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2PNH
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BU of 2pnh by Molmil
Escherichia coli PriB E39A variant
Descriptor: Primosomal replication protein n
Authors:Lopper, M.E, Keck, J.L.
Deposit date:2007-04-24
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A hand-off mechanism for primosome assembly in replication restart.
Mol.Cell, 26, 2007
4YV6
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BU of 4yv6 by Molmil
X-ray crystal structure of Streptococcus dysgalactiae SHP pheromone receptor Rgg2
Descriptor: SULFATE ION, Transcriptional regulator
Authors:Neiditch, M.B, Parashar, V.
Deposit date:2015-03-19
Release date:2015-04-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.053 Å)
Cite:Rgg protein structure-function and inhibition by cyclic peptide compounds.
Proc.Natl.Acad.Sci.USA, 112, 2015
1JUM
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BU of 1jum by Molmil
Crystal structure of the multidrug binding transcriptional repressor QacR bound to the natural drug berberine
Descriptor: BERBERINE, HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'REGION, SULFATE ION
Authors:Schumacher, M.A, Miller, M.C, Grkovic, S, Brown, M.H, Skurray, R.A, Brennan, R.G.
Deposit date:2001-08-24
Release date:2001-12-12
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structural mechanisms of QacR induction and multidrug recognition.
Science, 294, 2001
5D1W
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BU of 5d1w by Molmil
Crystal structure of Mycobacterium tuberculosis Rv3249c transcriptional regulator.
Descriptor: PALMITIC ACID, Rv3249c transcriptional regulator
Authors:Chou, T.-H, Delmar, J, Su, C.-C, Yu, E.
Deposit date:2015-08-04
Release date:2015-09-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:Structural Basis for the Regulation of the MmpL Transporters of Mycobacterium tuberculosis.
J.Biol.Chem., 290, 2015
2KHL
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BU of 2khl by Molmil
Refined solution structure of Methanosarcina thermophila protein MC1
Descriptor: Chromosomal protein MC1
Authors:Paquet, F, Meudal, H, Culard, F, Lancelot, G.
Deposit date:2009-04-08
Release date:2009-05-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Refined solution structure and backbone dynamics of the archaeal MC1 protein
Febs J., 277, 2010
2OQ4
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BU of 2oq4 by Molmil
Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (E2Q) in complex with AP-site containing DNA substrate
Descriptor: 5'-D(*C*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3', 5'-D(*G*GP*CP*TP*TP*CP*AP*TP*CP*CP*TP*GP*G)-3', Endonuclease VIII, ...
Authors:Golan, G, Zharkov, D.O, Grollman, A.P, Shoahm, G.
Deposit date:2007-01-31
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Active site plasticity of endonuclease VIII: Conformational changes compensating for different substrates and mutations of critical residues
To be Published
2OPF
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BU of 2opf by Molmil
Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (R252A) in complex with AP-site containing DNA substrate
Descriptor: 5'-D(*GP*GP*CP*TP*TP*CP*AP*TP*CP*CP*TP*G)-3', 5'-D(P*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3', Endonuclease VIII, ...
Authors:Golan, G, Zharov, D.O, Grollman, A.P, Shoham, G.
Deposit date:2007-01-29
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Active site plasticity of endonuclease VIII: Conformational changes compensating for different substrates and mutations of critical residues
To be Published
5D1R
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BU of 5d1r by Molmil
Crystal structure of Mycobacterium tuberculosis Rv1816 transcriptional regulator.
Descriptor: MAGNESIUM ION, NICKEL (II) ION, Rv1816 transcriptional regulator, ...
Authors:Chou, T.-H, Delmar, J, Su, C.-C, Yu, E.
Deposit date:2015-08-04
Release date:2015-09-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for the Regulation of the MmpL Transporters of Mycobacterium tuberculosis.
J.Biol.Chem., 290, 2015
3GN5
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BU of 3gn5 by Molmil
Structure of the E. coli protein MqsA (YgiT/b3021)
Descriptor: GLYCEROL, HTH-type transcriptional regulator MQSA (YGIT/b3021), ZINC ION
Authors:Brown, B.L, Arruda, J.M, Peti, W, Page, R.
Deposit date:2009-03-16
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Three dimensional structure of the MqsR:MqsA complex: a novel TA pair comprised of a toxin homologous to RelE and an antitoxin with unique properties.
Plos Pathog., 5, 2009
6KVN
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BU of 6kvn by Molmil
Crystal structure of chloroplast resolvase
Descriptor: NtMOC1
Authors:Yan, J.J, Hong, S.X, Guan, Z.Y, Yin, P.
Deposit date:2019-09-05
Release date:2020-04-08
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural insights into sequence-dependent Holliday junction resolution by the chloroplast resolvase MOC1.
Nat Commun, 11, 2020
5E5A
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BU of 5e5a by Molmil
Crystal structure of the chromatin-tethering domain of Human cytomegalovirus IE1 protein bound to the nucleosome core particle
Descriptor: C-terminal domain of Regulatory protein IE1, DNA (146-MER), Histone H2A, ...
Authors:Fang, Q, Chen, P, Wang, M, Fang, J, Yang, N, Li, G, Xu, R.M.
Deposit date:2015-10-08
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.809 Å)
Cite:Human cytomegalovirus IE1 protein alters the higher-order chromatin structure by targeting the acidic patch of the nucleosome
Elife, 5, 2016
1IG6
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BU of 1ig6 by Molmil
HUMAN MRF-2 DOMAIN, NMR, 11 STRUCTURES
Descriptor: MODULATOR RECOGNITION FACTOR 2
Authors:Lin, D, Tsui, V, Case, D, Yuan, Y.C, Chen, Y.
Deposit date:2001-04-17
Release date:2001-04-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:HUMAN MRF-2 DOMAIN, NMR, 11 STRUCTURES
To be Published
6OD7
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BU of 6od7 by Molmil
Herpes simplex virus type 1 (HSV-1) pUL6 portal protein, dodecameric complex
Descriptor: Portal protein
Authors:Liu, Y.T, Jih, J, Dai, X.H, Bi, G.Q, Zhou, Z.H.
Deposit date:2019-03-26
Release date:2019-06-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome.
Nature, 570, 2019
5HXB
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BU of 5hxb by Molmil
Cereblon in complex with DDB1, CC-885, and GSPT1
Descriptor: 1-(3-chloro-4-methylphenyl)-3-({2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-5-yl}methyl)urea, DNA damage-binding protein 1, Eukaryotic peptide chain release factor GTP-binding subunit ERF3A, ...
Authors:Chamberlain, P.P, Matyskiela, M, Pagarigan, B.
Deposit date:2016-01-30
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:A novel cereblon modulator recruits GSPT1 to the CRL4(CRBN) ubiquitin ligase.
Nature, 535, 2016
6LCM
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BU of 6lcm by Molmil
Crystal structure of chloroplast resolvase ZmMOC1 with the magic triangle I3C
Descriptor: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, ZmMoc1
Authors:Yan, J.J, Hong, S.X, Guan, Z.Y, Yin, P.
Deposit date:2019-11-19
Release date:2020-04-08
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into sequence-dependent Holliday junction resolution by the chloroplast resolvase MOC1.
Nat Commun, 11, 2020
6L0C
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BU of 6l0c by Molmil
Crystal structure of HIV-1 Integrase catalytic core domain (A128T/K173Q/F185K)
Descriptor: ARSENIC, Integrase, SULFATE ION
Authors:Nakamura, T, Nakamura, T.
Deposit date:2019-09-26
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:A Conformational Escape Reaction of HIV-1 against an Allosteric Integrase Inhibitor.
J.Virol., 94, 2020
6DKA
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BU of 6dka by Molmil
Yeast Ddi2 Cyanamide Hydratase
Descriptor: CYANAMIDE, DNA damage-inducible protein, SULFATE ION, ...
Authors:Moore, S.A, Xiao, W, Li, J.
Deposit date:2018-05-29
Release date:2019-05-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structure of Ddi2, a highly inducible detoxifying metalloenzyme fromSaccharomyces cerevisiae.
J.Biol.Chem., 294, 2019
1PCZ
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BU of 1pcz by Molmil
STRUCTURE OF TATA-BINDING PROTEIN
Descriptor: TATA-BINDING PROTEIN
Authors:Dedecker, B.S, Sigler, P.B.
Deposit date:1996-10-04
Release date:1997-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of a hyperthermophilic archaeal TATA-box binding protein.
J.Mol.Biol., 264, 1996
5EXT
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BU of 5ext by Molmil
AAA+ domain of FleQ from Pseudomonas aeruginosa bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transcriptional regulator FleQ
Authors:Navarro, M.V.A.S, Sondermann, H, Matsuyama, B.Y.
Deposit date:2015-11-24
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 113, 2016
5EXP
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BU of 5exp by Molmil
AAA+ domain of FleQ from Pseudomonas aeruginosa
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Transcriptional regulator FleQ
Authors:Navarro, M.V.A.S, Sondermann, H, Matsuyama, B.Y.
Deposit date:2015-11-24
Release date:2016-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 113, 2016
5ODG
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BU of 5odg by Molmil
Crystal structure of Smad3-MH1 bound to the GGCT site.
Descriptor: CHLORIDE ION, DNA (5'-D(P*CP*AP*GP*GP*CP*TP*AP*GP*CP*CP*TP*GP*CP*A)-3'), Mothers against decapentaplegic homolog 3, ...
Authors:Kaczmarska, Z, Marquez, J.A, Macias, M.J.
Deposit date:2017-07-05
Release date:2017-11-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors.
Nat Commun, 8, 2017
5EXS
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BU of 5exs by Molmil
AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to ATP-gamma-S
Descriptor: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transcriptional regulator FleQ
Authors:Navarro, M.V.A.S, Sondermann, H, Matsuyama, B.
Deposit date:2015-11-24
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 113, 2016
4B0A
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BU of 4b0a by Molmil
The high-resolution structure of yTBP-yTAF1 identifies conserved and competing interaction surfaces in transcriptional activation
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Anandapadamanaban, M, Andresen, C, Siponen, M, Kokubo, T, Ikura, M, Moche, M, Sunnerhagen, M.
Deposit date:2012-06-29
Release date:2013-07-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:High-Resolution Structure of TBP with Taf1 Reveals Anchoring Patterns in Transcriptional Regulation
Nat.Struct.Mol.Biol., 20, 2013
7XL9
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BU of 7xl9 by Molmil
The structure of HucR with urate
Descriptor: CHLORIDE ION, Transcriptional regulator, MarR family, ...
Authors:Park, S.Y.
Deposit date:2022-04-21
Release date:2022-07-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:The structure of Deinococcus radiodurans transcriptional regulator HucR retold with the urate bound.
Biochem.Biophys.Res.Commun., 615, 2022
6FHS
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BU of 6fhs by Molmil
CryoEM Structure of INO80core
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Arp5, ...
Authors:Eustermann, S, Schall, K, Kostrewa, D, Strauss, M, Hopfner, K.
Deposit date:2018-01-15
Release date:2018-04-25
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.754 Å)
Cite:Structural basis for ATP-dependent chromatin remodelling by the INO80 complex.
Nature, 556, 2018

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