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3PBD
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BU of 3pbd by Molmil
Endothiapepsin in complex with a fragment
Descriptor: 1H-isoindol-3-amine, Endothiapepsin, GLYCEROL
Authors:Koester, H, Heine, A, Klebe, G.
Deposit date:2010-10-20
Release date:2011-10-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
1I56
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BU of 1i56 by Molmil
SOLUTION STRUCTURE OF CA2+-BOUND STATE OF CANINE MILK LYSOZYME
Descriptor: LYSOZYME C
Authors:Kobashigawa, Y, Tsuda, S, Nitta, K.
Deposit date:2001-02-25
Release date:2002-02-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of Ca2+-bound state of canine milk lysozyme
To be Published
2X77
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BU of 2x77 by Molmil
Crystal Structure of Leishmania major ADP ribosylation factor-like 1.
Descriptor: ADP-RIBOSYLATION FACTOR, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Fleming, J.R, Dawson, A, Hunter, W.N.
Deposit date:2010-02-24
Release date:2010-03-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Leishmania Major Adp Ribosylation Factor-Like 1 and a Classification of Related Gtpase Family Members in This Kinetoplastid.
Mol.Biochem.Parasitol., 174, 2010
4DWU
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BU of 4dwu by Molmil
Carbonmonoxy dehaloperoxidase-hemoglobin A structure at 1.44 Angstrom resolution
Descriptor: CARBON MONOXIDE, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:de Serrano, V.S, Zhao, J, Franzen, S.
Deposit date:2012-02-26
Release date:2013-02-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:A unique role for the distal histidine observed in carbonmonoxy dehaloperoxidase-hemoglobin A structures
To be Published
4J61
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BU of 4j61 by Molmil
Crystal structure of Ribonuclease A soaked in 40% Cyclopentanone: One of twelve in MSCS set
Descriptor: Ribonuclease pancreatic, SULFATE ION, cyclopentanone
Authors:Kearney, B.M, Dechene, M, Swartz, P.D, Mattos, C.
Deposit date:2013-02-11
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:DRoP: A program for analysis of water structure on protein surfaces
to be published
4J66
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BU of 4j66 by Molmil
Crystal structure of Ribonuclease A soaked in 25% Dimethyl sulfoxide: One of twelve in MSCS set
Descriptor: DIMETHYL SULFOXIDE, Ribonuclease pancreatic, SULFATE ION
Authors:Kearney, B.M, Dechene, M, Swartz, P.D, Mattos, C.
Deposit date:2013-02-11
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.039 Å)
Cite:DRoP: A program for analysis of water structure on protein surfaces
to be published
3PCZ
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BU of 3pcz by Molmil
Endothiapepsin in complex with benzamidine
Descriptor: BENZAMIDINE, DIMETHYL SULFOXIDE, Endothiapepsin
Authors:Koester, H, Heine, A, Klebe, G.
Deposit date:2010-10-22
Release date:2011-10-19
Last modified:2021-08-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Experimental and computational active site mapping as a starting point to fragment-based lead discovery.
Chemmedchem, 7, 2012
4J6P
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BU of 4j6p by Molmil
Crystal structure of calcium2+-free wild-type CD23 lectin domain (crystal form F)
Descriptor: Low affinity immunoglobulin epsilon Fc receptor
Authors:Dhaliwal, B, Yuan, D, Sutton, B.J.
Deposit date:2013-02-11
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational plasticity at the IgE-binding site of the B-cell receptor CD23.
Mol.Immunol., 56, 2013
4J7V
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BU of 4j7v by Molmil
Crystal structure of cross-linked hen egg white lysozyme soaked with 5mM [Ru(benzene)Cl2]2
Descriptor: Benzeneruthenium(II) chloride, CHLORIDE ION, Lysozyme C, ...
Authors:Tabe, H, Abe, S, Hikage, T, Kitagawa, S, Ueno, T.
Deposit date:2013-02-14
Release date:2014-02-19
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Solid Artificial Metalloenzymes: Post-Engineering of Porous Protein Crystals by Organometallic Complexes
To be Published
3PEL
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BU of 3pel by Molmil
Structure of Greyhound Hemoglobin: Origin of High Oxygen Affinity
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bhatt, V.S, Zaldivar-Lopez, S, Harris, D.R, Couto, C.G, Wang, P.G, Palmer, A.F.
Deposit date:2010-10-26
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Greyhound hemoglobin: origin of high oxygen affinity.
Acta Crystallogr.,Sect.D, 67, 2011
3PEP
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BU of 3pep by Molmil
REVISED 2.3 ANGSTROMS STRUCTURE OF PORCINE PEPSIN. EVIDENCE FOR A FLEXIBLE SUBDOMAIN
Descriptor: ETHANOL, PEPSIN
Authors:Abad-Zapatero, C, Erickson, J.W.
Deposit date:1989-10-24
Release date:1990-04-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Revised 2.3 A structure of porcine pepsin: evidence for a flexible subdomain
Proteins, 8, 1990
4JJD
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BU of 4jjd by Molmil
Crystal structure of the N114A Abl-SH3 domain mutant at pH4
Descriptor: DI(HYDROXYETHYL)ETHER, SODIUM ION, Tyrosine-protein kinase ABL1
Authors:Camara-Artigas, A, Martin-Garcia, J.M.
Deposit date:2013-03-07
Release date:2014-03-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the Abl-SH3 domain at pH5
To be Published
3PBZ
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BU of 3pbz by Molmil
Endothiapepsin in complex with a fragment
Descriptor: 4-(diethylamino)benzohydrazide, DIMETHYL SULFOXIDE, Endothiapepsin, ...
Authors:Koester, H, Heine, A, Klebe, G.
Deposit date:2010-10-21
Release date:2011-10-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
2WY1
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BU of 2wy1 by Molmil
Crystal structure of rat angiotensinogen in P321 space group
Descriptor: ANGIOTENSINOGEN
Authors:Zhou, A, Wei, Z, Carrell, R.W, Read, R.J.
Deposit date:2009-11-11
Release date:2010-10-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:A Redox Switch in Angiotensinogen Modulates Angiotensin Release.
Nature, 468, 2010
2WJO
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BU of 2wjo by Molmil
human Bace (beta secretase) in complex with Cyclohexanecarboxylic acid (2-(2-am ino-6-phenoxy-4H-quinazolin-3-yl)-2 -cyclohexyl-ethyl)- amide
Descriptor: 2-AMINO-3-{(1R)-1-CYCLOHEXYL-2-[(CYCLOHEXYLCARBONYL)AMINO]ETHYL}-6-PHENOXYQUINAZOLIN-3-IUM, BETA-SECRETASE 1
Authors:Mathieu, M, Dupuy, A.S.
Deposit date:2009-05-28
Release date:2010-03-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Shape and Medicinal Chemistry: A Perspective.
J.Med.Chem., 53, 2010
3O89
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BU of 3o89 by Molmil
Crystal Structure of Sperm Whale Myoglobin G65T
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Huang, X, Lovelace, L, Lebioda, L.
Deposit date:2010-08-02
Release date:2011-12-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Investigations of Structural Factors that Influence the Mechanism of Halophenol Dehalogenation using 'Peroxidase-Like' Myoglobin mutants and 'Myoglobin-Like' Amphitrite ornata Dehaloperoxidase Mutants
TO BE PUBLISHED
7Y1G
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BU of 7y1g by Molmil
Crystal structure of human PRKACA complexed with DS01080522
Descriptor: 1-chloranyl-~{N}-[(~{S})-(3-chloranyl-4-cyano-phenyl)-[(2~{R},4~{S})-4-oxidanylpyrrolidin-2-yl]methyl]-7-methoxy-isoquinoline-6-carboxamide, ZINC ION, cAMP-dependent protein kinase catalytic subunit alpha
Authors:Suzuki, M, Ubukata, O, Toyoda, A.
Deposit date:2022-06-08
Release date:2022-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Novel protein kinase cAMP-Activated Catalytic Subunit Alpha (PRKACA) inhibitor shows anti-tumor activity in a fibrolamellar hepatocellular carcinoma model.
Biochem.Biophys.Res.Commun., 621, 2022
4JN4
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BU of 4jn4 by Molmil
Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Chaperone protein DnaK, GLYCEROL, ...
Authors:Qi, R, Sarbeng, E.B, Liu, Q, Le, K.Q, Xu, X, Xu, H, Yang, J, Wong, J.L, Vorvis, C, Hendrickson, W.A, Zhou, L, Liu, Q.
Deposit date:2013-03-14
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Allosteric opening of the polypeptide-binding site when an Hsp70 binds ATP.
Nat.Struct.Mol.Biol., 20, 2013
3O9H
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BU of 3o9h by Molmil
Crystal Structure of wild-type HIV-1 Protease in complex with kd26
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(1S,2R)-3-[(1,3-benzodioxol-5-ylsulfonyl)(2-ethylbutyl)amino]-1-benzyl-2-hydroxypropyl}carbamate, ACETATE ION, PHOSPHATE ION, ...
Authors:Schiffer, C.A, Nalam, M.N.L.
Deposit date:2010-08-04
Release date:2011-08-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Substrate envelope-designed potent HIV-1 protease inhibitors to avoid drug resistance.
Chem.Biol., 20, 2013
7Y6M
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BU of 7y6m by Molmil
Intracellular Subtilisin from Bacillus sp.
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Intracellular serine protease
Authors:Hussin, N, Jamaluddin, H, Jonet, M.A.
Deposit date:2022-06-21
Release date:2022-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Intracellular Subtilisin from Bacillus sp.
TO BE PUBLISHED
4BEL
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BU of 4bel by Molmil
BACE2 XAPERONE COMPLEX
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-SECRETASE 2, CHLORIDE ION, ...
Authors:Banner, D.W, Kuglstatter, A, Benz, J, Stihle, M, Ruf, A.
Deposit date:2013-03-11
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mapping the Conformational Space Accessible to Bace2 Using Surface Mutants and Co-Crystals with Fab-Fragments, Fynomers, and Xaperones
Acta Crystallogr.,Sect.D, 69, 2013
2WXW
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BU of 2wxw by Molmil
Crystal structure of human angiotensinogen
Descriptor: ANGIOTENSINOGEN
Authors:Zhou, A, Wei, Z, Carrell, R.W, Read, R.J.
Deposit date:2009-11-11
Release date:2010-10-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A Redox Switch in Angiotensinogen Modulates Angiotensin Release.
Nature, 468, 2010
2WTG
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BU of 2wtg by Molmil
High resolution 3D structure of C.elegans globin-like protein GLB-1
Descriptor: GLOBIN-LIKE PROTEIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Geuens, E, Hoogewijs, D, Nardini, M, Vinck, E, Pesce, A, Kiger, L, Fago, A, Tilleman, L, De Henau, S, Marden, M, Weber, R.E, Van Doorslaer, S, Vanfleteren, J, Moens, L, Bolognesi, M, Dewilde, S.
Deposit date:2009-09-16
Release date:2010-04-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Globin-Like Proteins in Caenorhabditis Elegans: In Vivo Localization, Ligand Binding and Structural Properties.
Bmc Biochem., 11, 2010
4DI2
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BU of 4di2 by Molmil
Crystal structure of BACE1 in complex with hydroxyethylamine inhibitor 37
Descriptor: (2R)-N-{(2S,3R)-4-{[(4'S)-6'-(2,2-dimethylpropyl)-3',4'-dihydrospiro[cyclobutane-1,2'-pyrano[2,3-b]pyridin]-4'-yl]amino}-3-hydroxy-1-[3-(1,3-thiazol-2-yl)phenyl]butan-2-yl}-2-methoxypropanamide, Beta-secretase 1, GLYCEROL
Authors:Whittington, D.A, Long, A.M.
Deposit date:2012-01-30
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and synthesis of potent, orally efficacious hydroxyethylamine derived beta-site amyloid precursor protein cleaving enzyme (BACE1) inhibitors.
J.Med.Chem., 55, 2012
2X1A
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BU of 2x1a by Molmil
Structure of Rna15 RRM with RNA bound (G)
Descriptor: 5'-R(*GP*UP*UP*GP*UP)-3', MAGNESIUM ION, MRNA 3'-END-PROCESSING PROTEIN RNA15
Authors:Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
Deposit date:2010-01-06
Release date:2010-02-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010

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