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PDB: 20 件
8ESE
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BU of 8ese by Molmil
Crystal structure of human Vps29 bound to a peptide from Vps35L
分子名称: VPS35 endosomal protein-sorting factor-like, Vacuolar protein sorting-associated protein 29
著者Healy, M.D, Collins, B.M.
登録日2022-10-13
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structure of the endosomal Commander complex linked to Ritscher-Schinzel syndrome.
Cell, 186, 2023
5GTU
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BU of 5gtu by Molmil
Structural and mechanistic insights into regulation of the retromer coat by TBC1d5
分子名称: TBC1 domain family member 5, Vacuolar protein sorting-associated protein 29
著者Jia, D, Rosen, M.
登録日2016-08-23
公開日2016-12-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and mechanistic insights into regulation of the retromer coat by TBC1d5
Nat Commun, 7, 2016
6XS7
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BU of 6xs7 by Molmil
Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-D2
分子名称: 48V-DTY-THR-THR-ILE-TYR-TRP-THR-PRO-LEU-GLY-THR-PHE-PRO-ARG-ILE-ARG, FORMIC ACID, GLYCEROL, ...
著者Chen, K.-E, Guo, Q, Collins, B.M.
登録日2020-07-15
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献De novo macrocyclic peptides for inhibiting, stabilizing, and probing the function of the retromer endosomal trafficking complex.
Sci Adv, 7, 2021
6XSA
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Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-L2
分子名称: 48V-TYR-LEU-PRO-THR-ILE-THR-GLY-VAL-GLY-HIS-LEU-TRP-HIS-PRO-LEU, SULFATE ION, Vacuolar protein sorting-associated protein 29
著者Chen, K.-E, Guo, Q, Collins, B.M.
登録日2020-07-15
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献De novo macrocyclic peptides for inhibiting, stabilizing, and probing the function of the retromer endosomal trafficking complex.
Sci Adv, 7, 2021
6XS5
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Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-D1
分子名称: 48V-DTY-ILE-ILE-ASP-THR-PRO-LEU-GLY-VAL-PHE-LEU-SER-SER-LEU-LYS-ARG, FORMIC ACID, GLYCEROL, ...
著者Chen, K.-E, Guo, Q, Collins, B.M.
登録日2020-07-15
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献De novo macrocyclic peptides for inhibiting, stabilizing, and probing the function of the retromer endosomal trafficking complex.
Sci Adv, 7, 2021
1W24
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BU of 1w24 by Molmil
Crystal Structure Of human Vps29
分子名称: VACUOLAR PROTEIN SORTING PROTEIN 29
著者Wang, D, Guo, M, Teng, M, Niu, L.
登録日2004-06-26
公開日2005-03-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Human Vacuolar Protein Sorting Protein 29 Reveals a Phosphodiesterase/Nuclease-Like Fold and Two Protein-Protein Interaction Sites.
J.Biol.Chem., 280, 2005
8R0J
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BU of 8r0j by Molmil
Crystal structure of the retromer complex VPS29/VPS35 with the ligand bis-1,3-phenyl guanylhydrazone, 2a
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bis-1,3-phenyl guanylhydrazon, Vacuolar protein sorting-associated protein 29, ...
著者Milani, M, Fagnani, E.
登録日2023-10-31
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Stabilization of the retromer complex: Analysis of novel binding sites of bis-1,3-phenyl guanylhydrazone 2a to the VPS29/VPS35 interface.
Comput Struct Biotechnol J, 23, 2024
5WYH
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Crystal structure of RidL(1-200) complexed with VPS29
分子名称: GLYCEROL, Interaptin, Vacuolar protein sorting-associated protein 29
著者Yao, J, Sun, Q, Jia, D.
登録日2017-01-13
公開日2018-01-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Mechanism of inhibition of retromer transport by the bacterial effector RidL.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8R02
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Crystal structure of the retromer complex VPS29/VPS35 with the ligand bis-1,3-phenyl guanylhydrazone, 2a
分子名称: Bis-1,3-phenyl guanylhydrazon, Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35
著者Milani, M, Fagnani, E.
登録日2023-10-30
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Stabilization of the retromer complex: Analysis of novel binding sites of bis-1,3-phenyl guanylhydrazone 2a to the VPS29/VPS35 interface.
Comput Struct Biotechnol J, 23, 2024
5OSI
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BU of 5osi by Molmil
Structure of retromer VPS29-VPS35C subunits complexed with RidL harpin loop (163-176)
分子名称: 1,2-ETHANEDIOL, Interaptin, SODIUM ION, ...
著者Romano-Moreno, M, Rojas, A.L, Lucas, M, Isupov, M.N, Hierro, A.
登録日2017-08-17
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Molecular mechanism for the subversion of the retromer coat by the Legionella effector RidL.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6XS9
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BU of 6xs9 by Molmil
Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-L1
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 48V-TYR-ILE-LYS-THR-PRO-LEU-GLY-THR-PHE-PRO-ASN-ARG-HIS-GLY, GLYCEROL, ...
著者Chen, K.-E, Guo, Q, Collins, B.M.
登録日2020-07-15
公開日2021-07-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献De novo macrocyclic peptides for inhibiting, stabilizing, and probing the function of the retromer endosomal trafficking complex.
Sci Adv, 7, 2021
2R17
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BU of 2r17 by Molmil
Functional architecture of the retromer cargo-recognition complex
分子名称: GLYCEROL, Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35
著者Hierro, A, Rojas, A.L, Rojas, R, Murthy, N, Effantin, G, Kajava, A.V, Steven, A.C, Bonifacino, J.S, Hurley, J.H.
登録日2007-08-22
公開日2007-10-30
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Functional architecture of the retromer cargo-recognition complex.
Nature, 449, 2007
8SYN
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BU of 8syn by Molmil
Human VPS35L/VPS29/VPS26C Complex
分子名称: VPS35 endosomal protein-sorting factor-like, Vacuolar protein sorting-associated protein 26C, Vacuolar protein sorting-associated protein 29
著者Chen, Z, Chen, B, Burstein, E, Han, Y.
登録日2023-05-25
公開日2023-11-01
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Structural organization of the retriever-CCC endosomal recycling complex.
Nat.Struct.Mol.Biol., 31, 2024
8SYO
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BU of 8syo by Molmil
Human Retriever VPS35L/VPS29/VPS26C Complex (Composite Map)
分子名称: VPS35 endosomal protein-sorting factor-like, Vacuolar protein sorting-associated protein 26C, Vacuolar protein sorting-associated protein 29
著者Chen, Z, Chen, B, Burstein, E, Han, Y.
登録日2023-05-25
公開日2023-11-01
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Structural organization of the retriever-CCC endosomal recycling complex.
Nat.Struct.Mol.Biol., 31, 2024
8RKS
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BU of 8rks by Molmil
Structure of VPS29-VPS35 bound to the LFa motif R21 of Fam21.
分子名称: Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35, WASH complex subunit 2A
著者Romano-Moreno, M, Astorga-Simon, E.N, Rojas, A.L, Hierro, A.
登録日2023-12-30
公開日2024-04-24
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Retromer-mediated recruitment of the WASH complex involves discrete interactions between VPS35, VPS29, and FAM21.
Protein Sci., 33, 2024
8SYM
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BU of 8sym by Molmil
Human VPS29/VPS35L Complex (Locally refined map)
分子名称: VPS35 endosomal protein-sorting factor-like, Vacuolar protein sorting-associated protein 29
著者Chen, Z, Chen, B, Burstein, E, Han, Y.
登録日2023-05-25
公開日2023-11-01
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural organization of the retriever-CCC endosomal recycling complex.
Nat.Struct.Mol.Biol., 31, 2024
5OSH
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BU of 5osh by Molmil
Structure of retromer VPS29-VPS35C subunits complexed with RidL N-terminal domain (1-236)
分子名称: Interaptin, Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35
著者Romano-Moreno, M, Rojas, A.L, Lucas, M, Isupov, M.N, Hierro, A.
登録日2017-08-17
公開日2017-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Molecular mechanism for the subversion of the retromer coat by the Legionella effector RidL.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8P0V
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BU of 8p0v by Molmil
Structure of the human Commander complex coiled coils, DENND10 and partial Retriever subcomplex
分子名称: Coiled-coil domain-containing protein 22, Coiled-coil domain-containing protein 93, DENN domain-containing protein 10, ...
著者Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
登録日2023-05-10
公開日2024-03-20
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 31, 2024
8P0X
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BU of 8p0x by Molmil
Structure of the human Commander complex Retriever Subcomplex
分子名称: Coiled-coil domain-containing protein 22, Coiled-coil domain-containing protein 93, VPS35 endosomal protein-sorting factor-like, ...
著者Kumpula, E.P, Laulumaa, S, Huiskonen, J.T.
登録日2023-05-11
公開日2024-03-20
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献Structure and interactions of the endogenous human Commander complex.
Nat.Struct.Mol.Biol., 31, 2024
7BLN
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BU of 7bln by Molmil
VPS35/VPS29 arch of metazoan membrane-assembled retromer:SNX3 complex modelled with human proteins
分子名称: Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35
著者Leneva, N, Kovtun, O, Morado, D.R, Briggs, J.A.G, Owen, D.J.
登録日2021-01-18
公開日2021-02-10
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Architecture and mechanism of metazoan retromer:SNX3 tubular coat assembly.
Sci Adv, 7, 2021

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