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PDB: 221 件

6PX1
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BU of 6px1 by Molmil
Set2 bound to nucleosome
分子名称: DNA (149-MER), Histone H2B 1.1, Histone H3, ...
著者Halic, M, Bilokapic, S.
登録日2019-07-24
公開日2019-08-28
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Nucleosome and ubiquitin position Set2 to methylate H3K36.
Nat Commun, 10, 2019
4LD9
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BU of 4ld9 by Molmil
Crystal structure of the N-terminally acetylated BAH domain of Sir3 bound to the nucleosome core particle
分子名称: Histone H2A, Histone H2B 1.1, Histone H3.2, ...
著者Arnaudo, N, Fernandez, I.S, McLaughlin, S.H, Peak-Chew, S.Y, Rhodes, D, Martino, F.
登録日2013-06-24
公開日2013-08-14
最終更新日2013-09-18
実験手法X-RAY DIFFRACTION (3.306 Å)
主引用文献The N-terminal acetylation of Sir3 stabilizes its binding to the nucleosome core particle.
Nat.Struct.Mol.Biol., 20, 2013
8PEP
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BU of 8pep by Molmil
H3K36me2 nucleosome-LEDGF/p75 PWWP domain complex - pose 2
分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ...
著者Koutna, E, Kouba, T, Veverka, V.
登録日2023-06-14
公開日2023-08-16
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Multivalency of nucleosome recognition by LEDGF.
Nucleic Acids Res., 51, 2023
8CBN
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BU of 8cbn by Molmil
structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome
分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ...
著者Koutna, E, Kouba, T, Novacek, J, Veverka, V.
登録日2023-01-25
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Multivalency of nucleosome recognition by LEDGF.
Nucleic Acids Res., 51, 2023
8T9H
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BU of 8t9h by Molmil
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
分子名称: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
著者Abini-Agbomson, S, Armache, K.-J.
登録日2023-06-24
公開日2023-09-13
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1.
Biorxiv, 2023
6VEN
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BU of 6ven by Molmil
Yeast COMPASS in complex with a ubiquitinated nucleosome
分子名称: 601 DNA (146-MER), COMPASS component BRE2, COMPASS component SDC1, ...
著者Worden, E.J, Wolberger, C.
登録日2020-01-02
公開日2020-01-15
最終更新日2020-01-22
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structural basis for COMPASS recognition of an H2B-ubiquitinated nucleosome.
Elife, 9, 2020
7VDV
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BU of 7vdv by Molmil
The overall structure of human chromatin remodeling PBAF-nucleosome complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, AT-rich interactive domain-containing protein 2,AT-rich interactive domain-containing protein 2, Actin, ...
著者Chen, Z.C, Chen, K.J, Yuan, J.J.
登録日2021-09-07
公開日2022-05-18
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of human chromatin-remodelling PBAF complex bound to a nucleosome.
Nature, 605, 2022
6IRO
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BU of 6iro by Molmil
the crosslinked complex of ISWI-nucleosome in the ADP-bound state
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (167-MER), Histone H2A, ...
著者Yan, L.J, Wu, H, Li, X.M, Gao, N, Chen, Z.C.
登録日2018-11-13
公開日2019-04-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of the ISWI-nucleosome complex reveal a conserved mechanism of chromatin remodeling.
Nat. Struct. Mol. Biol., 26, 2019
7OHB
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BU of 7ohb by Molmil
TBP-nucleosome complex
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Wang, H, Cramer, P.
登録日2021-05-10
公開日2021-07-28
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7VVU
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BU of 7vvu by Molmil
NuA4 HAT module bound to the nucleosome
分子名称: CARBOXYMETHYL COENZYME *A, Chromatin modification-related protein EAF6, Chromatin modification-related protein YNG2, ...
著者Chen, Z, Qu, K.
登録日2021-11-09
公開日2022-08-10
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the NuA4 acetyltransferase complex bound to the nucleosome.
Nature, 610, 2022
8HXZ
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BU of 8hxz by Molmil
Cryo-EM structure of Eaf3 CHD in complex with nucleosome
分子名称: Chromatin modification-related protein EAF3, DNA (352-MER), Histone H2A, ...
著者Cui, H, Wang, H.
登録日2023-01-05
公開日2023-09-27
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of histone deacetylase complex Rpd3S bound to nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
8G6Q
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BU of 8g6q by Molmil
H2AK119ub-modified nucleosome ubiquitin position 1
分子名称: 601 DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2023-02-15
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Ubiquitinated H2B as gatekeeper of the nucleosome acidic patch
To Be Published
3B6F
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BU of 3b6f by Molmil
Nucleosome core particle treated with cisplatin
分子名称: 147-MER DNA, Histone H2A, Histone H2B 1.1, ...
著者Wu, B, Davey, C.A.
登録日2007-10-29
公開日2007-12-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Site selectivity of platinum anticancer therapeutics
Nat.Chem.Biol., 4, 2008
3B6G
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BU of 3b6g by Molmil
Nucleosome core particle treated with oxaliplatin
分子名称: 147-MER DNA, Histone H2A, Histone H2B 1.1, ...
著者Wu, B, Davey, C.A.
登録日2007-10-29
公開日2007-12-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Site selectivity of platinum anticancer therapeutics
Nat.Chem.Biol., 4, 2008
8G6S
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BU of 8g6s by Molmil
H2AK119ub-modified nucleosome ubiquitin position 2
分子名称: 601 DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Hicks, C.W, Wolberger, C.
登録日2023-02-15
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Ubiquitinated H2B as gatekeeper of the nucleosome acidic patch
To Be Published
8T3Y
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BU of 8t3y by Molmil
Structure of Bre1-nucleosome complex - state1
分子名称: 601 DNA Strand 1, 601 DNA Strand 2, E3 ubiquitin-protein ligase BRE1, ...
著者Zhao, F, Hicks, C.W, Wolberger, C.
登録日2023-06-08
公開日2023-10-18
最終更新日2023-11-22
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Mechanism of histone H2B monoubiquitination by Bre1.
Nat.Struct.Mol.Biol., 30, 2023
6IY2
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BU of 6iy2 by Molmil
Structure of Snf2-MMTV-A nucleosome complex at shl2 in ADP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (147-MER), DNA (167-MER), ...
著者Li, M, Xia, X, Liu, X, Li, X, Chen, Z.
登録日2018-12-12
公開日2019-04-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Mechanism of DNA translocation underlying chromatin remodelling by Snf2.
Nature, 567, 2019
7CRR
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BU of 7crr by Molmil
Native NSD3 bound to 187-bp nucleosome
分子名称: DNA (168-MER), DNA(168-MER), Histone H2A, ...
著者Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
登録日2020-08-14
公開日2020-10-21
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
8EUE
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BU of 8eue by Molmil
Class1 of the INO80-Nucleosome complex
分子名称: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Wu, H, Munoz, E, Gourdet, M, Narlikar, G, Cheng, Y.F.
登録日2022-10-18
公開日2023-07-12
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Reorientation of INO80 on hexasomes reveals basis for mechanistic versatility.
Science, 381, 2023
6O96
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BU of 6o96 by Molmil
Dot1L bound to the H2BK120 Ubiquitinated nucleosome
分子名称: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
著者Valencia-Sanchez, M.I, De Ioannes, P.E, Miao, W, Vasilyev, N, Chen, R, Nudler, E, Armache, J.-P, Armache, K.-J.
登録日2019-03-13
公開日2019-04-24
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural Basis of Dot1L Stimulation by Histone H2B Lysine 120 Ubiquitination.
Mol.Cell, 74, 2019
6WKR
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BU of 6wkr by Molmil
PRC2-AEBP2-JARID2 bound to H2AK119ub1 nucleosome
分子名称: DNA (314-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Kasinath, V, Nogales, E, Beck, C, Sauer, P, Poepsel, S, Kosmatka, J, Faini, M, Toso, D, Aebersold, R.
登録日2020-04-16
公開日2021-02-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献JARID2 and AEBP2 regulate PRC2 in the presence of H2AK119ub1 and other histone modifications.
Science, 371, 2021
3KWQ
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BU of 3kwq by Molmil
Structural characterization of H3K56Q nucleosomes and nucleosomal arrays
分子名称: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
著者Lilyestrom, W.G, Clark, N.
登録日2009-12-01
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural characterization of H3K56Q nucleosomes and nucleosomal arrays.
Biochim.Biophys.Acta, 1799
6NQA
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BU of 6nqa by Molmil
Active state Dot1L bound to the H2B-Ubiquitinated nucleosome, 1-to-1 complex
分子名称: 601 DNA Strand 1, 601 DNA Strand 2, Histone H2A type 1, ...
著者Worden, E.J, Hoffmann, N.A, Wolberger, C.
登録日2019-01-19
公開日2019-02-20
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Mechanism of Cross-talk between H2B Ubiquitination and H3 Methylation by Dot1L.
Cell, 176, 2019
8DU4
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BU of 8du4 by Molmil
Complex between RbBP5-WDR5 and an H2B-ubiquitinated nucleosome
分子名称: 601 DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
著者Niklas, H.A, Rahman, S, Worden, E.J, Wolberger, C.
登録日2022-07-26
公開日2022-09-21
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Multistate structures of the MLL1-WRAD complex bound to H2B-ubiquitinated nucleosome.
Proc.Natl.Acad.Sci.USA, 119, 2022
8IHM
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BU of 8ihm by Molmil
Eaf3 CHD domain bound to the nucleosome
分子名称: Chromatin modification-related protein EAF3, DNA (164-MER), DNA (165-MER), ...
著者Zhang, Y, Gang, C.
登録日2023-02-23
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structural basis for nucleosome binding and catalysis by the yeast Rpd3S/HDAC holoenzyme.
Cell Res., 33, 2023

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件を2024-07-03に公開中

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