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5ZTC
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BU of 5ztc by Molmil
Apo structure of TetR family transcription regulator Lmo2088 of Listeria monocytogenes EGDe
Descriptor: Lmo2088 protein, PENTAETHYLENE GLYCOL
Authors:Samad, A, Jin, T.
Deposit date:2018-05-02
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystal structure of putative transcription regulator lmo2088 from Listeria monocytogenes.
Biochem.Biophys.Res.Commun., 520, 2019
8VWT
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BU of 8vwt by Molmil
OGG1 bound to a nucleosome containing 8oxoG at SHL-6 (composite map)
Descriptor: 601 I strand (non-damaged strand), 601 J strand (damaged strand), Histone H2A type 1, ...
Authors:Weaver, T.M, Ling, J.A, Freudenthal, B.D.
Deposit date:2024-02-02
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:OGG1 bound to a nucleosome containing 8oxoG at SHL-6 (composite map)
To Be Published
8VWV
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BU of 8vwv by Molmil
OGG1 bound to a nucleosome containing 8oxoG at SHL4 (composite map)
Descriptor: 601 I strand (damaged strand), 601 J strand (non-damaged), Histone H2A type 1, ...
Authors:Weaver, T.M, Ling, J.A, Freudenthal, B.D.
Deposit date:2024-02-02
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:OGG1 bound to a nucleosome containing 8oxoG at SHL4 (composite map)
To Be Published
6NQA
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BU of 6nqa by Molmil
Active state Dot1L bound to the H2B-Ubiquitinated nucleosome, 1-to-1 complex
Descriptor: 601 DNA Strand 1, 601 DNA Strand 2, Histone H2A type 1, ...
Authors:Worden, E.J, Hoffmann, N.A, Wolberger, C.
Deposit date:2019-01-19
Release date:2019-02-20
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Mechanism of Cross-talk between H2B Ubiquitination and H3 Methylation by Dot1L.
Cell, 176, 2019
5F4N
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BU of 5f4n by Molmil
Multi-parameter lead optimization to give an oral CHK1 inhibitor clinical candidate: (R)-5-((4-((morpholin-2-ylmethyl)amino)-5-(trifluoromethyl)pyridin-2-yl)amino)pyrazine-2-carbonitrile (CCT245737)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Serine/threonine-protein kinase Chk1, ...
Authors:Collins, I, Garrett, M.D, van Montfort, R, Osborne, J.D, Matthews, T.P, McHardy, T, Proisy, N, Cheung, K.J, Lainchbury, M, Brown, N, Walton, M.I, Eve, P.D, Boxall, K.J, Hayes, A, Henley, A.T, Valenti, M.R, De Haven Brandon, A.K, Box, G, Westwood, I.M, Jamin, Y, Robinson, S.P, Leonard, P, Reader, J.C, Aherne, G.W, Raynaud, F.I, Eccles, S.A.
Deposit date:2015-12-03
Release date:2016-05-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Multiparameter Lead Optimization to Give an Oral Checkpoint Kinase 1 (CHK1) Inhibitor Clinical Candidate: (R)-5-((4-((Morpholin-2-ylmethyl)amino)-5-(trifluoromethyl)pyridin-2-yl)amino)pyrazine-2-carbonitrile (CCT245737).
J.Med.Chem., 59, 2016
4MH8
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BU of 4mh8 by Molmil
The crystal structure of the monomeric reverse transcriptase from moloney murine leukemia virus
Descriptor: Reverse transcriptase/ribonuclease H p80
Authors:Das, D, Georgiadis, M.M.
Deposit date:2013-08-29
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of the monomeric reverse transcriptase from Moloney murine leukemia virus.
Structure, 12, 2004
8IUD
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BU of 8iud by Molmil
Crystal Structure of bacterial defense protein GajB
Descriptor: Gabija protein GajB
Authors:Oh, H, Bae, E.
Deposit date:2023-03-24
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional investigation of GajB protein in Gabija anti-phage defense.
Nucleic Acids Res., 51, 2023
8IMW
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BU of 8imw by Molmil
Crystal structure of response regulator PmrA receiver domain
Descriptor: Transcriptional regulator
Authors:Ouyang, Z, Wen, Y.
Deposit date:2023-03-07
Release date:2024-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanistic and biophysical characterization of polymyxin resistance response regulator PmrA in Acinetobacter baumannii.
Front Microbiol, 15, 2024
4Y13
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BU of 4y13 by Molmil
SdiA in complex with octanoyl-rac-glycerol
Descriptor: (2S)-2,3-dihydroxypropyl octanoate, GLYCEROL, SULFATE ION, ...
Authors:Nguyen, N.X, Nguyen, Y, Sperandio, V, Jiang, Y.
Deposit date:2015-02-06
Release date:2015-04-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.096 Å)
Cite:Structural and Mechanistic Roles of Novel Chemical Ligands on the SdiA Quorum-Sensing Transcription Regulator.
Mbio, 6, 2015
8G6Q
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BU of 8g6q by Molmil
H2AK119ub-modified nucleosome ubiquitin position 1
Descriptor: 601 DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Hicks, C.W, Wolberger, C, Keogh, M.
Deposit date:2023-02-15
Release date:2024-02-21
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.
Nucleic Acids Res., 52, 2024
8G6S
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BU of 8g6s by Molmil
H2AK119ub-modified nucleosome ubiquitin position 2
Descriptor: 601 DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Hicks, C.W, Wolberger, C, Keogh, M.
Deposit date:2023-02-15
Release date:2024-02-21
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.
Nucleic Acids Res., 52, 2024
1PVU
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BU of 1pvu by Molmil
THE CRYSTAL STRUCTURE OF PVUII ENDONUCLEASE REVEALS EXTENSIVE STRUCTURAL HOMOLOGIES TO ECORV
Descriptor: Pvu II
Authors:Vlassi, M, Athanasiadis, A.
Deposit date:1995-03-09
Release date:1995-03-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV.
Nat.Struct.Biol., 1, 1994
7UJ1
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BU of 7uj1 by Molmil
Crystal structure of PSF-RNA complex
Descriptor: RNA (30-MER), Splicing factor, proline- and glutamine-rich
Authors:Sachpatzidis, A, Wang, J, Konigsberg, W.H.
Deposit date:2022-03-30
Release date:2022-09-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Insight into the Tumor Suppression Mechanism from the Structure of Human Polypyrimidine Splicing Factor (PSF/SFPQ) Complexed with a 30mer RNA from Murine Virus-like 30S Transcript-1.
Biochemistry, 61, 2022
4DRA
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BU of 4dra by Molmil
Crystal structure of MHF complex
Descriptor: Centromere protein S, Centromere protein X
Authors:Tao, Y, Niu, L, Teng, M.
Deposit date:2012-02-17
Release date:2012-05-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.414 Å)
Cite:The structure of the FANCM-MHF complex reveals physical features for functional assembly
Nat Commun, 3, 2012
1LJ9
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BU of 1lj9 by Molmil
The crystal structure of the transcriptional regulator SlyA
Descriptor: transcriptional regulator SlyA
Authors:Wu, R.Y, Zhang, R.G, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-04-19
Release date:2003-01-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Enterococcus faecalis SlyA-like transcriptional factor
J.Biol.Chem., 278, 2003
3P56
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BU of 3p56 by Molmil
The structure of the human RNase H2 complex defines key interaction interfaces relevant to enzyme function and human disease
Descriptor: Ribonuclease H2 subunit A, Ribonuclease H2 subunit B, Ribonuclease H2 subunit C
Authors:Bubeck, D, Graham, S.C, Jones, E.Y.
Deposit date:2010-10-08
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (4.06 Å)
Cite:The Structure of the Human RNase H2 Complex Defines Key Interaction Interfaces Relevant to Enzyme Function and Human Disease.
J.Biol.Chem., 286, 2011
1XP8
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BU of 1xp8 by Molmil
Deinococcus radiodurans RecA in complex with ATP-gamma-S
Descriptor: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, RecA protein
Authors:Bell, C.E, Rajan, R.
Deposit date:2004-10-08
Release date:2004-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of RecA from Deinococcus radiodurans: insights into the structural basis of extreme radioresistance.
J.Mol.Biol., 344, 2004
2W42
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BU of 2w42 by Molmil
THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX.
Descriptor: 5'-D(*GP*TP*CP*GP*AP*AP*TP*TP)-3', 5'-D(*TP*TP*CP*GP*AP*CP*GP*CP)-3', MANGANESE (II) ION, ...
Authors:Parker, J.S, Roe, S.M, Barford, D.
Deposit date:2008-11-19
Release date:2008-12-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enhancement of the Seed-Target Recognition Step in RNA Silencing by a Piwi-Mid Domain Protein
Mol.Cell, 33, 2009
7K7T
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BU of 7k7t by Molmil
Crystal structure of human MORC4 ATPase-CW in complex with AMPPNP
Descriptor: Isoform 3 of MORC family CW-type zinc finger protein 4, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Klein, B.J, Tencer, A.H, Kutateladze, T.G.
Deposit date:2020-09-24
Release date:2020-11-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Molecular mechanism of the MORC4 ATPase activation.
Nat Commun, 11, 2020
7VII
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BU of 7vii by Molmil
cryoEM structure of bacteriophage lambda capsid at 5.6 Angstrom
Descriptor: Capsid decoration protein, Major capsid protein
Authors:Wang, J.W.
Deposit date:2021-09-27
Release date:2021-12-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
7VIK
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BU of 7vik by Molmil
Asymmetric unit of cryoEM structure of bacteriophage lambda capsid at 3.76 Angstrom
Descriptor: Capsid decoration protein, Major capsid protein
Authors:Wang, J.W.
Deposit date:2021-09-27
Release date:2021-12-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
4WWX
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BU of 4wwx by Molmil
Crystal structure of the core RAG1/2 recombinase
Descriptor: V(D)J recombination-activating protein 1, V(D)J recombination-activating protein 2, ZINC ION
Authors:Kim, M.S, Lapkouski, M, Yang, W, Gellert, M.
Deposit date:2014-11-12
Release date:2015-02-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2001 Å)
Cite:Crystal structure of the V(D)J recombinase RAG1-RAG2.
Nature, 518, 2015
2HVS
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BU of 2hvs by Molmil
Structure of T4 RNA Ligase 2 with Nicked 5'-Adenylated nucleic acid duplex containing a 2'-deoxyribonucleotide at the nick
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*TP*TP*G)-3', 5'-D(*CP*AP*AP*TP*TP*GP*CP*GP*AP*C)-R(P*(OMC)P*C)-3', ...
Authors:Nandakumar, J, Lima, C.D.
Deposit date:2006-07-30
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:RNA Ligase Structures Reveal the Basis for RNA Specificity and Conformational Changes that Drive Ligation Forward.
Cell(Cambridge,Mass.), 127, 2006
2HVR
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BU of 2hvr by Molmil
Structure of T4 RNA Ligase 2 with Nicked 5'-Adenylated nucleic acid duplex containing a 3'-deoxyribonucleotide at the nick
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*TP*TP*G)-3', 5'-D(*CP*AP*AP*TP*TP*GP*CP*GP*AP*C)-R(P*(OMC)P*C)-3', ...
Authors:Nandakumar, J, Lima, C.D.
Deposit date:2006-07-30
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:RNA Ligase Structures Reveal the Basis for RNA Specificity and Conformational Changes that Drive Ligation Forward.
Cell(Cambridge,Mass.), 127, 2006
8A1H
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BU of 8a1h by Molmil
Bacterial 6-4 photolyase from Vibrio cholerase
Descriptor: 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6-4 photolyase (FeS-BCP, ...
Authors:Essen, L.-O, Emmerich, H.J.
Deposit date:2022-06-01
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and Functional Analysis of a Prokaryotic (6-4) Photolyase from the Aquatic Pathogen Vibrio Cholerae † .
Photochem.Photobiol., 99, 2023

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