Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EYJ
DownloadVisualize
BU of 5eyj by Molmil
Crystal structure of murine neuroglobin mutant V101F at 240 MPa pressure
Descriptor: Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Colloc'h, N, Girard, E, Vallone, B, Prange, T.
Deposit date:2015-11-25
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Determinants of neuroglobin plasticity highlighted by joint coarse-grained simulations and high pressure crystallography.
Sci Rep, 7, 2017
4QMS
DownloadVisualize
BU of 4qms by Molmil
MST3 in complex with DASATINIB
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE, ...
Authors:Olesen, S.H, Watts, C, Zhu, J.-Y, Schonbrunn, E.
Deposit date:2014-06-16
Release date:2015-07-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.883 Å)
Cite:Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3).
Chemmedchem, 11, 2016
8Q1Z
DownloadVisualize
BU of 8q1z by Molmil
Crystal Structure of Human Vaccinia-related kinase 2 (VRK-2) bound to JA-296
Descriptor: 2-[4-[[4-[(3-~{tert}-butyl-1~{H}-pyrazol-5-yl)amino]pyrimidin-2-yl]amino]phenyl]ethanenitrile, Serine/threonine-protein kinase VRK2
Authors:Wang, G.Q, Amrhein, J.A, Knapp, S.
Deposit date:2023-08-01
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of Human Vaccinia-related kinase 2 (VRK-2) bound to JA-296
To Be Published
5EZ5
DownloadVisualize
BU of 5ez5 by Molmil
Crystal structure of active Rab11A (S20V) in complex with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-11A
Authors:Shin, Y.-C, Yoon, J.H, Park, H.H.
Deposit date:2015-11-26
Release date:2016-12-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of active Rab11A (S20V) in complex with GTP
To Be Published
8PYP
DownloadVisualize
BU of 8pyp by Molmil
25 micrometer HEWL crystals solved at room-temperature using fixed-target serial crystallography.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Mason, T.J, Carrillo, M, Beale, J.H, Padeste, C.
Deposit date:2023-07-25
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Micro-structured polymer fixed targets for serial crystallography at synchrotrons and XFELs.
Iucrj, 10, 2023
8PVP
DownloadVisualize
BU of 8pvp by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric compound FGJG18
Descriptor: Casein kinase II subunit alpha, SULFATE ION, ~{N}-[5-[(3-chloranyl-4-phenyl-phenyl)methylamino]pentyl]isoquinoline-5-sulfonamide
Authors:Kraemer, A, Greco, F, Gerninghaus, J, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2023-07-18
Release date:2023-09-20
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Synthesis and evaluation of chemical linchpins for highly selective CK2 alpha targeting.
Eur.J.Med.Chem., 276, 2024
7ZOS
DownloadVisualize
BU of 7zos by Molmil
Class 1 Phytoglobin from Sugar beet (BvPgb1.2)
Descriptor: CYANIDE ION, HEXACYANOFERRATE(3-), Non-symbiotic hemoglobin class 1, ...
Authors:Nyblom, M, Christensen, S, Eriksson, N, Bulow, L.
Deposit date:2022-04-26
Release date:2022-09-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Oxidative Implications of Substituting a Conserved Cysteine Residue in Sugar Beet Phytoglobin BvPgb 1.2.
Antioxidants, 11, 2022
4QO9
DownloadVisualize
BU of 4qo9 by Molmil
MST3 IN COMPLEX WITH Danusertib
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Olesen, S.H, Watts, C, Zhu, J.-Y, Schonbrunn, E.
Deposit date:2014-06-19
Release date:2015-07-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3).
Chemmedchem, 11, 2016
5F00
DownloadVisualize
BU of 5f00 by Molmil
CRYSTAL STRUCTURE OF BACE-1 IN COMPLEX WITH 5-[3-[(3-chloro-8-quinolyl)amino]phenyl]-5-methyl-2,6-dihydro-1,4-oxazin-3-amine
Descriptor: (5~{R})-5-[3-[(3-chloranylquinolin-8-yl)amino]phenyl]-5-methyl-2,6-dihydro-1,4-oxazin-3-amine, Beta-secretase 1, DIMETHYL SULFOXIDE, ...
Authors:Banner, D, Benz, J, Stihle, M, Kuglstatter, A.
Deposit date:2015-11-27
Release date:2016-02-24
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A Real-World Perspective on Molecular Design.
J.Med.Chem., 59, 2016
6YZH
DownloadVisualize
BU of 6yzh by Molmil
Crystal structure of P8C9 bound to CK2alpha
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Casein kinase II subunit alpha, GLYCEROL, ...
Authors:Atkinson, E, Iegre, J, Brear, P, Baker, D, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2020-05-07
Release date:2021-05-19
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Development of small cyclic peptides targeting the CK2 alpha / beta interface.
Chem.Commun.(Camb.), 58, 2022
6TS7
DownloadVisualize
BU of 6ts7 by Molmil
Coagulation factor XI protease domain in complex with active site inhibitor
Descriptor: 2-[2-[[3-(1,2,3,4-tetrahydroisoquinolin-7-yl)phenyl]methoxy]phenyl]ethanoic acid, Coagulation factor XI
Authors:Renatus, M, Schiering, N.
Deposit date:2019-12-20
Release date:2020-07-08
Last modified:2020-08-26
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structure-Based Design and Preclinical Characterization of Selective and Orally Bioavailable Factor XIa Inhibitors: Demonstrating the Power of an Integrated S1 Protease Family Approach.
J.Med.Chem., 63, 2020
4QP7
DownloadVisualize
BU of 4qp7 by Molmil
Crystal Structure of ERK2 in complex with 2-(1H-pyrazol-4-yl)-5H-pyrrolo[2,3-b]pyrazine
Descriptor: 2-(1H-pyrazol-4-yl)-5H-pyrrolo[2,3-b]pyrazine, Mitogen-activated protein kinase 1
Authors:Yin, J, Wang, W.
Deposit date:2014-06-22
Release date:2015-09-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:Fragment-based discovery of potent ERK2 pyrrolopyrazine inhibitors.
Bioorg.Med.Chem.Lett., 25, 2015
8PM3
DownloadVisualize
BU of 8pm3 by Molmil
Crystal structure of MAP2K6 with a covalent compound GCL94
Descriptor: Dual specificity mitogen-activated protein kinase kinase 6, ~{N}-[3-(2-azanylpyridin-4-yl)phenyl]propanamide
Authors:Wang, G.Q, Seidler, N, Roehm, S, Gehringer, M, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2023-06-28
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of MAP2K6 with a covalent compound GCL94
To Be Published
6HBN
DownloadVisualize
BU of 6hbn by Molmil
HIGH-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA/CSKN2A1 GENE PRODUCT) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR THN27
Descriptor: 5-propan-2-yl-4-prop-2-enoxy-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione, CHLORIDE ION, Casein kinase II subunit alpha, ...
Authors:Niefind, K, Hochscherf, J, Dimper, V, Witulski, B, Lindenblatt, D, Jose, J, Le Borgne, M.
Deposit date:2018-08-10
Release date:2019-03-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Diacritic Binding of an Indenoindole Inhibitor by CK2 alpha Paralogs Explored by a Reliable Path to Atomic Resolution CK2 alpha ' Structures.
Acs Omega, 4, 2019
4Q2A
DownloadVisualize
BU of 4q2a by Molmil
WNK1: A chloride sensor via autophosphorylation
Descriptor: BROMIDE ION, Serine/threonine-protein kinase WNK1
Authors:Piala, A, Moon, T, Akella, R, He, H, Cobb, M.H, Goldsmith, E.
Deposit date:2014-04-07
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Chloride Sensing by WNK1 Involves Inhibition of Autophosphorylation.
Sci.Signal., 7, 2014
6YV6
DownloadVisualize
BU of 6yv6 by Molmil
Crystal Structure of Serine protease SplB N2K/N3Q/S154R from Staphylococcus aureus
Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, Serine protease
Authors:Rangel Pereira, M.R, Brear, P, Knyphausen, P, Jermutus, L, Hollfelder, F.
Deposit date:2020-04-27
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Crystal Structure of Serine protease SplB N2K/N3Q/S154R from Staphylococcus aureus
to be published
4Q7X
DownloadVisualize
BU of 4q7x by Molmil
Neutrophil serine protease 4 (PRSS57) apo form 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Serine protease 57, ...
Authors:Eigenbrot, C, Lin, S.J, Dong, K.C.
Deposit date:2014-04-25
Release date:2014-09-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structures of neutrophil serine protease 4 reveal an unusual mechanism of substrate recognition by a trypsin-fold protease.
Structure, 22, 2014
8PVO
DownloadVisualize
BU of 8pvo by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric compound FG5
Descriptor: 1,2-ETHANEDIOL, 2-[1-(1,3-benzothiazol-6-ylsulfonyl)piperidin-4-yl]-~{N}-[(3-chloranyl-4-phenyl-phenyl)methyl]ethanamine, Casein kinase II subunit alpha, ...
Authors:Kraemer, A, Greco, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2023-07-18
Release date:2023-09-20
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Synthesis and evaluation of chemical linchpins for highly selective CK2 alpha targeting.
Eur.J.Med.Chem., 276, 2024
6U3K
DownloadVisualize
BU of 6u3k by Molmil
The crystal structure of 4-(pyridin-2-yl)benzoate-bound CYP199A4
Descriptor: 4-(pyridin-2-yl)benzoic acid, CHLORIDE ION, Cytochrome P450, ...
Authors:Podgorski, M.N, Bruning, J.B, Bell, S.G.
Deposit date:2019-08-21
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biophysical Techniques for Distinguishing Ligand Binding Modes in Cytochrome P450 Monooxygenases.
Biochemistry, 59, 2020
8PH7
DownloadVisualize
BU of 8ph7 by Molmil
X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DPhF)(O2CCH3)3] in condition A
Descriptor: Lysozyme C, SODIUM ION, SUCCINIC ACID, ...
Authors:Teran, A, Ferraro, G, Merlino, A.
Deposit date:2023-06-19
Release date:2023-09-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.406 Å)
Cite:Steric hindrance and charge influence on the cytotoxic activity and protein binding properties of diruthenium complexes.
Int.J.Biol.Macromol., 253, 2023
8PH6
DownloadVisualize
BU of 8ph6 by Molmil
X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(DPhF)(CO3)3] in condition B
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lysozyme C, Ru2(DPhF)(CO3)2(Formate), ...
Authors:Teran, A, Ferraro, G, Merlino, A.
Deposit date:2023-06-19
Release date:2023-09-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Steric hindrance and charge influence on the cytotoxic activity and protein binding properties of diruthenium complexes.
Int.J.Biol.Macromol., 253, 2023
6HGL
DownloadVisualize
BU of 6hgl by Molmil
Crystal structure of Alpha1-antichymotrypsin variant NewBG-III: a new binding globulin in complex with testosterone
Descriptor: Alpha-1-antichymotrypsin, TESTOSTERONE
Authors:Schmidt, K, Muller, Y.A.
Deposit date:2018-08-23
Release date:2019-05-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:NewBG: A surrogate corticosteroid-binding globulin with an unprecedentedly high ligand release efficacy.
J.Struct.Biol., 207, 2019
4QAG
DownloadVisualize
BU of 4qag by Molmil
Structure of a dihydroxycoumarin active-site inhibitor in complex with the RNASE H domain of HIV-1 reverse transcriptase
Descriptor: (7,8-dihydroxy-2-oxo-2H-chromen-4-yl)acetic acid, MANGANESE (II) ION, Reverse transcriptase/ribonuclease H
Authors:Himmel, D.M, Ho, W.C, Arnold, E.
Deposit date:2014-05-04
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.712 Å)
Cite:Structure of a Dihydroxycoumarin Active-Site Inhibitor in Complex with the RNase H Domain of HIV-1 Reverse Transcriptase and Structure-Activity Analysis of Inhibitor Analogs.
J.Mol.Biol., 426, 2014
8PH8
DownloadVisualize
BU of 8ph8 by Molmil
X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DPhF)2(O2CCH3)2] in condition A
Descriptor: 1-oxidanyl-2,4,6,8-tetraphenyl-2,4,6,8-tetraza-1$l^{4},5$l^{3}-diruthenabicyclo[3.3.0]octane, Lysozyme C, SODIUM ION, ...
Authors:Teran, A, Ferraro, G, Merlino, A.
Deposit date:2023-06-19
Release date:2023-09-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Steric hindrance and charge influence on the cytotoxic activity and protein binding properties of diruthenium complexes.
Int.J.Biol.Macromol., 253, 2023
5EXL
DownloadVisualize
BU of 5exl by Molmil
FACTOR XIA IN COMPLEX WITH THE INHIBITOR 4-(aminomethyl)-~{N}-[(1~{S})-1-[4-(3-oxidanyl-1~{H}-indazol-5-yl)pyridin-2-yl]-2-phenyl-ethyl]cyclohexane-1-carboxamide
Descriptor: 1,2-ETHANEDIOL, 4-(aminomethyl)-~{N}-[(1~{S})-1-[4-(3-oxidanyl-1~{H}-indazol-5-yl)pyridin-2-yl]-2-phenyl-ethyl]cyclohexane-1-carboxamide, Coagulation factor XIa light chain, ...
Authors:Wei, A.
Deposit date:2015-11-23
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Orally bioavailable pyridine and pyrimidine-based Factor XIa inhibitors: Discovery of the methyl N-phenyl carbamate P2 prime group
Bioorg.Med.Chem., 24, 2016

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon