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7M05
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BU of 7m05 by Molmil
CryoEM structure of PRMT5 bound to covalent PBM-site inhibitor BRD-6988
Descriptor: 2-(5-chloro-6-oxopyridazin-1(6H)-yl)-N-(4-methyl-3-{[2-(pyridin-2-yl)ethyl]sulfamoyl}phenyl)acetamide, Methylosome protein 50, Protein arginine N-methyltransferase 5
Authors:McMillan, B.J, McKinney, D.C, Timm, D.E.
Deposit date:2021-03-10
Release date:2021-03-17
Last modified:2021-08-25
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Discovery of a First-in-Class Inhibitor of the PRMT5-Substrate Adaptor Interaction.
J.Med.Chem., 64, 2021
5MTV
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BU of 5mtv by Molmil
Active structure of EHD4 complexed with ATP-gamma-S
Descriptor: EH domain-containing protein 4, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Melo, A.A, Daumke, O.
Deposit date:2017-01-10
Release date:2017-03-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural insights into the activation mechanism of dynamin-like EHD ATPases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5FTJ
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BU of 5ftj by Molmil
Cryo-EM structure of human p97 bound to UPCDC30245 inhibitor
Descriptor: 1-(3-(5-FLUORO-1H-INDOL-2-YL)PHENYL)PIPERIDIN-4-YL)(2-(4-ISOPROPYL-PIPERAZIN1-YL)ETHYL)-CARBAMATE, ADENOSINE-5'-DIPHOSPHATE, TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE
Authors:Banerjee, S, Bartesaghi, A, Merk, A, Rao, P, Bulfer, S.L, Yan, Y, Green, N, Mroczkowski, B, Neitz, R.J, Wipf, P, Falconieri, V, Deshaies, R.J, Milne, J.L.S, Huryn, D, Arkin, M, Subramaniam, S.
Deposit date:2016-01-14
Release date:2016-01-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:2.3 A Resolution Cryo-Em Structure of Human P97 and Mechanism of Allosteric Inhibition
Science, 351, 2016
5MUN
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BU of 5mun by Molmil
Structural insight into zymogenic latency of gingipain K from Porphyromonas gingivalis.
Descriptor: AZIDE ION, Lys-gingipain W83
Authors:Pomowski, A, Uson, I, Nowakovska, Z, Veillard, F, Sztukowska, M.N, Guevara, T, Goulas, T, Mizgalska, D, Nowak, M, Potempa, B, Huntington, J.A, Potempa, J, Gomis-Ruth, F.X.
Deposit date:2017-01-13
Release date:2017-02-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights unravel the zymogenic mechanism of the virulence factor gingipain K from Porphyromonas gingivalis, a causative agent of gum disease from the human oral microbiome.
J. Biol. Chem., 292, 2017
6C85
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BU of 6c85 by Molmil
Crystal structure of aspartate semialdehyde dehydrogenase from Blastomyces dermatitidis with p-benzoquinone
Descriptor: 1,4-benzoquinone, Aspartate-semialdehyde dehydrogenase
Authors:Dahal, G.P, Viola, R.E.
Deposit date:2018-01-24
Release date:2019-01-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into inhibitor binding to a fungal ortholog of aspartate semialdehyde dehydrogenase.
Biochem.Biophys.Res.Commun., 503, 2018
5FVG
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BU of 5fvg by Molmil
Structure of IrisFP at 100 K.
Descriptor: Green to red photoconvertible GFP-like protein EosFP, SULFATE ION
Authors:Colletier, J.P, Gallat, F.X, Coquelle, N, Weik, M.
Deposit date:2016-02-07
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Serial Femtosecond Crystallography and Ultrafast Absorption Spectroscopy of the Photoswitchable Fluorescent Protein Irisfp.
J.Phys.Chem.Lett, 7, 2016
6C8F
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BU of 6c8f by Molmil
Crystal structure of Transient Receptor Potential (TRP) channel TRPV4 in the presence of cesium
Descriptor: CESIUM ION, Transient receptor potential cation channel, subfamily V, ...
Authors:Deng, Z, Paknejad, N, Maksaev, G, Sala-Rabanal, M, Nichols, C.G, Hite, R.K, Yuan, P.
Deposit date:2018-01-24
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (6.5 Å)
Cite:Cryo-EM and X-ray structures of TRPV4 reveal insight into ion permeation and gating mechanisms.
Nat. Struct. Mol. Biol., 25, 2018
7OL9
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BU of 7ol9 by Molmil
Crystal structure of C-terminally truncated Bacillus subtilis nucleoid occlusion protein (Noc) complexed to the Noc-binding site (NBS)
Descriptor: DNA (5'-D(*TP*AP*TP*TP*TP*CP*CP*CP*GP*GP*GP*AP*AP*AP*TP*A)-3'), Nucleoid occlusion protein
Authors:Jalal, A.S.B, Lawson, D.M, Le, T.B.K.
Deposit date:2021-05-19
Release date:2022-03-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The CTP-binding domain is disengaged from the DNA-binding domain in a cocrystal structure of Bacillus subtilis Noc-DNA complex.
J.Biol.Chem., 299, 2023
1AIZ
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BU of 1aiz by Molmil
STRUCTURE OF APO-AZURIN FROM ALCALIGENES DENITRIFICANS AT 1.8 ANGSTROMS RESOLUTION
Descriptor: AZURIN, CADMIUM ION, SULFATE ION
Authors:Baker, E.N, Anderson, B.F, Blackwell, K.A.
Deposit date:1993-11-11
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of apo-azurin from Alcaligenes denitrificans at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 49, 1993
7UJV
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BU of 7ujv by Molmil
Structure of PHD2 in complex with HIF2a-CODD
Descriptor: Egl nine homolog 1, Endothelial PAS domain-containing protein 1, FE (III) ION, ...
Authors:Ferens, F.G, Tarade, D, Lee, J.E, Ohh, M.
Deposit date:2022-03-31
Release date:2023-04-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deficiency in PHD2-mediated hydroxylation of HIF2 alpha underlies Pacak-Zhuang syndrome.
Commun Biol, 7, 2024
5DN2
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BU of 5dn2 by Molmil
Human NRP2 b1 domain in complex with the peptide corresponding to the C-terminus of VEGF-A
Descriptor: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, Neuropilin-2, ...
Authors:Tsai, Y.C.I, Frankel, P, Fotinou, C, Rana, R, Zachary, I, Djordjevic, S.
Deposit date:2015-09-09
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural studies of neuropilin-2 reveal a zinc ion binding site remote from the vascular endothelial growth factor binding pocket.
Febs J., 283, 2016
1FW3
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BU of 1fw3 by Molmil
OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI
Descriptor: OUTER MEMBRANE PHOSPHOLIPASE A
Authors:Snijder, H.J, Kingma, R.L, Kalk, K.H, Dekker, N, Egmond, M.R, Dijkstra, B.W.
Deposit date:2000-09-21
Release date:2001-06-01
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural investigations of calcium binding and its role in activity and activation of outer membrane phospholipase A from Escherichia coli.
J.Mol.Biol., 309, 2001
5DOE
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BU of 5doe by Molmil
Crystal structure of the Human Cytomegalovirus UL53 (residues 72-292)
Descriptor: Virion egress protein UL31 homolog, ZINC ION
Authors:Lye, M.F, El Omari, K, Filman, D.J, Hogle, J.M.
Deposit date:2015-09-11
Release date:2015-11-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Unexpected features and mechanism of heterodimer formation of a herpesvirus nuclear egress complex.
Embo J., 34, 2015
6JPB
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BU of 6jpb by Molmil
Rabbit Cav1.1-Diltiazem Complex
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhao, Y, Huang, G, Wu, J, Yan, N.
Deposit date:2019-03-26
Release date:2019-06-12
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular Basis for Ligand Modulation of a Mammalian Voltage-Gated Ca2+Channel.
Cell, 177, 2019
6C8G
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BU of 6c8g by Molmil
Crystal structure of Transient Receptor Potential (TRP) channel TRPV4 in the presence of barium
Descriptor: BARIUM ION, Transient receptor potential cation channel, subfamily V, ...
Authors:Deng, Z, Paknejad, N, Maksaev, G, Sala-Rabanal, M, Nichols, C.G, Hite, R.K, Yuan, P.
Deposit date:2018-01-24
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (6.31 Å)
Cite:Cryo-EM and X-ray structures of TRPV4 reveal insight into ion permeation and gating mechanisms.
Nat. Struct. Mol. Biol., 25, 2018
6UMH
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BU of 6umh by Molmil
Crystal structure of erenumab Fab-a
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,3-PROPANDIOL, PHOSPHATE ION, ...
Authors:Mohr, C.
Deposit date:2019-10-09
Release date:2020-02-12
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular Insight into Recognition of the CGRPR Complex by Migraine Prevention Therapy Aimovig (Erenumab).
Cell Rep, 30, 2020
6C99
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BU of 6c99 by Molmil
Crystal structure of FcRn bound to UCB-303
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, CITRIC ACID, ...
Authors:Fox III, D, Abendroth, J, Porter, J, Deboves, H.
Deposit date:2018-01-25
Release date:2018-05-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insight into small molecule binding to the neonatal Fc receptor by X-ray crystallography and 100 kHz magic-angle-spinning NMR.
PLoS Biol., 16, 2018
6JCT
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BU of 6jct by Molmil
AAV5 in neutral condition at 3.18 Ang
Descriptor: Capsid protein
Authors:Lou, Z, Zhang, R.
Deposit date:2019-01-30
Release date:2019-07-31
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Divergent engagements between adeno-associated viruses with their cellular receptor AAVR.
Nat Commun, 10, 2019
6TQL
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BU of 6tql by Molmil
Cryo-EM of elastase-treated human uromodulin (UMOD)/Tamm-Horsfall protein (THP) filament
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Stsiapanava, A, Xu, C, Carroni, M, Wu, B, Jovine, L.
Deposit date:2019-12-16
Release date:2020-11-04
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Cryo-EM structure of native human uromodulin, a zona pellucida module polymer.
Embo J., 39, 2020
6TU4
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BU of 6tu4 by Molmil
Structure of Plasmodium Actin1 filament
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-1, Jasplakinolide, ...
Authors:Vahokoski, J, Calder, L.J, Lopez, A.J, Rosenthal, P.B, Kursula, I.
Deposit date:2020-01-02
Release date:2021-01-13
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:High-resolution structures of malaria parasite actomyosin and actin filaments.
Plos Pathog., 18, 2022
6CBK
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BU of 6cbk by Molmil
X-ray structure of NeoB from Streptomyces fradiae in complex with PMP
Descriptor: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Neamine transaminase NeoN, ...
Authors:Thoden, J.B, Dow, G.T, Holden, H.M.
Deposit date:2018-02-03
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The three-dimensional structure of NeoB: An aminotransferase involved in the biosynthesis of neomycin.
Protein Sci., 27, 2018
6BML
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BU of 6bml by Molmil
Structure of human DHHC20 palmitoyltransferase, irreversibly inhibited by 2-bromopalmitate
Descriptor: 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, PALMITIC ACID, PHOSPHATE ION, ...
Authors:Rana, M.S, Lee, C.-J, Banerjee, A.
Deposit date:2017-11-15
Release date:2018-01-24
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Fatty acyl recognition and transfer by an integral membraneS-acyltransferase.
Science, 359, 2018
6BMU
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BU of 6bmu by Molmil
Non-receptor Protein Tyrosine Phosphatase SHP2 in Complex with Allosteric Inhibitors SHP099 and SHP244
Descriptor: 4-[(2-chlorophenyl)methyl]-1-(2-hydroxy-3-methoxyphenyl)[1,2,4]triazolo[4,3-a]quinazolin-5(4H)-one, 6-(4-azanyl-4-methyl-piperidin-1-yl)-3-[2,3-bis(chloranyl)phenyl]pyrazin-2-amine, GLYCEROL, ...
Authors:Stams, T, Fodor, M.
Deposit date:2017-11-15
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Dual Allosteric Inhibition of SHP2 Phosphatase.
ACS Chem. Biol., 13, 2018
6JPR
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BU of 6jpr by Molmil
Crystal structure of Phycocyanin from Nostoc sp. R76DM
Descriptor: GLYCEROL, PHYCOCYANOBILIN, Phycocyanin, ...
Authors:Sonani, R.R, Gupta, G.D, Rastogi, R.P, Patel, S.N, Madamwar, D, Kumar, V.
Deposit date:2019-03-27
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Phylogenetic and crystallographic analysis of Nostoc phycocyanin having blue-shifted spectral properties.
Sci Rep, 9, 2019
6BHD
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BU of 6bhd by Molmil
Crystal structure of SETDB1 with a modified H3 peptide
Descriptor: Histone H3.1, Histone-lysine N-methyltransferase SETDB1, SODIUM ION, ...
Authors:Qin, S, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-10-30
Release date:2017-12-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1.
Nat Commun, 8, 2017

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