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PDB: 1515 件

5XPK
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BU of 5xpk by Molmil
Crystal structure of ubiquitin-k6mimic
分子名称: D-ubiquitin, Ubiquitin
著者Man, P, Shuai, G, Qian, Q, Lei, L.
登録日2017-06-03
公開日2017-07-19
実験手法X-RAY DIFFRACTION (2.274 Å)
主引用文献Structure of ubiquitin-k6mimic at 2.27 Angstroms resolution.
To Be Published
5XQM
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BU of 5xqm by Molmil
NMR solution structure of SMO1, Sumo homologue in Caenorhabditis elegans
分子名称: Small ubiquitin-related modifier
著者Gowda, C.M, Surana, P, Das, R.
登録日2017-06-07
公開日2017-11-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural and functional analysis of SMO-1, the SUMO homolog in Caenorhabditis elegans
PLoS ONE, 12, 2017
5XK4
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BU of 5xk4 by Molmil
Retracted state of S65-phosphorylated ubiquitin
分子名称: Polyubiquitin-B
著者Dong, X, Gong, Z, Qin, L.Y, Ran, M.L, Zhang, C.L, Liu, K, Liu, Z, Zhang, W.P, Tang, C.
登録日2017-05-05
公開日2017-06-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Ubiquitin S65 phosphorylation engenders a pH-sensitive conformational switch
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XK5
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BU of 5xk5 by Molmil
Relaxed state of S65-phosphorylated ubiquitin
分子名称: Polyubiquitin-B
著者Xu, D, Zhou, G, Qin, L.Y, Ran, M.L, Zhang, C.L, Liu, K, Liu, Z, Zhang, W.P, Tang, C.
登録日2017-05-05
公開日2017-06-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Ubiquitin S65 phosphorylation engenders a pH-sensitive conformational switch
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5YC2
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BU of 5yc2 by Molmil
Crystal structure of inner membrane protein Bqt4 in complex with telomeric protein Rap1
分子名称: DNA-binding protein rap1, Ubiquitin-like protein SMT3,Bouquet formation protein 4
著者Chen, Y, Hu, C.
登録日2017-09-06
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.704 Å)
主引用文献Structural insights into chromosome attachment to the nuclear envelope by an inner nuclear membrane protein Bqt4 in fission yeast.
Nucleic Acids Res., 47, 2019
5YDK
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BU of 5ydk by Molmil
Crystal structure of RNF168 UDM1 in complex with Lys63-linked diubiquitin, tetrameric form
分子名称: E3 ubiquitin-protein ligase RNF168, GLYCEROL, Ubiquitin-40S ribosomal protein S27a
著者Takahashi, T.S, Sato, Y, Fukai, S.
登録日2017-09-13
公開日2018-03-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.505 Å)
主引用文献Structural insights into two distinct binding modules for Lys63-linked polyubiquitin chains in RNF168
Nat Commun, 9, 2018
5YCA
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BU of 5yca by Molmil
Crystal structure of inner membrane protein Bqt4 in complex with LEM2
分子名称: Lap-Emerin-Man domain protein 2, Ubiquitin-like protein SMT3,Bouquet formation protein 4
著者Chen, Y, Hu, C.
登録日2017-09-07
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural insights into chromosome attachment to the nuclear envelope by an inner nuclear membrane protein Bqt4 in fission yeast.
Nucleic Acids Res., 47, 2019
5ZEW
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BU of 5zew by Molmil
A ubiquitin-like protein from the hyperthermophilic archaea Caldiarchaeum subterraneum
分子名称: Ubiquitin-like protein
著者Mi, J, Ye, K.Q.
登録日2018-02-28
公開日2019-02-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The hydrophobic effect and electrostatic interactions contribute to the thermostability of the ubiquitin-like protein from the hyperthermophilic archaea Caldiarchaeum subterraneum
To Be Published
5XIU
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BU of 5xiu by Molmil
Crystal structure of RNF168 UDM2 in complex with Lys63-linked diubiquitin
分子名称: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase RNF168, Ubiquitin-40S ribosomal protein S27a
著者Takahashi, T.S, Sato, Y, Fukai, S.
登録日2017-04-27
公開日2018-03-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into two distinct binding modules for Lys63-linked polyubiquitin chains in RNF168.
Nat Commun, 9, 2018
5ZD0
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BU of 5zd0 by Molmil
Solution structure of human ubiquitin with three alanine mutations in living eukaryotic cells by in-cell NMR spectroscopy
分子名称: ubiquitin
著者Tanaka, T, Ikeya, T, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y.
登録日2018-02-22
公開日2019-08-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells.
Angew.Chem.Int.Ed.Engl., 58, 2019
8T48
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BU of 8t48 by Molmil
The N4BP1 CUE-like domain in complex with linear di-Ubiquitin
分子名称: Di-Ubiquitin, GLYCEROL, LITHIUM ION, ...
著者Schubert, A.F, Harris, S.F.
登録日2023-06-08
公開日2024-03-13
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献N4BP1 coordinates ubiquitin-dependent crosstalk within the I kappa B kinase family to limit Toll-like receptor signaling and inflammation.
Immunity, 57, 2024
6JL3
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BU of 6jl3 by Molmil
Crystal Structure of the UBL domain of Plasmodium Falciparum Dsk2
分子名称: Ubiquitin domain-containing protein DSK2,putative
著者Gupta, I, Khan, S.
登録日2019-03-03
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.303 Å)
主引用文献The recognition of proteasomal receptors by Plasmodium falciparum DSK2.
Mol.Biochem.Parasitol., 236, 2020
6K2U
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BU of 6k2u by Molmil
Crystal structure of Thr66 ADP-ribosylated ubiquitin
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, MAGNESIUM ION, Polyubiquitin-C, ...
著者Wang, X, Zhou, Y, Zhu, Y.
登録日2019-05-15
公開日2020-03-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.554 Å)
主引用文献Threonine ADP-Ribosylation of Ubiquitin by a Bacterial Effector Family Blocks Host Ubiquitination.
Mol.Cell, 78, 2020
6GF2
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BU of 6gf2 by Molmil
The structure of the ubiquitin-like modifier FAT10 reveals a novel targeting mechanism for degradation by the 26S proteasome
分子名称: Ubiquitin D
著者Aichem, A, Anders, S, Catone, N, Roessler, P, Stotz, S, Berg, A, Schwab, R, Scheuermann, S, Bialas, J, Schmidtke, G, Peter, C, Groettrup, M, Wiesner, S.
登録日2018-04-29
公開日2018-08-08
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The structure of the ubiquitin-like modifier FAT10 reveals an alternative targeting mechanism for proteasomal degradation.
Nat Commun, 9, 2018
6K4I
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BU of 6k4i by Molmil
The partially disordered conformation of ubiquitin (Q41N variant)
分子名称: ubiquitin
著者Wakamoto, T, Ikeya, T, Kitazawa, S, Baxter, N.J, Williamson, M.P, Kitahara, R.
登録日2019-05-24
公開日2019-10-30
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Paramagnetic relaxation enhancement-assisted structural characterization of a partially disordered conformation of ubiquitin.
Protein Sci., 28, 2019
6KNA
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BU of 6kna by Molmil
Viral Ubiquitin from Autographa californica Nucleo Polyhedrosis Virus
分子名称: Viral ubiquitin
著者Negi, H, Reddy, P.P, Das, R.
登録日2019-08-05
公開日2020-06-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A novel polyubiquitin chain linkage formed by viral Ubiquitin is resistant to host deubiquitinating enzymes.
Biochem.J., 477, 2020
6KOX
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BU of 6kox by Molmil
Relaxed state of S65/T66 double-phosphorylated ubiquitin
分子名称: Polyubiquitin-B
著者Dong, X, Tang, C.
登録日2019-08-13
公開日2019-08-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Ubiquitin is double-phosphorylated by PINK1 for enhanced pH-sensitivity of conformational switch.
Protein Cell, 10, 2019
8XEP
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BU of 8xep by Molmil
Crystal structure of a Legionella pneumophila type IV effector in complex with ubiquitin
分子名称: SULFATE ION, Type IV effector MavL, Ubiquitin
著者Tan, J.X, Wang, X.F, Zhou, Y, Zhu, Y.Q.
登録日2023-12-12
公開日2024-05-01
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Legionella effector LnaB is a phosphoryl AMPylase that impairs phosphosignalling.
Nature, 631, 2024
2KX3
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BU of 2kx3 by Molmil
The solution structure of the mutant of UBL domain of UBLCP1, I5M
分子名称: Ubiquitin-like domain-containing CTD phosphatase 1
著者Lee, N, Ko, S.
登録日2010-04-23
公開日2011-04-27
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The solution structure of the mutant of UBL domain of UBLCP1, I5M
To be Published
2KD0
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BU of 2kd0 by Molmil
NMR solution structure of O64736 protein from Arabidopsis thaliana. Northeast Structural Genomics Consortium MEGA Target AR3445A
分子名称: LRR repeats and ubiquitin-like domain-containing protein At2g30105
著者Swapna, G.V.T, Shastry, R, Foote, E, Ciccosanti, C, Jiang, M, Xiao, R, Nair, R, Everett, J, Huang, Y, Acton, T.B, Rost, B, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2008-12-31
公開日2009-02-10
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献NMR solution structure of O64736 protein from Arabidopsis thaliana
To be Published
2LRW
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BU of 2lrw by Molmil
Solution structure of a ubiquitin-like protein from Trypanosoma brucei
分子名称: Ubiquitin, putative
著者Wang, R, Wang, T, Liao, S, Zhang, J, Tu, X.
登録日2012-04-13
公開日2013-04-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a ubiqutin-like protein from Trypanosoma bucei
To be Published
2LJ5
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BU of 2lj5 by Molmil
Description of the Structural fluctuations of proteins from structure-based calculations of Residual dipolar couplings
分子名称: Ubiquitin
著者De Simone, A, Montalvao, R, Vendruscolo, M.
登録日2011-09-06
公開日2012-07-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Determination of structural fluctuations of proteins from structure-based calculations of residual dipolar couplings.
J.Biomol.Nmr, 53, 2012
2M8S
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BU of 2m8s by Molmil
NMR Structure of the Cytoplasmic Tail of the Membrane Form of Heparin-binding EGF-like Growth Factor (proHB-EGF-CT) Complexed with the Ubiquitin Homology Domain of Bcl-2-associated Athanogene 1 from Mus musculus (mBAG-1-UBH)
分子名称: BAG family molecular chaperone regulator 1, Proheparin-binding EGF-like growth factor
著者Huang, H.W, Yu, C.
登録日2013-06-03
公開日2014-04-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Nuclear Magnetic Resonance Structure of the Cytoplasmic Tail of Heparin Binding EGF-like Growth Factor (proHB-EGF-CT) Complexed with the Ubiquitin Homology Domain of Bcl-2-Associated Athanogene 1 from Mus musculus (mBAG-1-UBH).
Biochemistry, 53, 2014
2LWP
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BU of 2lwp by Molmil
The NMR solution structure of the the ubiquitin homology domain of mouse BAG-1
分子名称: BAG family molecular chaperone regulator 1
著者Huang, H, Yu, C.
登録日2012-08-05
公開日2013-06-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR solution structure of the ubiquitin homology domain of Bcl-2-associated athanogene 1 (BAG-1-UBH) from Mus musculus.
Biochem.Biophys.Res.Commun., 431, 2013
2MBE
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BU of 2mbe by Molmil
Backbone 1H and 15N Chemical Shift Assignments for the first domain of FAT10
分子名称: Ubiquitin D
著者Wang, W, Lim, L, Qin, H.
登録日2013-07-30
公開日2014-08-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Disruption of FAT10-MAD2 binding inhibits tumor progression.
Proc.Natl.Acad.Sci.USA, 111, 2014

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件を2024-07-31に公開中

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