Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 543 件
2G2S
DownloadVisualize
BU of 2g2s by Molmil
Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P.
登録日2006-02-16
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
2HFC
DownloadVisualize
BU of 2hfc by Molmil
Structure of S65T Y66F R96A GFP variant in precursor state
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2006-06-23
公開日2007-03-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
2HQZ
DownloadVisualize
BU of 2hqz by Molmil
Crystal structure of L42H design intermediate for GFP metal ion reporter
分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
登録日2006-07-19
公開日2008-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
4L1I
DownloadVisualize
BU of 4l1i by Molmil
Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Ca
分子名称: CALCIUM ION, EGFP-based Calcium Sensor CatchER
著者Zhang, Y, Weber, I.T.
登録日2013-06-03
公開日2013-12-11
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013
2DUH
DownloadVisualize
BU of 2duh by Molmil
crystal structure of a green fluorescent protein variant S65T/H148N at pH 9.5
分子名称: Green fluorescent protein
著者Shu, X, Remington, S.J.
登録日2006-07-23
公開日2007-07-10
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies.
Biochemistry, 46, 2007
2QZ0
DownloadVisualize
BU of 2qz0 by Molmil
Mature Q183E variant of Green Fluorescent Protein Chromophore
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
登録日2007-08-15
公開日2009-04-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the GFP Fluorophore Biosynthesis Pathway
To be Published
3DQ7
DownloadVisualize
BU of 3dq7 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 1: Structure 17 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4AR7
DownloadVisualize
BU of 4ar7 by Molmil
X-ray structure of the cyan fluorescent protein mTurquoise
分子名称: GREEN FLUORESCENT PROTEIN
著者von Stetten, D, Noirclerc-Savoye, M, Goedhart, J, Gadella, T.W.J, Royant, A.
登録日2012-04-21
公開日2012-08-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Structure of a Fluorescent Protein from Aequorea Victoria Bearing the Obligate-Monomer Mutation A206K.
Acta Crystallogr.,Sect.F, 68, 2012
4GES
DownloadVisualize
BU of 4ges by Molmil
crystal structure of GFP-TYR151PYZ with an unnatural amino acid incorporation
分子名称: Green fluorescent protein
著者Dong, J, Liu, X, Li, J, Wang, J, Gong, W.
登録日2012-08-02
公開日2012-08-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Genetic incorporation of a metal-chelating amino Acid as a probe for protein electron transfer.
Angew.Chem.Int.Ed.Engl., 51, 2012
2DUE
DownloadVisualize
BU of 2due by Molmil
crystal structure of a green fluorescent protein variant S65T/H148D at pH 10
分子名称: Green fluorescent protein
著者Shu, X, Remington, S.J.
登録日2006-07-23
公開日2007-07-10
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies.
Biochemistry, 46, 2007
2FZU
DownloadVisualize
BU of 2fzu by Molmil
Reduced enolate chromophore intermediate for GFP variant
分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
登録日2006-02-10
公開日2006-03-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
6OFL
DownloadVisualize
BU of 6ofl by Molmil
Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-ClY); ih circular permutant (50-51)
分子名称: Green fluorescent protein (GFP); S65T, Y66(3-ClY); ih circular permutant (50-51)
著者Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
登録日2019-03-31
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
4XOW
DownloadVisualize
BU of 4xow by Molmil
Structure of rsGreen0.7 in the green-on-state
分子名称: rsGreen0.7
著者De Zitter, E, Van Meervelt, L.
登録日2015-01-16
公開日2015-09-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Expression-Enhanced Fluorescent Proteins Based on Enhanced Green Fluorescent Protein for Super-resolution Microscopy.
Acs Nano, 9, 2015
5DQB
DownloadVisualize
BU of 5dqb by Molmil
Green/cyan WasCFP at pH 8.0
分子名称: GLYCEROL, SODIUM ION, WasCFP_pH2
著者Pletnev, V, Pletneva, N, Pletnev, S.
登録日2015-09-14
公開日2016-07-27
最終更新日2019-02-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore
Russ.J.Bioorganic Chem., 42 (6), 2016
2HJO
DownloadVisualize
BU of 2hjo by Molmil
Crystal structure of V224H design intermediate for GFP metal ion reporter
分子名称: 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION
著者Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
登録日2006-06-30
公開日2008-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
4J8A
DownloadVisualize
BU of 4j8a by Molmil
Irradiated-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 145
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
著者Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
登録日2013-02-14
公開日2013-05-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
6IR7
DownloadVisualize
BU of 6ir7 by Molmil
Green fluorescent protein variant GFPuv with the modification to 6-hydroxynorleucine at the C-terminus
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-HYDROXY-L-NORLEUCINE, Green fluorescent protein, ...
著者Nakatani, T, Yasui, N, Yamashita, A.
登録日2018-11-12
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.277 Å)
主引用文献Specific modification at the C-terminal lysine residue of the green fluorescent protein variant, GFPuv, expressed in Escherichia coli.
Sci Rep, 9, 2019
3SSH
DownloadVisualize
BU of 3ssh by Molmil
Engineered high-affinity halide-binding protein derived from YFP: chloride complex
分子名称: CHLORIDE ION, Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-08
公開日2012-07-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.277 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
5NI3
DownloadVisualize
BU of 5ni3 by Molmil
sfGFP 204-204 mutant dimer
分子名称: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
著者Worthy, H.L, Rizkallah, P.J.
登録日2017-03-23
公開日2018-09-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Association of Fluorescent Protein Pairs and Its Significant Impact on Fluorescence and Energy Transfer
Adv Sci, 2020
5OX8
DownloadVisualize
BU of 5ox8 by Molmil
Structure of Enhanced Cyan Fluorescent Protein at pH 5.0
分子名称: CHLORIDE ION, Green fluorescent protein
著者Gotthard, G, von Stetten, D, Clavel, D, Noirclerc-Savoye, M, Royant, A.
登録日2017-09-06
公開日2017-11-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Chromophore Isomer Stabilization Is Critical to the Efficient Fluorescence of Cyan Fluorescent Proteins.
Biochemistry, 56, 2017
6HUT
DownloadVisualize
BU of 6hut by Molmil
GFP8 - a stabilized variant of cycle-3 GFP
分子名称: Green fluorescent protein
著者Petek, M, Rangel Pereira, M.
登録日2018-10-09
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献GFP8 - a stabilized variant of cycle-3 GFP
To Be Published
3LA1
DownloadVisualize
BU of 3la1 by Molmil
High resolution crystal structure of CyPet mutant A167I
分子名称: Green fluorescent protein, SODIUM ION
著者Hu, X.
登録日2010-01-06
公開日2011-01-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Crystal Structure of CyPet
To be Published
7A7L
DownloadVisualize
BU of 7a7l by Molmil
rsEGFP in the green-off state
分子名称: Green fluorescent protein, TETRAETHYLENE GLYCOL
著者De Zitter, E, Dedecker, P, Van Meervelt, L.
登録日2020-08-30
公開日2021-02-17
最終更新日2021-05-05
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
3W1C
DownloadVisualize
BU of 3w1c by Molmil
Structure of a pressure sensitive YFP variant YFP-G1
分子名称: Green Fluorescent protein
著者Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
登録日2012-11-14
公開日2013-10-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013
2G6E
DownloadVisualize
BU of 2g6e by Molmil
Structure of cyclized F64L S65A Y66S GFP variant
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P.
登録日2006-02-24
公開日2006-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006

222036

件を2024-07-03に公開中

PDB statisticsPDBj update infoContact PDBjnumon