: 2,5,8,11,14,17,20,23-OCTAOXAPENTACOSAN-25-OL, CADMIUM ION, CHLORIDE ION, ... 著者 Malito, E. 登録日 2015-10-29 公開日 2015-12-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.598 Å) 主引用文献 Crystal Structure of Fhud at 1.6 Angstrom Resolution: A Ferrichrome-Binding Protein from the Animal and Human Pathogen Staphylococcus Pseudintermedius Acta Crystallogr.,Sect.F, 72, 2016
1KDD	X-ray structure of the coiled coil GCN4 ACID BASE HETERODIMER ACID-d12La16I BASE-d12La16L 分子名称: GCN4 ACID BASE HETERODIMER ACID-d12La16I, GCN4 ACID BASE HETERODIMER BASE-d12La16L 著者 Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S. 登録日 2001-11-12 公開日 2001-11-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils. Proc.Natl.Acad.Sci.USA, 98, 2001
2FGP	Crystal structure of a minimal, all RNA hairpin ribozyme with modifications (g8dap, u39c) at ph 8.6 分子名称: 5'-R(*CP*GP*GP*UP*GP*AP*(N6G)P*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*AP*GP*UP*CP*CP*AP*CP*CP*G)-3', ... 著者 Salter, J.D, Wedekind, J.E. 登録日 2005-12-22 公開日 2006-02-14 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer. Biochemistry, 45, 2006
1AN2	RECOGNITION BY MAX OF ITS COGNATE DNA THROUGH A DIMERIC B/HLH/Z DOMAIN 分子名称: DNA (5'-D(*GP*TP*GP*TP*AP*GP*GP*TP*CP*AP*CP*GP*TP*GP*AP*CP*C P*TP*AP*CP*AP*C)- 3'), PROTEIN (TRANSCRIPTION FACTOR MAX (TF MAX)) 著者 Ferre-D'Amare, A.R, Prendergast, G.C, Ziff, E.B, Burley, S.K. 登録日 1996-09-06 公開日 1997-09-17 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain. Nature, 363, 1993
1QTE	CRYSTAL STRUCTURE OF THE 70 KDA SOLUBLE LYTIC TRANSGLYCOSYLASE SLT70 FROM ESCHERICHIA COLI AT 1.90 A RESOLUTION IN COMPLEX WITH A 1,6-ANHYDROMUROTRIPEPTIDE 分子名称: 2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... 著者 van Asselt, E.J, Thunnissen, A.-M.W.H, Dijkstra, B.W. 登録日 1999-06-27 公開日 1999-08-31 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 High resolution crystal structures of the Escherichia coli lytic transglycosylase Slt70 and its complex with a peptidoglycan fragment. J.Mol.Biol., 291, 1999
1NOK	COMPLEX OF GLYCOGEN PHOSPHORYLASE WITH A TRANSITION STATE ANALOGUE NOJIRIMYCIN TETRAZOLE AND PHOSPHATE IN THE T STATE 分子名称: GLYCOGEN PHOSPHORYLASE, NOJIRIMYCINE TETRAZOLE, PYRIDOXAL-5'-PHOSPHATE 著者 Johnson, L.N, Mitchell, E.P. 登録日 1996-03-12 公開日 1996-07-11 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Ternary complex crystal structures of glycogen phosphorylase with the transition state analogue nojirimycin tetrazole and phosphate in the T and R states. Biochemistry, 35, 1996
1YD6	Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Bacillus caldotenax 分子名称: CHLORIDE ION, SULFATE ION, UvrC 著者 Truglio, J.J, Rhau, B, Croteau, D.L, Wang, L, Skorvaga, M, Karakas, E, DellaVecchia, M.J, Wang, H, Van Houten, B, Kisker, C. 登録日 2004-12-23 公開日 2005-03-01 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural insights into the first incision reaction during nucleotide excision repair Embo J., 24, 2005
7UE4	PANK3 complex structure with compound PZ-3855 分子名称: 1,2-ETHANEDIOL, 1-[4-(6-chloropyridazin-3-yl)piperazin-1-yl]-2-(4-cyclopropylphenyl)ethan-1-one, ACETATE ION, ... 著者 White, S.W, Yun, M, Lee, R.E. 登録日 2022-03-21 公開日 2023-03-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published
5FOX	HUMANISED MONOMERIC RADA IN COMPLEX WITH FHAA TETRAPEPTIDE 分子名称: DNA REPAIR AND RECOMBINATION PROTEIN RADA, FHAA PEPTIDE, GLYCEROL, ... 著者 Scott, D.E, Marsh, M, Blundell, T.L, Abell, C, Hyvonen, M. 登録日 2015-11-26 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structure Activity Relationship of the Peptide Binding Motif Mediating the Rad51:Brca2 Protein-Protein Interaction. FEBS Lett., 590, 2016
7UE3	PANK3 complex structure with compound PZ-3804 分子名称: 1,2-ETHANEDIOL, 6-[4-({4-[(2R)-1-hydroxypropan-2-yl]phenyl}acetyl)piperazin-1-yl]pyridazine-3-carbonitrile, MAGNESIUM ION, ... 著者 White, S.W, Yun, M, Lee, R.E. 登録日 2022-03-21 公開日 2023-03-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published
4CA7	Drosophila Angiotensin converting enzyme (AnCE) in complex with a phosphinic tripeptide FI 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANGIOTENSIN-CONVERTING ENZYME, N-{(2S)-3-[(S)-[(1R)-1-{[(benzyloxy)carbonyl]amino}-2-phenylethyl](hydroxy)phosphoryl]-2-[(3-phenyl-1,2-oxazol-5-yl)methyl]propanoyl}-L-tyrosine, ... 著者 Masuyer, G, Akif, M, Czarny, B, Beau, F, Schwager, S.L.U, Sturrock, E.D, Isaac, R.E, Dive, V, Acharya, K.R. 登録日 2013-10-07 公開日 2013-12-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Crystal Structures of Highly Specific Phosphinic Tripeptide Enantiomers in Complex with the Angiotensin-I Converting Enzyme. FEBS J., 281, 2014
4MQ9	Crystal structure of Thermus thermophilus RNA polymerase holoenzyme in complex with GE23077 分子名称: (2Z)-2-methylbut-2-enoic acid, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Ho, M.X, Arnold, E, Ebright, R.H, Zhang, Y, Tuske, S. 登録日 2013-09-16 公開日 2014-05-07 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides. Elife, 3, 2014
7LBF	CryoEM structure of the HCMV Trimer gHgLgO in complex with human Platelet-derived growth factor receptor alpha and neutralizing fabs 13H11 and MSL-109 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein H, ... 著者 Kschonsak, M, Rouge, L, Arthur, C.P, Hoangdung, H, Patel, N, Kim, I, Johnson, M, Kraft, E, Rohou, A.L, Gill, A, Martinez-Martin, N, Payandeh, J, Ciferri, C. 登録日 2021-01-07 公開日 2021-03-10 最終更新日 2021-03-17 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structures of HCMV Trimer reveal the basis for receptor recognition and cell entry. Cell, 184, 2021
7UE5	PANK3 complex structure with compound PZ-3741 分子名称: 6-[4-({4-[(2R)-1,1,1-trifluoropropan-2-yl]phenyl}acetyl)piperazin-1-yl]pyridazine-3-carbonitrile, 6-[4-({4-[(2S)-1,1,1-trifluoropropan-2-yl]phenyl}acetyl)piperazin-1-yl]pyridazine-3-carbonitrile, MAGNESIUM ION, ... 著者 White, S.W, Yun, M, Lee, R.E. 登録日 2022-03-21 公開日 2023-03-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published

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