Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2BTW
DownloadVisualize
BU of 2btw by Molmil
Crystal structure of Alr0975
Descriptor: ALR0975 PROTEIN, CALCIUM ION
Authors:Vivares, D, Arnoux, P, Pignol, D.
Deposit date:2005-06-07
Release date:2005-12-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Papain-Like Enzyme at Work: Native and Acyl- Enzyme Intermediate Structures in Phytochelatin Synthesis.
Proc.Natl.Acad.Sci.USA, 102, 2005
2K0J
DownloadVisualize
BU of 2k0j by Molmil
Solution structure of CaM complexed to DRP1p
Descriptor: CALCIUM ION, LANTHANUM (III) ION, calmodulin
Authors:Bertini, I, Luchinat, C, Parigi, G, Yuan, J, Structural Proteomics in Europe (SPINE)
Deposit date:2008-02-04
Release date:2009-03-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Accurate solution structures of proteins from X-ray data and a minimal set of NMR data: calmodulin-peptide complexes as examples.
J.Am.Chem.Soc., 131, 2009
7QB3
DownloadVisualize
BU of 7qb3 by Molmil
Solution structure of a lanthanide-binding DNA aptamer
Descriptor: LUTETIUM (III) ION, Lanthanide-binding aptamer
Authors:Andralojc, W, Gdaniec, Z.
Deposit date:2021-11-18
Release date:2021-12-01
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution Structure of a Lanthanide-binding DNA Aptamer Determined Using High Quality pseudocontact shift restraints.
Chemistry, 28, 2022
7KLD
DownloadVisualize
BU of 7kld by Molmil
Crystal Structure of an Essential Ribosomal Processing Protease Prp from S. aureus in complex with a covalently linked product Peptide
Descriptor: CALCIUM ION, LYS-LEU-ASN-LEU-GLN-PHE-PCS, Phage-related ribosomal protease
Authors:Wright, H.T, Peterson, D.
Deposit date:2020-10-29
Release date:2021-09-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Phage-Related Ribosomal Protease (Prp) of Staphylococcus aureus : In Vitro Michaelis-Menten Kinetics, Screening for Inhibitors, and Crystal Structure of a Covalent Inhibition Product Complex.
Biochemistry, 61, 2022
2XY8
DownloadVisualize
BU of 2xy8 by Molmil
Paramagnetic-based NMR structure of the complex between the N- terminal epsilon domain and the theta domain of the DNA polymerase III
Descriptor: CALCIUM ION, DNA POLYMERASE III SUBUNIT EPSILON, DNA POLYMERASE III SUBUNIT THETA
Authors:Schmitz, C, Bonvin, A.M.J.J.
Deposit date:2010-11-16
Release date:2011-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Protein-Protein Haddocking Using Exclusively Pseudocontact Shifts.
J.Biomol.NMR, 50, 2011
2M66
DownloadVisualize
BU of 2m66 by Molmil
Endoplasmic reticulum protein 29 (ERp29) C-terminal domain: 3D Protein Fold Determination from Backbone Amide Pseudocontact Shifts Generated by Lanthanide Tags at Multiple Sites
Descriptor: Endoplasmic reticulum resident protein 29
Authors:Yagi, H, Pilla, K, Maleckis, A, Graham, B, Huber, T, Otting, G.
Deposit date:2013-03-26
Release date:2013-07-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional protein fold determination from backbone amide pseudocontact shifts generated by lanthanide tags at multiple sites
Structure, 21, 2013
8OH7
DownloadVisualize
BU of 8oh7 by Molmil
Structure of A4M4C bound to (KR)4 Solution backbone structure refined by PCS
Descriptor: Designed Armadillo repeat protein with four internal modules
Authors:Cucuzza, S, Zerbe, O.
Deposit date:2023-03-20
Release date:2023-12-13
Method:SOLUTION NMR
Cite:Unexpected dynamics in femtomolar complexes of binding proteins with peptides.
Nat Commun, 14, 2023
5T1N
DownloadVisualize
BU of 5t1n by Molmil
Solution-state NMR structural ensemble of NPr (1-85) refined with RDCs and PCS
Descriptor: Phosphocarrier protein NPr
Authors:Strickland, M, Wang, G, Peterkofsky, A, Tjandra, N.
Deposit date:2016-08-19
Release date:2016-11-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the NPr:EIN(Ntr) Complex: Mechanism for Specificity in Paralogous Phosphotransferase Systems.
Structure, 24, 2016
6EPF
DownloadVisualize
BU of 6epf by Molmil
Ground state 26S proteasome (GS1)
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 13, ...
Authors:Guo, Q, Lehmer, C, Martinez-Sanchez, A, Rudack, T, Beck, F, Hartmann, H, Hipp, M.S, Hartl, F.U, Edbauer, D, Baumeister, W, Fernandez-Busnadiego, R.
Deposit date:2017-10-11
Release date:2018-02-07
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (11.8 Å)
Cite:In Situ Structure of Neuronal C9orf72 Poly-GA Aggregates Reveals Proteasome Recruitment.
Cell, 172, 2018
6EPE
DownloadVisualize
BU of 6epe by Molmil
Substrate processing state 26S proteasome (SPS2)
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 13, ...
Authors:Guo, Q, Lehmer, C, Martinez-Sanchez, A, Rudack, T, Beck, F, Hartmann, H, Hipp, M.S, Hartl, F.U, Edbauer, D, Baumeister, W, Fernandez-Busnadiego, R.
Deposit date:2017-10-11
Release date:2018-02-07
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (12.8 Å)
Cite:In Situ Structure of Neuronal C9orf72 Poly-GA Aggregates Reveals Proteasome Recruitment.
Cell, 172, 2018
5XSV
DownloadVisualize
BU of 5xsv by Molmil
Crystal structure of an archaeal chitinase in the ligand-free form
Descriptor: COBALT (II) ION, Chitinase, SULFATE ION
Authors:Nishitani, Y, Miki, K.
Deposit date:2017-06-15
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.723 Å)
Cite:Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
5XSX
DownloadVisualize
BU of 5xsx by Molmil
Crystal structure of an archaeal chitinase in the substrate-complex form (P212121)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase, GLYCEROL, ...
Authors:Nishitani, Y, Miki, K.
Deposit date:2017-06-15
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.642 Å)
Cite:Crystal structures of an archaeal chitinase ChiD and its ligand complexes.
Glycobiology, 28, 2018
5T0I
DownloadVisualize
BU of 5t0i by Molmil
Structural basis for dynamic regulation of the human 26S proteasome
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
Authors:Chen, S, Wu, J, Lu, Y, Ma, Y.B, Lee, B.H, Yu, Z, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
Deposit date:2016-08-16
Release date:2016-10-19
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Structural basis for dynamic regulation of the human 26S proteasome.
Proc.Natl.Acad.Sci.USA, 113, 2016
5T0C
DownloadVisualize
BU of 5t0c by Molmil
Structural basis for dynamic regulation of the human 26S proteasome
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
Authors:Chen, S, Wu, J, Lu, Y, Ma, Y.B, Lee, B.H, Yu, Z, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
Deposit date:2016-08-15
Release date:2016-10-19
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for dynamic regulation of the human 26S proteasome.
Proc.Natl.Acad.Sci.USA, 113, 2016
5T0J
DownloadVisualize
BU of 5t0j by Molmil
Structural basis for dynamic regulation of the human 26S proteasome
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
Authors:Chen, S, Wu, J, Lu, Y, Ma, Y.B, Lee, B.H, Yu, Z, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
Deposit date:2016-08-16
Release date:2016-10-19
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Structural basis for dynamic regulation of the human 26S proteasome.
Proc.Natl.Acad.Sci.USA, 113, 2016
5T0G
DownloadVisualize
BU of 5t0g by Molmil
Structural basis for dynamic regulation of the human 26S proteasome
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
Authors:Chen, S, Wu, J, Lu, Y, Ma, Y.B, Lee, B.H, Yu, Z, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
Deposit date:2016-08-16
Release date:2016-10-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural basis for dynamic regulation of the human 26S proteasome.
Proc.Natl.Acad.Sci.USA, 113, 2016
5T0H
DownloadVisualize
BU of 5t0h by Molmil
Structural basis for dynamic regulation of the human 26S proteasome
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
Authors:Chen, S, Wu, J, Lu, Y, Ma, Y.B, Lee, B.H, Yu, Z, Ouyang, Q, Finley, D, Kirschner, M.W, Mao, Y.
Deposit date:2016-08-16
Release date:2016-10-19
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Structural basis for dynamic regulation of the human 26S proteasome.
Proc.Natl.Acad.Sci.USA, 113, 2016
2JXM
DownloadVisualize
BU of 2jxm by Molmil
Ensemble of twenty structures of the Prochlorothrix hollandica plastocyanin- cytochrome f complex
Descriptor: COPPER (II) ION, Cytochrome f, HEME C, ...
Authors:Hulsker, R, Baranova, M, Bullerjahn, G, Ubbink, M.
Deposit date:2007-11-22
Release date:2008-02-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Dynamics in the transient complex of plastocyanin-cytochrome f from Prochlorothrix hollandica.
J.Am.Chem.Soc., 130, 2008
4CR4
DownloadVisualize
BU of 4cr4 by Molmil
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
Authors:Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F.
Deposit date:2014-02-25
Release date:2014-04-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 111, 2014
4CR2
DownloadVisualize
BU of 4cr2 by Molmil
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
Authors:Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F.
Deposit date:2014-02-25
Release date:2014-04-02
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 111, 2014
4CR3
DownloadVisualize
BU of 4cr3 by Molmil
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
Authors:Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F.
Deposit date:2014-02-25
Release date:2014-04-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9.3 Å)
Cite:Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 111, 2014
7BHO
DownloadVisualize
BU of 7bho by Molmil
DNA origami signpost designed model
Descriptor: DNA, DNA scaffold
Authors:Silvester, E, Vollmer, B, Prazak, V, Vasishtan, D, Machala, E.A, Whittle, C, Black, S, Bath, J, Turberfield, A.J, Gruenewald, K, Baker, L.A.
Deposit date:2021-01-11
Release date:2021-04-14
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (36.439999 Å)
Cite:DNA origami signposts for identifying proteins on cell membranes by electron cryotomography.
Cell, 184, 2021
1ULZ
DownloadVisualize
BU of 1ulz by Molmil
Crystal structure of the biotin carboxylase subunit of pyruvate carboxylase
Descriptor: pyruvate carboxylase n-terminal domain
Authors:Kondo, S, Nakajima, Y, Sugio, S, Yong-Biao, J, Sueda, S, Kondo, H.
Deposit date:2003-09-18
Release date:2004-03-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the biotin carboxylase subunit of pyruvate carboxylase from Aquifex aeolicus at 2.2 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
5TOU
DownloadVisualize
BU of 5tou by Molmil
STRUCTURE OF C-PHYCOCYANIN FROM ARCTIC PSEUDANABAENA SP. LW0831
Descriptor: PHYCOCYANOBILIN, Phycocyanin alpha-1 subunit, Phycocyanin beta-1 subunit
Authors:Wang, Q.M, Li, C.Y, Su, H.N, Zhang, Y.Z, Xie, B.B.
Deposit date:2016-10-18
Release date:2017-03-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural insights into the cold adaptation of the photosynthetic pigment-protein C-phycocyanin from an Arctic cyanobacterium
Biochim. Biophys. Acta, 1858, 2017
7QXX
DownloadVisualize
BU of 7qxx by Molmil
Proteasome-ZFAND5 Complex Z+E state
Descriptor: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ...
Authors:Zhu, Y, Lu, Y.
Deposit date:2022-01-27
Release date:2023-02-08
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Molecular mechanism for activation of the 26S proteasome by ZFAND5.
Mol.Cell, 83, 2023

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon