Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 222 件

7BT2
DownloadVisualize
BU of 7bt2 by Molmil
Crystal structure of the SERCA2a in the E2.ATP state
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Kabashima, Y, Ogawa, H, Nakajima, R, Toyoshima, C.
登録日2020-03-31
公開日2020-07-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.00002861 Å)
主引用文献What ATP binding does to the Ca2+pump and how nonproductive phosphoryl transfer is prevented in the absence of Ca2.
Proc.Natl.Acad.Sci.USA, 117, 2020
4HYT
DownloadVisualize
BU of 4hyt by Molmil
Na,K-ATPase in the E2P state with bound ouabain and Mg2+ in the cation-binding site
分子名称: 1-O-decanoyl-beta-D-tagatofuranosyl beta-D-allopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Laursen, M, Yatime, L, Nissen, P, Fedosova, N.U.
登録日2012-11-14
公開日2013-06-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.404 Å)
主引用文献Crystal structure of the high-affinity Na+,K+-ATPase-ouabain complex with Mg2+ bound in the cation binding site.
Proc.Natl.Acad.Sci.USA, 110, 2013
4J2T
DownloadVisualize
BU of 4j2t by Molmil
Inhibitor-bound Ca2+ ATPase
分子名称: (3S,3aR,4S,6S,6aR,7S,8S,9bS)-6-(acetyloxy)-3a,4-bis(butanoyloxy)-3-hydroxy-3,6,9-trimethyl-8-{[(2E)-2-methylbut-2-enoyl]oxy}-2-oxo-2,3,3a,4,5,6,6a,7,8,9b-decahydroazuleno[4,5-b]furan-7-yl octanoate, PHOSPHATIDYLETHANOLAMINE, POTASSIUM ION, ...
著者Paulsen, E.S, Villadsen, J, Tenori, E, Liu, H, Lie, M.A, Bonde, D.F, Bublitz, M, Olesen, C, Autzen, H.E, Dach, I, Sehgal, P, Moller, J.V, Schiott, B, Nissen, P, Christensen, S.B.
登録日2013-02-05
公開日2013-06-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Water-mediated interactions influence the binding of thapsigargin to sarco/endoplasmic reticulum calcium adenosinetriphosphatase.
J.Med.Chem., 56, 2013
1T5T
DownloadVisualize
BU of 1t5t by Molmil
Structure of the (SR)Ca2+-ATPase Ca2-E1-ADP:AlF4- form
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
著者Sorensen, T.L.-M, Moller, J.V, Nissen, P.
登録日2004-05-05
公開日2004-06-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Phosphoryl transfer and calcium ion occlusion in the calcium pump.
Science, 304, 2004
1VFP
DownloadVisualize
BU of 1vfp by Molmil
Crystal structure of the SR CA2+-ATPase with bound AMPPCP
分子名称: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Toyoshima, C, Mizutani, T.
登録日2004-04-18
公開日2004-07-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the calcium pump with a bound ATP analogue.
Nature, 430, 2004
8D3Y
DownloadVisualize
BU of 8d3y by Molmil
Human alpha3 Na+/K+-ATPase in its exoplasmic side-open state
分子名称: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3X
DownloadVisualize
BU of 8d3x by Molmil
Human alpha3 Na+/K+-ATPase in its K+-occluded state
分子名称: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1, ...
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3U
DownloadVisualize
BU of 8d3u by Molmil
Human alpha3 Na+/K+-ATPase in its Na+-occluded state
分子名称: ADENOSINE-5'-DIPHOSPHATE, FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, ...
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3W
DownloadVisualize
BU of 8d3w by Molmil
Human alpha3 Na+/K+-ATPase in its AMPPCP-bound cytoplasmic side-open state
分子名称: FXYD domain-containing ion transport regulator 6, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Sodium/potassium-transporting ATPase subunit alpha-3, ...
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3V
DownloadVisualize
BU of 8d3v by Molmil
Human alpha3 Na+/K+-ATPase in its cytoplasmic side-open state
分子名称: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1
著者Nguyen, P.T, Bai, X.
登録日2022-06-01
公開日2022-09-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
6HEF
DownloadVisualize
BU of 6hef by Molmil
Room temperature structure of the (SR)Ca2+-ATPase Ca2-E1-CaAMPPCP form
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Hjorth-Jensen, S, Sorensen, T.L.M, Oksanen, E, Andersen, J.L, Olesen, C, Moller, J.V, Nissen, P.
登録日2018-08-20
公開日2018-08-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.538 Å)
主引用文献Membrane-protein crystals for neutron diffraction.
Acta Crystallogr D Struct Biol, 74, 2018
6HXB
DownloadVisualize
BU of 6hxb by Molmil
SERCA2a from pig heart
分子名称: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
著者Sitsel, A, Andersen, J.L, Nissen, P, Olesen, C.
登録日2018-10-16
公開日2019-02-27
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structures of the heart specific SERCA2a Ca 2+ -ATPase.
Embo J., 38, 2019
6JJU
DownloadVisualize
BU of 6jju by Molmil
Structure of Ca2+ ATPase
分子名称: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Inoue, M, Sakuta, N, Watanabe, S, Inaba, K.
登録日2019-02-27
公開日2019-05-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis of Sarco/Endoplasmic Reticulum Ca2+-ATPase 2b Regulation via Transmembrane Helix Interplay.
Cell Rep, 27, 2019
6JXI
DownloadVisualize
BU of 6jxi by Molmil
Rb+-bound E2-MgF state of the gastric proton pump (Tyr799Trp)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K, Irie, K.
登録日2019-04-23
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
6JXH
DownloadVisualize
BU of 6jxh by Molmil
K+-bound E2-MgF state of the gastric proton pump (Tyr799Trp)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K, Irie, K.
登録日2019-04-23
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
3W5B
DownloadVisualize
BU of 3w5b by Molmil
Crystal structure of the recombinant SERCA1a (calcium pump of fast twitch skeletal muscle) in the E1.Mg2+ state
分子名称: 2',3'-O-[(1r)-2,4,6-trinitrocyclohexa-2,5-diene-1,1-diyl]adenosine 5'-(dihydrogen phosphate), MAGNESIUM ION, PHOSPHATIDYLETHANOLAMINE, ...
著者Toyoshima, C, Iwasawa, S, Ogawa, H, Hirata, A, Tsueda, J, Inesi, G.
登録日2013-01-27
公開日2013-03-06
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
4XOU
DownloadVisualize
BU of 4xou by Molmil
Crystal structure of the SR Ca2+-ATPase in the Ca2-E1-MgAMPPCP form determined by serial femtosecond crystallography using an X-ray free-electron laser.
分子名称: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
著者Bublitz, M, Nass, K, Drachmann, N.D, Markvardsen, A.J, Gutmann, M.J, Barends, T.R.M, Mattle, D, Shoeman, R.L, Doak, R.B, Boutet, S, Messerschmidt, M, Seibert, M.M, Williams, G.J, Foucar, L, Reinhard, L, Sitsel, O, Gregersen, J.L, Clausen, J.D, Boesen, T, Gotfryd, K, Wang, K.-T, Olesen, C, Moller, J.V, Nissen, P, Schlichting, I.
登録日2015-01-16
公開日2015-06-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural studies of P-type ATPase-ligand complexes using an X-ray free-electron laser.
Iucrj, 2, 2015
4XE5
DownloadVisualize
BU of 4xe5 by Molmil
Crystal structure of the Na,K-ATPase from bovine
分子名称: CHOLESTEROL, MAGNESIUM ION, OUABAIN, ...
著者Gregersen, J.L, Mattle, D, Fedosova, N.U, Nissen, P, Reinhard, L.
登録日2014-12-22
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.901 Å)
主引用文献Isolation, crystallization and crystal structure determination of bovine kidney Na(+),K(+)-ATPase.
Acta Crystallogr.,Sect.F, 72, 2016
3W5A
DownloadVisualize
BU of 3w5a by Molmil
Crystal structure of the calcium pump and sarcolipin from rabbit fast twitch skeletal muscle in the E1.Mg2+ state
分子名称: 2',3'-O-[(1r)-2,4,6-trinitrocyclohexa-2,5-diene-1,1-diyl]adenosine 5'-(dihydrogen phosphate), MAGNESIUM ION, PHOSPHATIDYLETHANOLAMINE, ...
著者Toyoshima, C, Iwasawa, S, Ogawa, H, Hirata, A, Tsueda, J, Inesi, G.
登録日2013-01-27
公開日2013-03-06
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
3W5D
DownloadVisualize
BU of 3w5d by Molmil
Crystal structure of the calcium pump in the E2+Pi state
分子名称: PHOSPHATIDYLETHANOLAMINE, SERCA1a, SODIUM ION, ...
著者Toyoshima, C, Iwasawa, S, Ogawa, H, Hirata, A, Tsueda, J, Inesi, G.
登録日2013-01-27
公開日2013-03-06
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
3NAN
DownloadVisualize
BU of 3nan by Molmil
SR Ca(2+)-ATPase in the HnE2 state complexed with a Thapsigargin derivative Boc-(phi)Tg
分子名称: (3S,3aR,4S,6S,6aR,7S,8S,9R,9aS,9bS)-6-(acetyloxy)-4-{[4-(3-{6-[(tert-butoxycarbonyl)amino]hexyl}-4-hydroxyphenyl)butanoyl]oxy}-3,3a-dihydroxy-3,6,9-trimethyl-8-{[(2Z)-2-methylbut-2-enoyl]oxy}-2-oxododecahydroazuleno[4,5-b]furan-7-yl octanoate, MAGNESIUM ION, PHOSPHATIDYLETHANOLAMINE, ...
著者Winther, A.M.L, Sonntag, Y, Olesen, C, Moller, J.V, Nissen, P.
登録日2010-06-02
公開日2010-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Critical roles of hydrophobicity and orientation of side chains for inactivation of sarcoplasmic reticulum Ca2+-ATPase with thapsigargin and thapsigargin analogs
J.Biol.Chem., 285, 2010
3N8G
DownloadVisualize
BU of 3n8g by Molmil
Structure of the (SR)Ca2+-ATPase Ca2-E1-CaAMPPCP form
分子名称: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
著者Bublitz, M, Olesen, C, Poulsen, H, Morth, J.P, Moller, J.V, Nissen, P.
登録日2010-05-28
公開日2011-06-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.585 Å)
主引用文献Ion pathways in the sarcoplasmic reticulum Ca2+-ATPase.
J.Biol.Chem., 288, 2013
4YCL
DownloadVisualize
BU of 4ycl by Molmil
Crystal structure of the SR CA2+-ATPASE with bound CPA
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, MAGNESIUM ION, POTASSIUM ION, ...
著者Ogawa, H, Takahashi, M, Kondou, Y, Toyoshima, C.
登録日2015-02-20
公開日2015-04-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
4Y3U
DownloadVisualize
BU of 4y3u by Molmil
The structure of phospholamban bound to the calcium pump SERCA1a
分子名称: Cardiac phospholamban, POTASSIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1
著者Hurley, T.D.
登録日2015-02-10
公開日2015-02-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.51 Å)
主引用文献The structural basis for phospholamban inhibition of the calcium pump in sarcoplasmic reticulum.
J. Biol. Chem., 288, 2013
7NXF
DownloadVisualize
BU of 7nxf by Molmil
Structure of the fungal plasma membrane proton pump Pma1 in its auto-inhibited state - monomer unit
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
著者Heit, S, Geurts, M.M.G, Murphy, B.J, Corey, R, Mills, D.J, Kuehlbrandt, W, Bublitz, M.
登録日2021-03-18
公開日2021-11-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the hexameric fungal plasma membrane proton pump in its autoinhibited state.
Sci Adv, 7, 2021

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon