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1JKP
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Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
Descriptor: 5'-D(*AP*TP*CP*TP*TP*CP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*GP*AP*AP*GP*A)-3', DNA-INVERTASE HIN
Authors:Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
Deposit date:2001-07-13
Release date:2002-02-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
2F9V
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BU of 2f9v by Molmil
HCV NS3 protease domain with NS4a peptide and a ketoamide inhibitor with P1 and P2 cyclopropylalannines
Descriptor: (2S,8R,9S,15S)-15-CYCLOHEXYL-9,12-BIS(CYCLOPROPYLMETHYL)-8-HYDROXY-20-METHYL-4,7,11,14,17-PENTAOXO-2-PHENYL-18-OXA-3,6,10,12,13,16-HEXAAZAHENICOSAN-1-OIC ACID, NS3 protease/helicase, ZINC ION, ...
Authors:Bogen, S.L, Ruan, S, Liu, R, Agrawal, S, Pichardo, J, Prongay, A, Baroudy, B, Saksena, A, Girijavallabhan, V, Njoroge, F.G.
Deposit date:2005-12-06
Release date:2007-01-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Depeptidization efforts on P3-P2 a-ketoamide inhibitors of HCV NS3-4A serine protease: Effect on HCV replicon activity.
Bioorg.Med.Chem.Lett., 16, 2006
1MHT
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BU of 1mht by Molmil
COVALENT TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE, DNA AND S-ADENOSYL-L-HOMOCYSTEINE
Descriptor: DNA (5'-D(*TP*GP*AP*TP*AP*GP*(C36)P*GP*CP*TP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*AP*GP*(C36)P*GP*CP*TP*AP*TP*C)-3'), PROTEIN (HHAI METHYLTRANSFERASE), ...
Authors:Cheng, X.
Deposit date:1994-12-08
Release date:1995-06-03
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:HhaI methyltransferase flips its target base out of the DNA helix.
Cell(Cambridge,Mass.), 76, 1994
2CV2
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BU of 2cv2 by Molmil
Glutamyl-tRNA synthetase from Thermus thermophilus in complex with tRNA(Glu) and an enzyme inhibitor, Glu-AMS
Descriptor: CHLORIDE ION, MAGNESIUM ION, O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE, ...
Authors:Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-31
Release date:2006-09-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural bases of transfer RNA-dependent amino acid recognition and activation by glutamyl-tRNA synthetase
Structure, 14, 2006
2FIV
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Crystal structure of feline immunodeficiency virus protease complexed with a substrate
Descriptor: ACE-ALN-VAL-STA-GLU-ALN-NH2, FELINE IMMUNODEFICIENCY VIRUS PROTEASE, SULFATE ION
Authors:Schalk-Hihi, C, Lubkowski, J, Zdanov, A, Wlodawer, A, Gustchina, A.
Deposit date:1997-07-21
Release date:1997-11-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the inactive D30N mutant of feline immunodeficiency virus protease complexed with a substrate and an inhibitor.
Biochemistry, 36, 1997
2FHI
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SUBSTRATE ANALOG (IB2) COMPLEX WITH THE HIS 96 ASN SUBSTITUTION OF THE FRAGILE HISTIDINE TRIAD PROTEIN, FHIT
Descriptor: FRAGILE HISTIDINE TRIAD PROTEIN, P1-P2-METHYLENE-P3-THIO-DIADENOSINE TRIPHOSPHATE
Authors:Pace, H.C, Garrison, P.N, Robinson, A.K, Barnes, L.D, Draganescu, A, Rosler, A, Blackburn, G.M, Siprashvili, Z, Croce, C.M, Heubner, K, Brenner, C.
Deposit date:1998-04-01
Release date:1998-06-17
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Genetic, biochemical, and crystallographic characterization of Fhit-substrate complexes as the active signaling form of Fhit.
Proc.Natl.Acad.Sci.USA, 95, 1998
2YBK
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BU of 2ybk by Molmil
JMJD2A COMPLEXED WITH R-2-HYDROXYGLUTARATE
Descriptor: (2R)-2-hydroxypentanedioic acid, CHLORIDE ION, LYSINE-SPECIFIC DEMETHYLASE 4A, ...
Authors:Chowdhury, R, McDonough, M.A, Schofield, C.J.
Deposit date:2011-03-08
Release date:2011-04-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases.
EMBO Rep., 12, 2011
2YQS
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BU of 2yqs by Molmil
Crystal structure of uridine-diphospho-N-acetylglucosamine pyrophosphorylase from Candida albicans, in the product-binding form
Descriptor: GLYCEROL, MAGNESIUM ION, SULFATE ION, ...
Authors:Miki, K, Maruyama, D, Nishitani, Y, Nonaka, T, Kita, A.
Deposit date:2007-03-30
Release date:2007-05-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Uridine-diphospho-N-acetylglucosamine Pyrophosphorylase from Candida albicans and Catalytic Reaction Mechanism
J.Biol.Chem., 282, 2007
2YSK
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Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus
Descriptor: Hypothetical protein TTHA1432, SULFATE ION
Authors:Okamoto, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2008-04-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus
To be Published
2YUT
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Crystal Structure of Putative Short-Chain Oxidoreductase TTHB094 from Thermus thermophilus HB8
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative short-chain oxidoreductase
Authors:Agari, Y, Shinkai, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Putative Short-Chain Oxidoreductase TTHB094 from Thermus thermophilus HB8
To be Published
7VSI
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BU of 7vsi by Molmil
Structure of human SGLT2-MAP17 complex bound with empagliflozin
Descriptor: (2S,3R,4R,5S,6R)-2-[4-chloranyl-3-[[4-[(3S)-oxolan-3-yl]oxyphenyl]methyl]phenyl]-6-(hydroxymethyl)oxane-3,4,5-triol, PALMITIC ACID, PDZK1-interacting protein 1, ...
Authors:Chen, L, Niu, Y, Liu, R.
Deposit date:2021-10-26
Release date:2021-12-15
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structural basis of inhibition of the human SGLT2-MAP17 glucose transporter.
Nature, 601, 2022
2YVW
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Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5
Descriptor: PHOSPHATE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
Authors:Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-16
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Aquifex aeolicus VF5
To be Published
2YWC
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BU of 2ywc by Molmil
Crystal structure of GMP synthetase from Thermus thermophilus in complex with XMP
Descriptor: GMP synthase [glutamine-hydrolyzing], XANTHOSINE-5'-MONOPHOSPHATE
Authors:Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of GMP synthetase from Thermus thermophilus
To be Published
2YT4
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BU of 2yt4 by Molmil
Crystal structure of human DGCR8 core
Descriptor: Protein DGCR8
Authors:Cho, Y, Sohn, S.Y.
Deposit date:2007-04-05
Release date:2007-08-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human DGCR8 core
Nat.Struct.Mol.Biol., 14, 2007
2YZM
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BU of 2yzm by Molmil
Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8
Descriptor: D-ALANINE, D-alanine--D-alanine ligase
Authors:Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8
To be Published
2Z06
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BU of 2z06 by Molmil
Crystal structure of uncharacterized conserved protein from Thermus thermophilus
Descriptor: COBALT (II) ION, Putative uncharacterized protein TTHA0625
Authors:Kanagawa, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermus thermophilus
To be Published
2YWA
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BU of 2ywa by Molmil
Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Descriptor: Hypothetical protein TTHA0048
Authors:Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2YWN
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Crystal structure of peroxiredoxin-like protein from Sulfolobus tokodaii
Descriptor: Peroxiredoxin-like protein
Authors:Ebihara, A, Manzoku, M, Fujimoto, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of peroxiredoxin-like protein from Sulfolobus tokodaii
To be Published
2YWX
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Crystal structure of phosphoribosylaminoimidazole carboxylase catalytic subunit from Methanocaldococcus jannaschii
Descriptor: Phosphoribosylaminoimidazole carboxylase catalytic subunit
Authors:Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of phosphoribosylaminoimidazole carboxylase catalytic subunit from Methanocaldococcus jannaschii
To be Published
2YX5
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BU of 2yx5 by Molmil
Crystal Structure of Methanocaldococcus jannaschii PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway
Descriptor: UPF0062 protein MJ1593
Authors:Kanagawa, M, Baba, S, Agari, Y, Chen, L.Q, Fu, Z.-Q, Chrzas, J, Wang, B.C, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-24
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Methanocaldococcus jannaschii PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway
To be Published
2YX9
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Crystal structure of D298K copper amine oxidase from Arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Yamaguchi, H, Tanizawa, K.
Deposit date:2007-04-25
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Trapping of a dopaquinone intermediate in the TPQ cofactor biogenesis in a copper-containing amine oxidase from Arthrobacter globiformis.
J.Am.Chem.Soc., 129, 2007
2YYH
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BU of 2yyh by Molmil
Crystal structure of Nudix family protein from Aquifex aeolicus
Descriptor: 8-OXO-dGTPase domain
Authors:Nakagawa, N, Kishishita, S, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-30
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Nudix family protein from Aquifex aeolicus
To be Published
2Z13
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BU of 2z13 by Molmil
Crystal structure of the N-terminal DUF1126 in human EF-hand domain
Descriptor: EF-hand domain-containing family member C2
Authors:Saito, K, Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of the N-terminal DUF1126 in human EF-hand domain
To be Published
1NG7
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BU of 1ng7 by Molmil
The Solution Structure of the Soluble Domain of Poliovirus 3A Protein
Descriptor: Genome polyprotein [Core protein P3A]
Authors:Strauss, D.M, Glustrom, L.W, Wuttke, D.S.
Deposit date:2002-12-16
Release date:2003-07-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Towards an understanding of the poliovirus replication complex: the solution structure of the soluble domain of the poliovirus 3A protein.
J.Mol.Biol., 330, 2003
2YWI
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Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
Descriptor: Hypothetical conserved protein
Authors:Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
to be published

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