Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1UOK
DownloadVisualize
BU of 1uok by Molmil
CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE
Descriptor: OLIGO-1,6-GLUCOSIDASE
Authors:Watanabe, K, Hata, Y, Kizaki, H, Katsube, Y, Suzuki, Y.
Deposit date:1998-07-28
Release date:1999-02-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The refined crystal structure of Bacillus cereus oligo-1,6-glucosidase at 2.0 A resolution: structural characterization of proline-substitution sites for protein thermostabilization.
J.Mol.Biol., 269, 1997
2ZVU
DownloadVisualize
BU of 2zvu by Molmil
Crystal structure of rat heme oxygenase-1 in complex with ferrous verdoheme
Descriptor: 5-OXA-PROTOPORPHYRIN IX CONTAINING FE, FORMIC ACID, Heme oxygenase 1
Authors:Sato, H, Sugishima, M, Fukuyama, K, Noguchi, M.
Deposit date:2008-11-21
Release date:2009-02-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of rat haem oxygenase-1 in complex with ferrous verdohaem: presence of a hydrogen-bond network on the distal side
Biochem.J., 419, 2009
3POF
DownloadVisualize
BU of 3pof by Molmil
Crystal structure of MASP-1 CUB2 domain bound to Ca2+
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Mannan-binding lectin serine protease 1, ...
Authors:Gingras, A.R, Moody, P.C.E, Wallis, R.
Deposit date:2010-11-22
Release date:2011-08-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structural Basis of Mannan-Binding Lectin Recognition by Its Associated Serine Protease MASP-1: Implications for Complement Activation.
Structure, 19, 2011
2ZA4
DownloadVisualize
BU of 2za4 by Molmil
Crystal Structural Analysis of Barnase-barstar Complex
Descriptor: Barstar, CHLORIDE ION, Ribonuclease
Authors:Urakubo, Y, Ikura, T, Ito, N.
Deposit date:2007-10-01
Release date:2008-05-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structural analysis of protein-protein interactions drastically destabilized by a single mutation
Protein Sci., 17, 2008
3TEA
DownloadVisualize
BU of 3tea by Molmil
Crystal structure of Arthrobacter sp. strain su 4-hydroxybenzoyl CoA thioesterase double mutant Q58E/E73A complexed with 4-hydroxyphenacyl CoA
Descriptor: 4-HYDROXYPHENACYL COENZYME A, 4-hydroxybenzoyl-CoA thioesterase
Authors:Holden, H.M, Thoden, J.B, Song, F, Zhuang, Z, Trujillo, M, Dunaway-Mariano, D.
Deposit date:2011-08-12
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Catalytic Mechanism of the Hotdog-fold Enzyme Superfamily 4-Hydroxybenzoyl-CoA Thioesterase from Arthrobacter sp. Strain SU.
Biochemistry, 51, 2012
1U8R
DownloadVisualize
BU of 1u8r by Molmil
Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions
Descriptor: COBALT (II) ION, Iron-dependent repressor ideR, SODIUM ION, ...
Authors:Wisedchaisri, G, Holmes, R.K, Hol, W.G.J.
Deposit date:2004-08-06
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions.
J.Mol.Biol., 342, 2004
3AML
DownloadVisualize
BU of 3aml by Molmil
Structure of the Starch Branching Enzyme I (BEI) from Oryza sativa L
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Kakuta, Y, Chaen, K, Noguchi, J, Vu, N, Kimura, M.
Deposit date:2010-08-20
Release date:2011-09-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the branching enzyme I (BEI) from Oryza sativa L with implications for catalysis and substrate binding.
Glycobiology, 21, 2011
3U3I
DownloadVisualize
BU of 3u3i by Molmil
A RNA binding protein from Crimean-Congo hemorrhagic fever virus
Descriptor: Nucleocapsid protein
Authors:Guo, Y, Wang, W.M, Ji, W, Deng, M, Sun, Y.N, Lou, Z.Y, Rao, Z.H.
Deposit date:2011-10-06
Release date:2012-03-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Crimean-Congo hemorrhagic fever virus nucleoprotein reveals endonuclease activity in bunyaviruses
Proc.Natl.Acad.Sci.USA, 109, 2012
1VAH
DownloadVisualize
BU of 1vah by Molmil
Crystal structure of the pig pancreatic-amylase complexed with r-nitrophenyl-a-D-maltoside
Descriptor: Alpha-amylase, pancreatic, CALCIUM ION, ...
Authors:Zhuo, H, Payan, F, Qian, M.
Deposit date:2004-02-17
Release date:2005-04-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the pig pancreatic alpha-amylase complexed with rho-nitrophenyl-alpha-D-maltoside-flexibility in the active site
Protein J., 23, 2004
2Z2L
DownloadVisualize
BU of 2z2l by Molmil
Penicillin-Binding Protein 2X (PBP2X) from Streptococcus pneumoniae
Descriptor: Penicillin-binding protein 2X, SULFATE ION
Authors:Yamada, M, Watanabe, T, Takeuchi, Y.
Deposit date:2007-05-23
Release date:2007-09-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure of Cefditoren Complexed with Streptococcus pneumoniae Penicillin-Binding Protein 2X: Structural Basis for its High Antimicrobial Activity
Antimicrob.Agents Chemother., 51, 2007
2K2S
DownloadVisualize
BU of 2k2s by Molmil
structure of the MIC1-GLD/MIC6-EGF complex from Toxoplasma gondii
Descriptor: Micronemal protein 1, Micronemal protein 6
Authors:Matthews, S.
Deposit date:2008-04-11
Release date:2009-02-24
Last modified:2011-07-27
Method:SOLUTION NMR
Cite:Structural insights into microneme protein assembly reveal a new mode of EGF domain recognition
Embo Rep., 9, 2008
3V1Y
DownloadVisualize
BU of 3v1y by Molmil
Crystal structures of glyceraldehyde-3-phosphate dehydrogenase complexes with NAD
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Tien, Y.C, Chuankhayan, P, Lin, Y.H, Chang, S.L, Chen, C.J.
Deposit date:2011-12-10
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structures of rice (Oryza sativa) glyceraldehyde-3-phosphate dehydrogenase complexes with NAD and sulfate suggest involvement of Phe37 in NAD binding for catalysis
Plant Mol.Biol., 80, 2012
3OO6
DownloadVisualize
BU of 3oo6 by Molmil
Crystal structures and biochemical characterization of the bacterial solute receptor AcbH reveal an unprecedented exclusive substrate preference for b-D-galactopyranose
Descriptor: ABC transporter binding protein AcbH, SULFATE ION, beta-D-galactopyranose
Authors:Vahedi-Faridi, A, Bulut, H, Licht, A.
Deposit date:2010-08-30
Release date:2010-12-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of the bacterial solute receptor AcbH displaying an exclusive substrate preference for beta-D-galactopyranose
J.Mol.Biol., 406, 2011
1SQJ
DownloadVisualize
BU of 1sqj by Molmil
Crystal Structure Analysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH)
Descriptor: oligoxyloglucan reducing-end-specific cellobiohydrolase
Authors:Yaoi, K, Kondo, H, Noro, N, Suzuki, M, Tsuda, S, Mitsuishi, Y.
Deposit date:2004-03-19
Release date:2004-07-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Tandem Repeat of a Seven-Bladed beta-Propeller Domain in Oligoxyloglucan Reducing-End-Specific Cellobiohydrolase
Structure, 12, 2004
3D6G
DownloadVisualize
BU of 3d6g by Molmil
Fc fragment of IgG1 (Herceptin) with protein-A mimetic peptide dendrimer ligand.
Descriptor: 2-[[(2S)-2,6-bis[[(2S)-2,6-bis[[(2R)-2-[[(2R,3R)-2-[[(2R)-2-amino-5-carbamimidamido-pentanoyl]amino]-3-hydroxy-butanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]hexanoyl]amino]hexanoyl]amino]ethanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
Authors:Bujacz, A.D, Redzynia, I, Bujacz, G.D, Dinon, F, Pengo, P, Fassina, G.
Deposit date:2008-05-19
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of a Protein A mimetic peptide dendrimer bound to human IgG.
J.Phys.Chem.B, 113, 2009
2H92
DownloadVisualize
BU of 2h92 by Molmil
Crystal Structure of Staphylococcus aureus Cytidine Monophosphate Kinase in complex with cytidine-5'-monophosphate
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, Cytidylate kinase, SULFATE ION, ...
Authors:Dhaliwal, B.
Deposit date:2006-06-08
Release date:2006-08-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Staphylococcus aureus cytidine monophosphate kinase in complex with cytidine 5'-monophosphate.
Acta Crystallogr.,Sect.F, 62, 2006
1SEL
DownloadVisualize
BU of 1sel by Molmil
CRYSTAL STRUCTURE OF SELENOSUBTILISIN AT 2.0-ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, SELENOSUBTILISIN
Authors:Syed, R, Hogle, J.M, Hilvert, D.
Deposit date:1993-01-17
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of selenosubtilisin at 2.0-A resolution.
Biochemistry, 32, 1993
3D26
DownloadVisualize
BU of 3d26 by Molmil
Norwalk P domain A-trisaccharide complex
Descriptor: 58 kd capsid protein, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)]beta-D-galactopyranose
Authors:Hegde, R, Bu, W.
Deposit date:2008-05-07
Release date:2008-06-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
3AHW
DownloadVisualize
BU of 3ahw by Molmil
Crystal Structure of Ustilago sphaerogena Ribonuclease U2 complexed with adenosine 2'-monophosphate
Descriptor: ADENOSINE-2'-MONOPHOSPHATE, CALCIUM ION, Ribonuclease U2
Authors:Noguchi, S.
Deposit date:2010-05-04
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Conformational variation revealed by the crystal structure of RNase U2A complexed with Ca ion and 2'-adenylic acid at 1.03 angstrom resolution.
Protein Pept.Lett., 17, 2010
1VGI
DownloadVisualize
BU of 1vgi by Molmil
Crystal structure of xenon bound rat heme-heme oxygenase-1 complex
Descriptor: FORMIC ACID, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Sugishima, M, Sakamoto, H, Noguchi, M, Fukuyama, K.
Deposit date:2004-04-26
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:CO-trapping site in heme oxygenase revealed by photolysis of its co-bound heme complex: mechanism of escaping from product inhibition
J.Mol.Biol., 341, 2004
2LRS
DownloadVisualize
BU of 2lrs by Molmil
The second dsRBD domain from A. thaliana DICER-LIKE 1
Descriptor: Endoribonuclease Dicer homolog 1
Authors:Burdisso, P, Suarez, I, Bersch, B, Bologna, N, Palatnik, J, Boisbouvier, J, Rasia, R.
Deposit date:2012-04-12
Release date:2013-01-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Second Double-Stranded RNA Binding Domain of Dicer-like Ribonuclease 1: Structural and Biochemical Characterization.
Biochemistry, 51, 2012
7S70
DownloadVisualize
BU of 7s70 by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI34
Descriptor: (1R,2S,5S)-N-{(2S,3R)-4-(butylamino)-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
Authors:Yang, K.S, Sankaran, B, Liu, W.R.
Deposit date:2021-09-15
Release date:2022-07-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A systematic exploration of boceprevir-based main protease inhibitors as SARS-CoV-2 antivirals.
Eur.J.Med.Chem., 240, 2022
3EE7
DownloadVisualize
BU of 3ee7 by Molmil
Crystal Structure of SARS-CoV nsp9 G104E
Descriptor: GLYCEROL, PHOSPHATE ION, Replicase polyprotein 1a
Authors:Miknis, Z.J, Donaldson, E.F, Umland, T.C, Rimmer, R, Baric, R.S, Schultz, L.W.
Deposit date:2008-09-04
Release date:2009-03-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Severe acute respiratory syndrome coronavirus nsp9 dimerization is essential for efficient viral growth
J.Virol., 83, 2009
3E4C
DownloadVisualize
BU of 3e4c by Molmil
Procaspase-1 zymogen domain crystal structure
Descriptor: Caspase-1, MAGNESIUM ION
Authors:Elliott, J.M, Rouge, L, Wiesmann, C, Scheer, J.M.
Deposit date:2008-08-11
Release date:2008-12-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of procaspase-1 zymogen domain reveals insight into inflammatory caspase autoactivation
J.Biol.Chem., 284, 2009
3ENL
DownloadVisualize
BU of 3enl by Molmil
REFINED STRUCTURE OF YEAST APO-ENOLASE AT 2.25 ANGSTROMS RESOLUTION
Descriptor: ENOLASE, SULFATE ION
Authors:Lebioda, L, Stec, B.
Deposit date:1990-11-13
Release date:1992-04-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Refined structure of yeast apo-enolase at 2.25 A resolution.
J.Mol.Biol., 211, 1990

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon