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6WI5
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BU of 6wi5 by Molmil
De novo designed protein Foldit4
Descriptor: De novo designed protein Foldit4
Authors:Bera, A.K, Koepnick, B, Boykov, A, Baker, D.
Deposit date:2020-04-08
Release date:2020-04-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:De novo design of protein logic gates.
Science, 368, 2020
6MSP
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BU of 6msp by Molmil
De novo Designed Protein Foldit3
Descriptor: De novo Designed Protein Foldit3
Authors:Liu, G, Ishida, Y, Swapna, G.V.T, Kleinfelter, S, Koepnick, B, Baker, D, Montelione, G.T.
Deposit date:2018-10-17
Release date:2019-06-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:De novo protein design by citizen scientists.
Nature, 570, 2019
7M5T
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BU of 7m5t by Molmil
Solution NMR structure of de novo designed protein 0515
Descriptor: De novo designed protein 0515
Authors:Ramelot, T.A, Hao, J, Baker, D, Montelione, G.T.
Deposit date:2021-03-24
Release date:2021-12-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:De novo protein design by deep network hallucination.
Nature, 600, 2021
5WLJ
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BU of 5wlj by Molmil
De Novo Design of Polynuclear Transition Metal Clusters in Helix Bundles-4EH1
Descriptor: De Novo Metal Binding Helical Bundle, ZINC ION
Authors:Zhang, S.-Q, Liu, L, DeGrado, W.F.
Deposit date:2017-07-27
Release date:2018-01-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:De Novo Design of Tetranuclear Transition Metal Clusters Stabilized by Hydrogen-Bonded Networks in Helical Bundles.
J. Am. Chem. Soc., 140, 2018
5KPH
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BU of 5kph by Molmil
Solution NMR Structure of Denovo Beta Sheet Design Protein, Northeast Structural Genomics Consortium (NESG) Target OR485
Descriptor: De novo Beta Sheet Design Protein OR485
Authors:Tang, Y, Liu, G, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2016-07-04
Release date:2016-09-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Principles for designing proteins with cavities formed by curved beta sheets.
Science, 355, 2017
5KPE
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BU of 5kpe by Molmil
Solution NMR Structure of Denovo Beta Sheet Design Protein, Northeast Structural Genomics Consortium (NESG) Target OR664
Descriptor: De novo Beta Sheet Design Protein OR664
Authors:Tang, Y, Liu, G, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2016-07-03
Release date:2016-09-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Principles for designing proteins with cavities formed by curved beta sheets.
Science, 355, 2017
2MQ8
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BU of 2mq8 by Molmil
Solution NMR Structure of De novo designed protein LFR1 1 with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR414
Descriptor: De novo designed protein LFR1
Authors:Liu, G, Lin, Y, Koga, N, Koga, R, Xiao, R, Janjua, H, Pederson, K, Acton, T.B, Kornhaber, G, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2014-06-12
Release date:2014-08-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Control over overall shape and size in de novo designed proteins.
Proc.Natl.Acad.Sci.USA, 112, 2015
8HDU
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BU of 8hdu by Molmil
De novo design cavitated protein without predefined topology
Descriptor: De novo design cavitated protein
Authors:Hu, X, Xu, Y.
Deposit date:2022-11-06
Release date:2023-01-18
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:De novo design of cavity-containing proteins with a backbone-centered neural network energy function.
Structure, 32, 2024
8HDV
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BU of 8hdv by Molmil
De novo design cavitated protein without predefined topology
Descriptor: De novo design cavitated protein
Authors:Hu, X, Xu, Y.
Deposit date:2022-11-06
Release date:2023-01-18
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:De novo design of cavity-containing proteins with a backbone-centered neural network energy function.
Structure, 32, 2024
5YXI
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BU of 5yxi by Molmil
Designed protein dRafX6
Descriptor: Designed protein dRafX6
Authors:Liu, R.
Deposit date:2017-12-05
Release date:2018-12-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:De novo sequence redesign of a functional Ras-binding domain globally inverted the surface charge distribution and led to extreme thermostability.
Biotechnol.Bioeng., 118, 2021
8TN6
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BU of 8tn6 by Molmil
De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo rucaparib
Descriptor: De novo designed protein, Rucaparib
Authors:Lu, L, DeGrado, W.F.
Deposit date:2023-08-01
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:De novo design of drug-binding proteins with predictable binding energy and specificity.
Science, 384, 2024
8TN1
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BU of 8tn1 by Molmil
De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - apo
Descriptor: De novo designed 4 helix bundles, SULFATE ION
Authors:Lu, L, DeGrado, W.F.
Deposit date:2023-08-01
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:De novo design of drug-binding proteins with predictable binding energy and specificity.
Science, 384, 2024
8JPA
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BU of 8jpa by Molmil
De novo design cavitated protein without predefined topology
Descriptor: De novo design cavitated protein
Authors:Hu, X, Xu, Y.
Deposit date:2023-06-11
Release date:2023-06-28
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:De novo design of cavity-containing proteins with a backbone-centered neural network energy function.
Structure, 32, 2024
7SKN
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BU of 7skn by Molmil
De novo synthetic protein DIG8-CC (tetragonal space group)
Descriptor: De novo synthetic protein DIG8-CC
Authors:Mendes, S.R, Eckhard, U, Marcos, E, Gomis-Ruth, F.X.
Deposit date:2021-10-21
Release date:2022-10-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:De novo design of immunoglobulin-like domains
Nat Commun, 13, 2022
7SKO
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BU of 7sko by Molmil
De novo synthetic protein DIG8-CC (orthogonal space group)
Descriptor: De novo synthetic protein DIG8-CC, MAGNESIUM ION
Authors:Mendes, S.R, Eckhard, U, Marcos, E, Gomis-Ruth, F.X.
Deposit date:2021-10-21
Release date:2022-10-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:De novo design of immunoglobulin-like domains
Nat Commun, 13, 2022
7SKP
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BU of 7skp by Molmil
De novo synthetic protein DIG14 (tetragonal space group)
Descriptor: De novo synthetic protein DIG14
Authors:Mendes, S.R, Eckhard, U, Marcos, E, Gomis-Ruth, F.X.
Deposit date:2021-10-21
Release date:2022-10-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:De novo design of immunoglobulin-like domains
Nat Commun, 13, 2022
8K7O
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BU of 8k7o by Molmil
De novo design protein -T03
Descriptor: De novo design protein
Authors:Wang, S, Liu, Y.
Deposit date:2023-07-27
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:De novo design protein -T03
To Be Published
8K7M
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BU of 8k7m by Molmil
De novo design protein -T01
Descriptor: De novo design protein
Authors:Wang, S, Liu, Y.
Deposit date:2023-07-26
Release date:2024-07-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:De novo design protein -T01
To Be Published
8K7Z
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BU of 8k7z by Molmil
De novo design protein -N1
Descriptor: De novo design protein
Authors:Wang, S, Liu, Y.
Deposit date:2023-07-27
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:De novo design protein -N1
To Be Published
8K8G
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BU of 8k8g by Molmil
De novo design protein -N9
Descriptor: De novo design protein
Authors:Wang, S, Liu, Y.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:De novo design protein -N9
To Be Published
8K8F
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BU of 8k8f by Molmil
De novo design protein -N7
Descriptor: De novo design protein N7, GLYCEROL
Authors:Wang, S, Liu, Y.
Deposit date:2023-07-29
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:De novo design protein -N7
To Be Published
8KAC
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BU of 8kac by Molmil
De novo design protein -NX1
Descriptor: De novo design protein -NX1
Authors:Wang, S, Liu, Y.
Deposit date:2023-08-02
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:De novo design protein -NX1
To Be Published
8KC0
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BU of 8kc0 by Molmil
De novo design protein -NB8
Descriptor: De novo design protein -NB8
Authors:Wang, S, Liu, Y.
Deposit date:2023-08-05
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:De novo design protein -NB8
To Be Published
8K8I
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BU of 8k8i by Molmil
De novo design protein -N14
Descriptor: De novo design protein -N14
Authors:Wang, S, Liu, Y.
Deposit date:2023-07-30
Release date:2024-07-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:De novo design protein -N14
To Be Published
8KC4
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BU of 8kc4 by Molmil
De novo design protein -NA05
Descriptor: De novo design protein -NA05
Authors:Wang, S, Liu, Y.
Deposit date:2023-08-06
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:De novo design protein -NA05
To Be Published

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PDB entries from 2024-08-14

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